RNA–Protein interactions for RNA: ENST00000478672.1

CCZ1-204, Transcript of CCZ1 homolog, vacuolar protein trafficking and biogenesis associated, human

TSL 2

Gene CCZ1, Length 2,062 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCZ1-204	ENST00000478672	CHGB	P05060	677 aa		32.75	■■■□□ 2.83
CCZ1-204	ENST00000478672	KCNJ4	P48050	445 aa		32.75	■■■□□ 2.83
CCZ1-204	ENST00000478672	LSG1	Q9H089	658 aa	Known RBP	32.75	■■■□□ 2.83
CCZ1-204	ENST00000478672	ARAP2	Q8WZ64	1704 aa		32.75	■■■□□ 2.83
CCZ1-204	ENST00000478672	BRIP1	Q9BX63	1249 aa		32.74	■■■□□ 2.83
CCZ1-204	ENST00000478672	RAD50	Q92878	1312 aa		32.74	■■■□□ 2.83
CCZ1-204	ENST00000478672	BECN1	Q14457	450 aa		32.74	■■■□□ 2.83
CCZ1-204	ENST00000478672	KLRG2	A4D1S0	409 aa	Predicted RBP	32.72	■■■□□ 2.83
CCZ1-204	ENST00000478672	EPB41L2	O43491	1005 aa	Known RBP	32.72	■■■□□ 2.83
CCZ1-204	ENST00000478672	HMG20B	Q9P0W2	317 aa		32.71	■■■□□ 2.83
CCZ1-204	ENST00000478672	GYG1	P46976	350 aa		32.7	■■■□□ 2.83
CCZ1-204	ENST00000478672	CCDC125	Q86Z20	511 aa		32.7	■■■□□ 2.83
CCZ1-204	ENST00000478672		A0A1B0GUL6	1792 aa		32.7	■■■□□ 2.83
CCZ1-204	ENST00000478672	CYP2E1	P05181	493 aa	Predicted RBP	32.7	■■■□□ 2.82
CCZ1-204	ENST00000478672	HOXA10	P31260	410 aa	Predicted RBP	32.7	■■■□□ 2.82
CCZ1-204	ENST00000478672	PTH1R	Q03431	593 aa		32.7	■■■□□ 2.82
CCZ1-204	ENST00000478672	TICAM2	Q86XR7	235 aa		32.7	■■■□□ 2.82
CCZ1-204	ENST00000478672	SPATA5	Q8NB90	893 aa		32.7	■■■□□ 2.82
CCZ1-204	ENST00000478672	ANKIB1	Q9P2G1	1089 aa		32.7	■■■□□ 2.82
CCZ1-204	ENST00000478672	RNF113A	O15541	343 aa	Known RBP	32.69	■■■□□ 2.82
CCZ1-204	ENST00000478672	RASGRF1	Q13972	1273 aa		32.69	■■■□□ 2.82
CCZ1-204	ENST00000478672	LRRFIP1	Q32MZ4	808 aa	Known RBP	32.69	■■■□□ 2.82
CCZ1-204	ENST00000478672	SLFNL1	Q499Z3	407 aa		32.69	■■■□□ 2.82
CCZ1-204	ENST00000478672	CAVIN4	Q5BKX8	364 aa		32.69	■■■□□ 2.82
CCZ1-204	ENST00000478672	ZNF589	Q86UQ0	364 aa	Predicted RBP	32.69	■■■□□ 2.82
CCZ1-204	ENST00000478672	SEC62	Q99442	399 aa	Known RBP	32.69	■■■□□ 2.82
CCZ1-204	ENST00000478672	TTF1	Q15361	905 aa	Predicted RBP	32.68	■■■□□ 2.82
CCZ1-204	ENST00000478672	SLC51A	Q86UW1	340 aa		32.68	■■■□□ 2.82
CCZ1-204	ENST00000478672	NRXN2	Q9P2S2	1712 aa		32.68	■■■□□ 2.82
CCZ1-204	ENST00000478672	MCMDC2	Q4G0Z9	681 aa		32.68	■■■□□ 2.82
CCZ1-204	ENST00000478672	VPS37D	Q86XT2	251 aa		32.68	■■■□□ 2.82
CCZ1-204	ENST00000478672	CRAMP1	Q96RY5	1269 aa		32.68	■■■□□ 2.82
CCZ1-204	ENST00000478672	CCDC171	Q6TFL3	1326 aa		32.67	■■■□□ 2.82
CCZ1-204	ENST00000478672	AKAP11	Q9UKA4	1901 aa		32.67	■■■□□ 2.82
CCZ1-204	ENST00000478672	TBC1D2	Q9BYX2	928 aa		32.67	■■■□□ 2.82
CCZ1-204	ENST00000478672	PALD1	Q9ULE6	856 aa		32.67	■■■□□ 2.82
CCZ1-204	ENST00000478672	MED23	Q9ULK4	1368 aa		32.67	■■■□□ 2.82
CCZ1-204	ENST00000478672	ZNF804B	A4D1E1	1349 aa		32.67	■■■□□ 2.82
CCZ1-204	ENST00000478672	BBOX1	O75936	387 aa		32.66	■■■□□ 2.82
CCZ1-204	ENST00000478672	PDE6B	P35913	854 aa		32.66	■■■□□ 2.82
CCZ1-204	ENST00000478672	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.66	■■■□□ 2.82
CCZ1-204	ENST00000478672	GNL3L	Q9NVN8	582 aa	Known RBP	32.66	■■■□□ 2.82
CCZ1-204	ENST00000478672	HSPA4	P34932	840 aa		32.66	■■■□□ 2.82
CCZ1-204	ENST00000478672	RABEP1	Q15276	862 aa		32.66	■■■□□ 2.82
CCZ1-204	ENST00000478672	PIH1D3	Q9NQM4	214 aa	Known RBP	32.66	■■■□□ 2.82
CCZ1-204	ENST00000478672	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	32.66	■■■□□ 2.82
CCZ1-204	ENST00000478672	ZMYM1	Q5SVZ6	1142 aa		32.65	■■■□□ 2.82
CCZ1-204	ENST00000478672	CCDC129	Q6ZRS4	1044 aa		32.65	■■■□□ 2.82
CCZ1-204	ENST00000478672	HELLS	Q9NRZ9	838 aa		32.65	■■■□□ 2.82
CCZ1-204	ENST00000478672	KLRK1	P26718	216 aa		32.65	■■■□□ 2.82
CCZ1-204	ENST00000478672	FAM84B	Q96KN1	310 aa	Predicted RBP	32.65	■■■□□ 2.82
CCZ1-204	ENST00000478672	ANKRD31	Q8N7Z5	1873 aa		32.64	■■■□□ 2.82
CCZ1-204	ENST00000478672	QSER1	Q2KHR3	1735 aa		32.64	■■■□□ 2.82
CCZ1-204	ENST00000478672	ZFY	P08048	801 aa	Predicted RBP	32.64	■■■□□ 2.82
CCZ1-204	ENST00000478672	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	32.64	■■■□□ 2.82
CCZ1-204	ENST00000478672	SRGN	P10124	158 aa		32.63	■■■□□ 2.81
CCZ1-204	ENST00000478672	IDH1	O75874	414 aa	Known RBP	32.63	■■■□□ 2.81
CCZ1-204	ENST00000478672	XDH	P47989	1333 aa		32.63	■■■□□ 2.81
CCZ1-204	ENST00000478672	NPR1	P16066	1061 aa		32.62	■■■□□ 2.81
CCZ1-204	ENST00000478672	ANAPC15	P60006	121 aa		32.62	■■■□□ 2.81
CCZ1-204	ENST00000478672	WASHC4	Q2M389	1173 aa		32.62	■■■□□ 2.81
CCZ1-204	ENST00000478672	HSCB	Q8IWL3	235 aa		32.62	■■■□□ 2.81
CCZ1-204	ENST00000478672	LEMD3	Q9Y2U8	911 aa		32.62	■■■□□ 2.81
CCZ1-204	ENST00000478672	GPSM2	P81274	684 aa		32.61	■■■□□ 2.81
CCZ1-204	ENST00000478672	ZSCAN25	Q6NSZ9	544 aa		32.61	■■■□□ 2.81
CCZ1-204	ENST00000478672	MAP4K1	Q92918	833 aa		32.61	■■■□□ 2.81
CCZ1-204	ENST00000478672	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.61	■■■□□ 2.81
CCZ1-204	ENST00000478672	FBXO33	Q7Z6M2	555 aa		32.6	■■■□□ 2.81
CCZ1-204	ENST00000478672	RBM8A	Q9Y5S9	174 aa	Known RBP	32.6	■■■□□ 2.81
CCZ1-204	ENST00000478672	SNX21	Q969T3	373 aa		32.6	■■■□□ 2.81
CCZ1-204	ENST00000478672	HIBADH	P31937	336 aa	Known RBP	32.59	■■■□□ 2.81
CCZ1-204	ENST00000478672	SLC9C2	Q5TAH2	1124 aa		32.59	■■■□□ 2.81
CCZ1-204	ENST00000478672	PRPF40B	Q6NWY9	871 aa	Known RBP	32.59	■■■□□ 2.81
CCZ1-204	ENST00000478672	PPEF1	O14829	653 aa	Predicted RBP	32.58	■■■□□ 2.81
CCZ1-204	ENST00000478672	FRAT2	O75474	233 aa	Predicted RBP	32.58	■■■□□ 2.81
CCZ1-204	ENST00000478672	OSBP2	Q969R2	916 aa		32.58	■■■□□ 2.81
CCZ1-204	ENST00000478672	MAST3	O60307	1309 aa		32.58	■■■□□ 2.81
CCZ1-204	ENST00000478672		M0R2C6	588 aa		32.57	■■■□□ 2.8
CCZ1-204	ENST00000478672	TXNRD3	Q86VQ6	643 aa		32.57	■■■□□ 2.8
CCZ1-204	ENST00000478672	MASTL	Q96GX5	879 aa		32.57	■■■□□ 2.8
CCZ1-204	ENST00000478672	ALDH1B1	P30837	517 aa		32.57	■■■□□ 2.8
CCZ1-204	ENST00000478672	TMC4	Q7Z404	712 aa		32.57	■■■□□ 2.8
CCZ1-204	ENST00000478672	APPBP2	Q92624	585 aa		32.57	■■■□□ 2.8
CCZ1-204	ENST00000478672	SNX14	Q9Y5W7	946 aa		32.57	■■■□□ 2.8
CCZ1-204	ENST00000478672	ADD2	P35612	726 aa		32.56	■■■□□ 2.8
CCZ1-204	ENST00000478672	C2CD5	Q86YS7	1000 aa		32.56	■■■□□ 2.8
CCZ1-204	ENST00000478672	RASEF	Q8IZ41	740 aa		32.56	■■■□□ 2.8
CCZ1-204	ENST00000478672	DENND2A	Q9ULE3	1009 aa		32.56	■■■□□ 2.8
CCZ1-204	ENST00000478672	CD2BP2	O95400	341 aa	Known RBP	32.55	■■■□□ 2.8
CCZ1-204	ENST00000478672	MAP3K12	Q12852	859 aa		32.55	■■■□□ 2.8
CCZ1-204	ENST00000478672	NECTIN1	Q15223	517 aa		32.55	■■■□□ 2.8
CCZ1-204	ENST00000478672	ERICH6	Q7L0X2	663 aa		32.55	■■■□□ 2.8
CCZ1-204	ENST00000478672	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.55	■■■□□ 2.8
CCZ1-204	ENST00000478672	WWC3	Q9ULE0	1092 aa		32.55	■■■□□ 2.8
CCZ1-204	ENST00000478672	UFL1	O94874	794 aa		32.55	■■■□□ 2.8
CCZ1-204	ENST00000478672	GGA1	Q9UJY5	639 aa		32.55	■■■□□ 2.8
CCZ1-204	ENST00000478672	PDE6A	P16499	860 aa		32.54	■■■□□ 2.8
CCZ1-204	ENST00000478672	ATP2B4	P23634	1241 aa		32.54	■■■□□ 2.8
CCZ1-204	ENST00000478672	SP8	Q8IXZ3	490 aa		32.54	■■■□□ 2.8
CCZ1-204	ENST00000478672	GPR101	Q96P66	508 aa	Predicted RBP	32.54	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms