RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 MCOLN1Q9GZU1 580 aa16.95■□□□□ 0.3
VCL-205ENST00000478896 CACNA1FO60840 1977 aa16.95■□□□□ 0.3
VCL-205ENST00000478896 KIF23Q02241 960 aaPredicted RBP16.94■□□□□ 0.3
VCL-205ENST00000478896 FLIIQ13045 1269 aa16.94■□□□□ 0.3
VCL-205ENST00000478896 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
VCL-205ENST00000478896 DGKZQ13574 1117 aa16.94■□□□□ 0.3
VCL-205ENST00000478896 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
VCL-205ENST00000478896 PITPNM2Q9BZ72 1349 aa16.94■□□□□ 0.3
VCL-205ENST00000478896 SLC10A3P09131 477 aa16.93■□□□□ 0.3
VCL-205ENST00000478896 ITGA6P23229 1130 aa16.93■□□□□ 0.3
VCL-205ENST00000478896 OGFOD1Q8N543 542 aa16.93■□□□□ 0.3
VCL-205ENST00000478896 GMLQ99445 158 aa16.93■□□□□ 0.3
VCL-205ENST00000478896 MPHOSPH8Q99549 860 aa16.93■□□□□ 0.3
VCL-205ENST00000478896 SAGE1Q9NXZ1 904 aa16.93■□□□□ 0.3
VCL-205ENST00000478896 ZNF646O15015 1829 aaPredicted RBP16.93■□□□□ 0.3
VCL-205ENST00000478896 IL16Q14005 1332 aa16.93■□□□□ 0.3
VCL-205ENST00000478896 MYO3BQ8WXR4 1341 aa16.93■□□□□ 0.3
VCL-205ENST00000478896 WTIPA6NIX2 430 aaPredicted RBP16.92■□□□□ 0.3
VCL-205ENST00000478896 H7C1W4 665 aa16.92■□□□□ 0.3
VCL-205ENST00000478896 GCKRQ14397 625 aa16.92■□□□□ 0.3
VCL-205ENST00000478896 DNAAF4Q8WXU2 420 aa16.92■□□□□ 0.3
VCL-205ENST00000478896 COA1Q9GZY4 146 aa16.92■□□□□ 0.3
VCL-205ENST00000478896 MRS2Q9HD23 443 aa16.92■□□□□ 0.3
VCL-205ENST00000478896 SCAF8Q9UPN6 1271 aaKnown RBP16.92■□□□□ 0.3
VCL-205ENST00000478896 LEMD3Q9Y2U8 911 aa16.92■□□□□ 0.3
VCL-205ENST00000478896 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
VCL-205ENST00000478896 TRPA1O75762 1119 aa16.91■□□□□ 0.3
VCL-205ENST00000478896 KCNJ4P48050 445 aa16.91■□□□□ 0.3
VCL-205ENST00000478896 FKBP1BP68106 108 aa16.91■□□□□ 0.3
VCL-205ENST00000478896 RASAL3Q86YV0 1011 aa16.91■□□□□ 0.3
VCL-205ENST00000478896 MXD3Q9BW11 206 aa16.91■□□□□ 0.3
VCL-205ENST00000478896 PLA2G12BQ9BX93 195 aa16.91■□□□□ 0.3
VCL-205ENST00000478896 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
VCL-205ENST00000478896 ZNF804BA4D1E1 1349 aa16.91■□□□□ 0.3
VCL-205ENST00000478896 TTLL12Q14166 644 aaPredicted RBP16.9■□□□□ 0.3
VCL-205ENST00000478896 DACT2Q5SW24 774 aa16.9■□□□□ 0.3
VCL-205ENST00000478896 STRIP1Q5VSL9 837 aa16.9■□□□□ 0.3
VCL-205ENST00000478896 ANKRD2Q9GZV1 360 aa16.9■□□□□ 0.3
VCL-205ENST00000478896 RNF186Q9NXI6 227 aa16.9■□□□□ 0.3
VCL-205ENST00000478896 NF2P35240 595 aa16.89■□□□□ 0.29
VCL-205ENST00000478896 MLLT1Q03111 559 aaPredicted RBP16.89■□□□□ 0.29
VCL-205ENST00000478896 NBPF9Q3BBW0 867 aa16.89■□□□□ 0.29
VCL-205ENST00000478896 LINS1Q8NG48 757 aa16.89■□□□□ 0.29
VCL-205ENST00000478896 HDAC9Q9UKV0 1011 aa16.89■□□□□ 0.29
VCL-205ENST00000478896 CHMP3Q9Y3E7 222 aa16.89■□□□□ 0.29
VCL-205ENST00000478896 ANKRD18BA2A2Z9 1011 aa16.88■□□□□ 0.29
VCL-205ENST00000478896 WNT10BO00744 389 aa16.88■□□□□ 0.29
VCL-205ENST00000478896 PRAMEF18Q5VWM3 479 aa16.88■□□□□ 0.29
VCL-205ENST00000478896 TTLL5Q6EMB2 1281 aa16.88■□□□□ 0.29
VCL-205ENST00000478896 TXNRD3Q86VQ6 643 aa16.88■□□□□ 0.29
VCL-205ENST00000478896 REM2Q8IYK8 340 aaPredicted RBP16.88■□□□□ 0.29
VCL-205ENST00000478896 CSRNP1Q96S65 589 aa16.88■□□□□ 0.29
VCL-205ENST00000478896 A0A1B0GUL6 1792 aa16.87■□□□□ 0.29
VCL-205ENST00000478896 ANP32CO43423 234 aa16.87■□□□□ 0.29
VCL-205ENST00000478896 SASH1O94885 1247 aa16.87■□□□□ 0.29
VCL-205ENST00000478896 KLRK1P26718 216 aa16.87■□□□□ 0.29
VCL-205ENST00000478896 CHRNDQ07001 517 aa16.87■□□□□ 0.29
VCL-205ENST00000478896 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
VCL-205ENST00000478896 MOB2Q70IA6 237 aa16.87■□□□□ 0.29
VCL-205ENST00000478896 KIAA0825Q8IV33 1275 aa16.87■□□□□ 0.29
VCL-205ENST00000478896 CSF1RP07333 972 aa16.86■□□□□ 0.29
VCL-205ENST00000478896 CASP7P55210 303 aa16.86■□□□□ 0.29
VCL-205ENST00000478896 GTF2IP78347 998 aa16.86■□□□□ 0.29
VCL-205ENST00000478896 UBE2Q2LH0YL09 131 aa16.85■□□□□ 0.29
VCL-205ENST00000478896 VAMP4O75379 141 aa16.85■□□□□ 0.29
VCL-205ENST00000478896 EXOSC9Q06265 439 aaKnown RBP16.85■□□□□ 0.29
VCL-205ENST00000478896 IFIT5Q13325 482 aaKnown RBP16.85■□□□□ 0.29
VCL-205ENST00000478896 APOBEC3FQ8IUX4 373 aaKnown RBP16.85■□□□□ 0.29
VCL-205ENST00000478896 WDR63Q8IWG1 891 aa16.85■□□□□ 0.29
VCL-205ENST00000478896 F6X3S4 739 aa16.84■□□□□ 0.29
VCL-205ENST00000478896 MMP14P50281 582 aa16.84■□□□□ 0.29
VCL-205ENST00000478896 ECM29Q5VYK3 1845 aa16.84■□□□□ 0.29
VCL-205ENST00000478896 TAF5LO75529 589 aa16.83■□□□□ 0.28
VCL-205ENST00000478896 RGS19P49795 217 aa16.83■□□□□ 0.28
VCL-205ENST00000478896 PRKG1Q13976 671 aa16.83■□□□□ 0.28
VCL-205ENST00000478896 TAF7LQ5H9L4 462 aa16.83■□□□□ 0.28
VCL-205ENST00000478896 CD209Q9NNX6 404 aa16.83■□□□□ 0.28
VCL-205ENST00000478896 MKRN3Q13064 507 aaKnown RBP16.82■□□□□ 0.28
VCL-205ENST00000478896 ARMC9Q7Z3E5 817 aa16.82■□□□□ 0.28
VCL-205ENST00000478896 ZNF804AQ7Z570 1209 aa16.82■□□□□ 0.28
VCL-205ENST00000478896 HELBQ8NG08 1087 aaPredicted RBP16.82■□□□□ 0.28
VCL-205ENST00000478896 COL1A1P02452 1464 aaPredicted RBP16.81■□□□□ 0.28
VCL-205ENST00000478896 SNAP23O00161 211 aa16.81■□□□□ 0.28
VCL-205ENST00000478896 DLGAP5Q15398 846 aa16.81■□□□□ 0.28
VCL-205ENST00000478896 CCDC57Q2TAC2 916 aa16.81■□□□□ 0.28
VCL-205ENST00000478896 BEND3Q5T5X7 828 aa16.81■□□□□ 0.28
VCL-205ENST00000478896 CTU1Q7Z7A3 348 aaKnown RBP16.81■□□□□ 0.28
VCL-205ENST00000478896 F8W031 263 aaPredicted RBP16.8■□□□□ 0.28
VCL-205ENST00000478896 PLIN1O60240 522 aa16.8■□□□□ 0.28
VCL-205ENST00000478896 FOXO4P98177 505 aa16.8■□□□□ 0.28
VCL-205ENST00000478896 LMBR1LQ6UX01 489 aa16.8■□□□□ 0.28
VCL-205ENST00000478896 CNNM1Q9NRU3 951 aa16.8■□□□□ 0.28
VCL-205ENST00000478896 C9orf78Q9NZ63 289 aaPredicted RBP16.8■□□□□ 0.28
VCL-205ENST00000478896 ANGEL1Q9UNK9 670 aaKnown RBP16.8■□□□□ 0.28
VCL-205ENST00000478896 GRM8O00222 908 aa16.79■□□□□ 0.28
VCL-205ENST00000478896 MYO1BO43795 1136 aa16.79■□□□□ 0.28
VCL-205ENST00000478896 TBC1D8O95759 1140 aa16.79■□□□□ 0.28
VCL-205ENST00000478896 SOX10P56693 466 aa16.79■□□□□ 0.28
VCL-205ENST00000478896 SREBF2Q12772 1141 aa16.79■□□□□ 0.28
VCL-205ENST00000478896 SLC4A10Q6U841 1118 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms