RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	RASEF	Q8IZ41	740 aa		11.51	□□□□□ -0.57
ATG7-223	ENST00000478638	KBTBD3	Q8NAB2	608 aa		11.51	□□□□□ -0.57
ATG7-223	ENST00000478638	SPRYD3	Q8NCJ5	442 aa		11.51	□□□□□ -0.57
ATG7-223	ENST00000478638	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
ATG7-223	ENST00000478638	BOLA2	Q9H3K6	86 aa		11.51	□□□□□ -0.57
ATG7-223	ENST00000478638	PIM2	Q9P1W9	311 aa		11.51	□□□□□ -0.57
ATG7-223	ENST00000478638	COL24A1	Q17RW2	1714 aa		11.5	□□□□□ -0.57
ATG7-223	ENST00000478638		A0A0D9SFI3	127 aa		11.5	□□□□□ -0.57
ATG7-223	ENST00000478638	LRRC24	Q50LG9	513 aa		11.5	□□□□□ -0.57
ATG7-223	ENST00000478638	TTLL11	Q8NHH1	800 aa		11.5	□□□□□ -0.57
ATG7-223	ENST00000478638	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.5	□□□□□ -0.57
ATG7-223	ENST00000478638	ZSWIM6	Q9HCJ5	1215 aa		11.5	□□□□□ -0.57
ATG7-223	ENST00000478638	RIPOR2	Q9Y4F9	1068 aa		11.5	□□□□□ -0.57
ATG7-223	ENST00000478638	MYH7	P12883	1935 aa		11.5	□□□□□ -0.57
ATG7-223	ENST00000478638	C10orf71	Q711Q0	1435 aa		11.5	□□□□□ -0.57
ATG7-223	ENST00000478638	KLRG2	A4D1S0	409 aa	Predicted RBP	11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	PDE8A	O60658	829 aa		11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	NPR1	P16066	1061 aa		11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	CTSW	P56202	376 aa		11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	GPR162	Q16538	588 aa		11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	DALRD3	Q5D0E6	543 aa	Known RBP	11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	VGLL2	Q8N8G2	317 aa		11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	RPGR	Q92834	1020 aa	Known RBP	11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	MASTL	Q96GX5	879 aa		11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	RBM17	Q96I25	401 aa	Known RBP	11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	FAM227B	Q96M60	508 aa		11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	GBP4	Q96PP9	640 aa		11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	HMG20B	Q9P0W2	317 aa		11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	AKAP2	Q9Y2D5	859 aa		11.49	□□□□□ -0.57
ATG7-223	ENST00000478638	TAF5L	O75529	589 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	HSP90AA1	P07900	732 aa	Known RBP	11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	SRGN	P10124	158 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	ALDH1B1	P30837	517 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	CCDC57	Q2TAC2	916 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	VPS53	Q5VIR6	699 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	CREB3L3	Q68CJ9	461 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	STYK1	Q6J9G0	422 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	TTLL6	Q8N841	843 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	CNKSR1	Q969H4	720 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	FSD1	Q9BTV5	496 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	PUS3	Q9BZE2	481 aa	Known RBP	11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	CEP126	Q9P2H0	1117 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	WWC3	Q9ULE0	1092 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	ZDHHC9	Q9Y397	364 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	RBM8A	Q9Y5S9	174 aa	Known RBP	11.48	□□□□□ -0.57
ATG7-223	ENST00000478638	C4A	P0C0L4	1744 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638		A0A1B0GUL6	1792 aa		11.48	□□□□□ -0.57
ATG7-223	ENST00000478638		A0A1B0GUL7	405 aa		11.47	□□□□□ -0.57
ATG7-223	ENST00000478638	SLC27A2	O14975	620 aa		11.47	□□□□□ -0.57
ATG7-223	ENST00000478638	KCNA3	P22001	575 aa		11.47	□□□□□ -0.57
ATG7-223	ENST00000478638	IFIT5	Q13325	482 aa	Known RBP	11.47	□□□□□ -0.57
ATG7-223	ENST00000478638	ZMYM1	Q5SVZ6	1142 aa		11.47	□□□□□ -0.57
ATG7-223	ENST00000478638	DDX46	Q7L014	1031 aa	Known RBP	11.47	□□□□□ -0.57
ATG7-223	ENST00000478638	ZGPAT	Q8N5A5	531 aa	Known RBP	11.47	□□□□□ -0.57
ATG7-223	ENST00000478638	ZNF594	Q96JF6	807 aa	Predicted RBP	11.47	□□□□□ -0.57
ATG7-223	ENST00000478638	HELLS	Q9NRZ9	838 aa		11.47	□□□□□ -0.57
ATG7-223	ENST00000478638	BCS1L	Q9Y276	419 aa		11.47	□□□□□ -0.57
ATG7-223	ENST00000478638	DOCK2	Q92608	1830 aa		11.46	□□□□□ -0.57
ATG7-223	ENST00000478638	BAG4	O95429	457 aa	Known RBP	11.46	□□□□□ -0.57
ATG7-223	ENST00000478638	BRD1	O95696	1058 aa		11.46	□□□□□ -0.57
ATG7-223	ENST00000478638	SF3B3	Q15393	1217 aa	Known RBP	11.46	□□□□□ -0.57
ATG7-223	ENST00000478638	CRY2	Q49AN0	593 aa		11.46	□□□□□ -0.57
ATG7-223	ENST00000478638	CCDC152	Q4G0S7	254 aa		11.46	□□□□□ -0.57
ATG7-223	ENST00000478638	C3orf67	Q6ZVT6	689 aa		11.46	□□□□□ -0.57
ATG7-223	ENST00000478638	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.46	□□□□□ -0.57
ATG7-223	ENST00000478638	EDC3	Q96F86	508 aa	Known RBP	11.46	□□□□□ -0.57
ATG7-223	ENST00000478638	TMX4	Q9H1E5	349 aa	Predicted RBP	11.46	□□□□□ -0.57
ATG7-223	ENST00000478638	CHMP3	Q9Y3E7	222 aa		11.46	□□□□□ -0.57
ATG7-223	ENST00000478638	LAMA4	Q16363	1823 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	ANKRD18B	A2A2Z9	1011 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	FGFR2	P21802	821 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	HOXA10	P31260	410 aa	Predicted RBP	11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	AK2	P54819	239 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	TIMM10	P62072	90 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	ADCK5	Q3MIX3	580 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	MCMDC2	Q4G0Z9	681 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	RUFY3	Q7L099	469 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	CRAMP1	Q96RY5	1269 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	DSCC1	Q9BVC3	393 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	UPF3B	Q9BZI7	483 aa	Known RBP	11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	GREM2	Q9H772	168 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	PAG1	Q9NWQ8	432 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	LIMCH1	Q9UPQ0	1083 aa		11.45	□□□□□ -0.58
ATG7-223	ENST00000478638	FSD2	A1L4K1	749 aa		11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	ZBTB22	O15209	634 aa		11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	TRAK2	O60296	914 aa		11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	GRIN3B	O60391	1043 aa		11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	BBOX1	O75936	387 aa		11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	ZKSCAN1	P17029	563 aa	Predicted RBP	11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	ITGA6	P23229	1130 aa		11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	PSMA5	P28066	241 aa		11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	RNF20	Q5VTR2	975 aa		11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	PRPF40B	Q6NWY9	871 aa	Known RBP	11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	XAGE2	Q96GT9	111 aa		11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.44	□□□□□ -0.58
ATG7-223	ENST00000478638	ISY1	Q9ULR0	285 aa	Known RBP	11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms