RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 ADH7P40394 386 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 TBC1D8BQ0IIM8 1120 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 ELOA3BQ3SY89 546 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 NXPE4Q6UWF7 544 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 SLCO4C1Q6ZQN7 724 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 CCNJLQ8IV13 435 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 TMEM102Q8N9M5 508 aaPredicted RBP8.11□□□□□ -1.11
RFC4-212ENST00000479307 ELOA3Q8NG57 546 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 OXCT2Q9BYC2 517 aaPredicted RBP8.11□□□□□ -1.11
RFC4-212ENST00000479307 ZFYVE1Q9HBF4 777 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 METTL5Q9NRN9 209 aaKnown RBP8.11□□□□□ -1.11
RFC4-212ENST00000479307 KLF15Q9UIH9 416 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 GGA1Q9UJY5 639 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 SLC6A14Q9UN76 642 aa8.11□□□□□ -1.11
RFC4-212ENST00000479307 SMARCA2P51531 1590 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 FAM181BA6NEQ2 426 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 NEURL1BA8MQ27 555 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 EIF2AK2P19525 551 aaKnown RBP8.1□□□□□ -1.11
RFC4-212ENST00000479307 MLLT1Q03111 559 aaPredicted RBP8.1□□□□□ -1.11
RFC4-212ENST00000479307 RNFT1Q5M7Z0 435 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 FAM35AQ86V20 835 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 FCHSD1Q86WN1 690 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 TMEM87AQ8NBN3 555 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 GLIS3Q8NEA6 775 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 PBX4Q9BYU1 374 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 CNTNAP3Q9BZ76 1288 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 BHLHE41Q9C0J9 482 aaPredicted RBP8.1□□□□□ -1.11
RFC4-212ENST00000479307 LIN7BQ9HAP6 207 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 FRRS1LQ9P0K9 344 aa8.1□□□□□ -1.11
RFC4-212ENST00000479307 J3QW42 95 aa8.09□□□□□ -1.11
RFC4-212ENST00000479307 SMNDC1O75940 238 aaKnown RBP eCLIP8.09□□□□□ -1.11
RFC4-212ENST00000479307 CTSHP09668 335 aa8.09□□□□□ -1.11
RFC4-212ENST00000479307 USP17L7P0C7H9 530 aa8.09□□□□□ -1.11
RFC4-212ENST00000479307 ALAS2P22557 587 aa8.09□□□□□ -1.11
RFC4-212ENST00000479307 GMPRP36959 345 aa8.09□□□□□ -1.11
RFC4-212ENST00000479307 TCF12Q99081 682 aa8.09□□□□□ -1.11
RFC4-212ENST00000479307 RIMBP3CA6NJZ7 1639 aa8.09□□□□□ -1.11
RFC4-212ENST00000479307 RIMBP3BA6NNM3 1639 aa8.09□□□□□ -1.11
RFC4-212ENST00000479307 RIMBP3Q9UFD9 1639 aa8.09□□□□□ -1.11
RFC4-212ENST00000479307 HMGXB3Q12766 1538 aa8.08□□□□□ -1.12
RFC4-212ENST00000479307 NFKBIEO00221 500 aa8.08□□□□□ -1.12
RFC4-212ENST00000479307 PDE2AO00408 941 aaPredicted RBP8.08□□□□□ -1.12
RFC4-212ENST00000479307 ST13P50502 369 aaKnown RBP8.08□□□□□ -1.12
RFC4-212ENST00000479307 PTPN12Q05209 780 aaKnown RBP8.08□□□□□ -1.12
RFC4-212ENST00000479307 LDLRAD1Q5T700 205 aa8.08□□□□□ -1.12
RFC4-212ENST00000479307 HFE2Q6ZVN8 426 aa8.08□□□□□ -1.12
RFC4-212ENST00000479307 MICALL1Q8N3F8 863 aa8.08□□□□□ -1.12
RFC4-212ENST00000479307 ANKRD24Q8TF21 1146 aa8.08□□□□□ -1.12
RFC4-212ENST00000479307 RASSF4Q9H2L5 321 aa8.08□□□□□ -1.12
RFC4-212ENST00000479307 ABCB6Q9NP58 842 aa8.08□□□□□ -1.12
RFC4-212ENST00000479307 LRRC4BQ9NT99 713 aa8.08□□□□□ -1.12
RFC4-212ENST00000479307 PPM1HQ9ULR3 514 aa8.08□□□□□ -1.12
RFC4-212ENST00000479307 LAMC3Q9Y6N6 1575 aa8.08□□□□□ -1.12
RFC4-212ENST00000479307 TMEM238LA0A1B0GVL6 79 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 EPXP11678 715 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 CPB1P15086 417 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 ACPPP15309 386 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 TAF1CQ15572 869 aaPredicted RBP8.07□□□□□ -1.12
RFC4-212ENST00000479307 KANK3Q6NY19 840 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 ELMSAN1Q6PJG2 1045 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 CACTIN-AS1Q8N1I8 211 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 TTC9Q92623 222 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 NXPE3Q969Y0 559 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 PLD4Q96BZ4 506 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 NAGPAQ9UK23 515 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
RFC4-212ENST00000479307 ADAMTS2O95450 1211 aa8.06□□□□□ -1.12
RFC4-212ENST00000479307 ITPKAP23677 461 aa8.06□□□□□ -1.12
RFC4-212ENST00000479307 FCGRTP55899 365 aa8.06□□□□□ -1.12
RFC4-212ENST00000479307 ATP11AP98196 1134 aa8.06□□□□□ -1.12
RFC4-212ENST00000479307 KRT76Q01546 638 aa8.06□□□□□ -1.12
RFC4-212ENST00000479307 PERM1Q5SV97 790 aa8.06□□□□□ -1.12
RFC4-212ENST00000479307 DTHD1Q6ZMT9 781 aa8.06□□□□□ -1.12
RFC4-212ENST00000479307 ZSCAN1Q8NBB4 408 aa8.06□□□□□ -1.12
RFC4-212ENST00000479307 C3orf58Q8NDZ4 430 aa8.06□□□□□ -1.12
RFC4-212ENST00000479307 LPIN3Q9BQK8 851 aa8.06□□□□□ -1.12
RFC4-212ENST00000479307 SLURP2P0DP57 97 aa8.05□□□□□ -1.12
RFC4-212ENST00000479307 ZNF76P36508 570 aa8.05□□□□□ -1.12
RFC4-212ENST00000479307 FANCCQ00597 558 aa8.05□□□□□ -1.12
RFC4-212ENST00000479307 CEP135Q66GS9 1140 aa8.05□□□□□ -1.12
RFC4-212ENST00000479307 RNF34Q969K3 372 aa8.05□□□□□ -1.12
RFC4-212ENST00000479307 ACDQ96AP0 544 aa8.05□□□□□ -1.12
RFC4-212ENST00000479307 A0A096LPE4 126 aa8.04□□□□□ -1.12
RFC4-212ENST00000479307 A0A1W2PPZ6 126 aa8.04□□□□□ -1.12
RFC4-212ENST00000479307 PTPRAP18433 802 aa8.04□□□□□ -1.12
RFC4-212ENST00000479307 GRIA4P48058 902 aa8.04□□□□□ -1.12
RFC4-212ENST00000479307 RPS26P11Q5JNZ5 115 aaPredicted RBP8.04□□□□□ -1.12
RFC4-212ENST00000479307 PSAPL1Q6NUJ1 521 aa8.04□□□□□ -1.12
RFC4-212ENST00000479307 HHIPQ96QV1 700 aa8.04□□□□□ -1.12
RFC4-212ENST00000479307 POP1Q99575 1024 aaKnown RBP8.04□□□□□ -1.12
RFC4-212ENST00000479307 SMG9Q9H0W8 520 aaKnown RBP8.04□□□□□ -1.12
RFC4-212ENST00000479307 FAM177BA6PVY3 158 aa8.03□□□□□ -1.12
RFC4-212ENST00000479307 TRPA1O75762 1119 aa8.03□□□□□ -1.12
RFC4-212ENST00000479307 ASAP3Q8TDY4 903 aa8.03□□□□□ -1.12
RFC4-212ENST00000479307 BSNDQ8WZ55 320 aa8.03□□□□□ -1.12
RFC4-212ENST00000479307 NOC4LQ9BVI4 516 aaKnown RBP8.03□□□□□ -1.12
RFC4-212ENST00000479307 TTF2Q9UNY4 1162 aaKnown RBP8.03□□□□□ -1.12
RFC4-212ENST00000479307 WDR62O43379 1518 aa8.03□□□□□ -1.12
RFC4-212ENST00000479307 ATAD2BQ9ULI0 1458 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms