RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 SF3B3Q15393 1217 aaKnown RBP14.48□□□□□ -0.09
PDCD11-204ENST00000478543 PAXIP1Q6ZW49 1069 aaPredicted RBP14.48□□□□□ -0.09
PDCD11-204ENST00000478543 BCL11AQ9H165 835 aa14.48□□□□□ -0.09
PDCD11-204ENST00000478543 DCTPP1Q9H773 170 aa14.48□□□□□ -0.09
PDCD11-204ENST00000478543 EPS15P42566 896 aa14.47□□□□□ -0.09
PDCD11-204ENST00000478543 SMC5Q8IY18 1101 aa14.47□□□□□ -0.09
PDCD11-204ENST00000478543 GPC2Q8N158 579 aa14.47□□□□□ -0.09
PDCD11-204ENST00000478543 GCC1Q96CN9 775 aa14.47□□□□□ -0.09
PDCD11-204ENST00000478543 TLL2Q9Y6L7 1015 aa14.47□□□□□ -0.09
PDCD11-204ENST00000478543 RTL9Q8NET4 1388 aa14.47□□□□□ -0.09
PDCD11-204ENST00000478543 COL4A1P02462 1669 aa14.46□□□□□ -0.09
PDCD11-204ENST00000478543 SPEF2Q9C093 1822 aa14.46□□□□□ -0.09
PDCD11-204ENST00000478543 G3BP1Q13283 466 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDCD11-204ENST00000478543 RPGRQ92834 1020 aaKnown RBP14.46□□□□□ -0.09
PDCD11-204ENST00000478543 COPRSQ9NQ92 184 aa14.46□□□□□ -0.09
PDCD11-204ENST00000478543 SMARCA5O60264 1052 aaPredicted RBP14.45□□□□□ -0.1
PDCD11-204ENST00000478543 NPR1P16066 1061 aa14.45□□□□□ -0.1
PDCD11-204ENST00000478543 LRRC24Q50LG9 513 aa14.45□□□□□ -0.1
PDCD11-204ENST00000478543 ANKRD45Q5TZF3 282 aa14.45□□□□□ -0.1
PDCD11-204ENST00000478543 DDX46Q7L014 1031 aaKnown RBP14.45□□□□□ -0.1
PDCD11-204ENST00000478543 ZIC5Q96T25 663 aa14.45□□□□□ -0.1
PDCD11-204ENST00000478543 CDC5LQ99459 802 aaKnown RBP14.45□□□□□ -0.1
PDCD11-204ENST00000478543 PUS3Q9BZE2 481 aaKnown RBP14.45□□□□□ -0.1
PDCD11-204ENST00000478543 NOP58Q9Y2X3 529 aaKnown RBP14.45□□□□□ -0.1
PDCD11-204ENST00000478543 MKI67P46013 3256 aaKnown RBP14.45□□□□□ -0.1
PDCD11-204ENST00000478543 TAF1P21675 1872 aa14.44□□□□□ -0.1
PDCD11-204ENST00000478543 IGHMBP2P38935 993 aaKnown RBP14.44□□□□□ -0.1
PDCD11-204ENST00000478543 CRY2Q49AN0 593 aa14.44□□□□□ -0.1
PDCD11-204ENST00000478543 HSP90AB4PQ58FF6 505 aa14.44□□□□□ -0.1
PDCD11-204ENST00000478543 SKAP1Q86WV1 359 aa14.44□□□□□ -0.1
PDCD11-204ENST00000478543 ANKRD18AQ8IVF6 992 aa14.44□□□□□ -0.1
PDCD11-204ENST00000478543 CELF1Q92879 486 aaKnown RBP14.44□□□□□ -0.1
PDCD11-204ENST00000478543 RBM17Q96I25 401 aaKnown RBP14.44□□□□□ -0.1
PDCD11-204ENST00000478543 BEGAINQ9BUH8 593 aa14.44□□□□□ -0.1
PDCD11-204ENST00000478543 CNNM1Q9NRU3 951 aa14.44□□□□□ -0.1
PDCD11-204ENST00000478543 GJA3Q9Y6H8 435 aa14.44□□□□□ -0.1
PDCD11-204ENST00000478543 PDE4DIPQ5VU43 2346 aa14.43□□□□□ -0.1
PDCD11-204ENST00000478543 EYA2O00167 538 aa14.43□□□□□ -0.1
PDCD11-204ENST00000478543 RAB11FIP3O75154 756 aa14.43□□□□□ -0.1
PDCD11-204ENST00000478543 ECE1P42892 770 aa14.43□□□□□ -0.1
PDCD11-204ENST00000478543 DGKZQ13574 1117 aa14.43□□□□□ -0.1
PDCD11-204ENST00000478543 LDHAL6AQ6ZMR3 332 aa14.43□□□□□ -0.1
PDCD11-204ENST00000478543 SAPCD2Q86UD0 394 aa14.43□□□□□ -0.1
PDCD11-204ENST00000478543 RHPN1Q8TCX5 695 aa14.43□□□□□ -0.1
PDCD11-204ENST00000478543 MPHOSPH8Q99549 860 aa14.43□□□□□ -0.1
PDCD11-204ENST00000478543 ZBTB47Q9UFB7 747 aaPredicted RBP14.43□□□□□ -0.1
PDCD11-204ENST00000478543 SASH1O94885 1247 aa14.42□□□□□ -0.1
PDCD11-204ENST00000478543 MAP2K2P36507 400 aa14.42□□□□□ -0.1
PDCD11-204ENST00000478543 NUCB1Q02818 461 aa14.42□□□□□ -0.1
PDCD11-204ENST00000478543 GRAPQ13588 217 aa14.42□□□□□ -0.1
PDCD11-204ENST00000478543 ATG9AQ7Z3C6 839 aa14.42□□□□□ -0.1
PDCD11-204ENST00000478543 ERC1Q8IUD2 1116 aa14.42□□□□□ -0.1
PDCD11-204ENST00000478543 RTKN2Q8IZC4 609 aa14.42□□□□□ -0.1
PDCD11-204ENST00000478543 GRAPLQ8TC17 118 aaPredicted RBP14.42□□□□□ -0.1
PDCD11-204ENST00000478543 LRRCC1Q9C099 1032 aa14.42□□□□□ -0.1
PDCD11-204ENST00000478543 LNPKQ9C0E8 428 aa14.42□□□□□ -0.1
PDCD11-204ENST00000478543 IL1RAPL2Q9NP60 686 aa14.42□□□□□ -0.1
PDCD11-204ENST00000478543 CIAO1O76071 339 aa14.41□□□□□ -0.1
PDCD11-204ENST00000478543 IL15P40933 162 aaPredicted RBP14.41□□□□□ -0.1
PDCD11-204ENST00000478543 RPS8P62241 208 aaKnown RBP14.41□□□□□ -0.1
PDCD11-204ENST00000478543 TFCP2Q12800 502 aa14.41□□□□□ -0.1
PDCD11-204ENST00000478543 CHD1LQ86WJ1 897 aa14.41□□□□□ -0.1
PDCD11-204ENST00000478543 KIF1BPQ96EK5 621 aa14.41□□□□□ -0.1
PDCD11-204ENST00000478543 HOXA10P31260 410 aaPredicted RBP14.4□□□□□ -0.1
PDCD11-204ENST00000478543 SOX10P56693 466 aa14.4□□□□□ -0.1
PDCD11-204ENST00000478543 METTL24Q5JXM2 366 aa14.4□□□□□ -0.1
PDCD11-204ENST00000478543 CIAPIN1Q6FI81 312 aa14.4□□□□□ -0.1
PDCD11-204ENST00000478543 PSMD1Q99460 953 aa14.4□□□□□ -0.1
PDCD11-204ENST00000478543 RIPOR2Q9Y4F9 1068 aa14.4□□□□□ -0.1
PDCD11-204ENST00000478543 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.4□□□□□ -0.1
PDCD11-204ENST00000478543 DLK2Q6UY11 383 aa14.39□□□□□ -0.11
PDCD11-204ENST00000478543 HELBQ8NG08 1087 aaPredicted RBP14.39□□□□□ -0.11
PDCD11-204ENST00000478543 CRAMP1Q96RY5 1269 aa14.39□□□□□ -0.11
PDCD11-204ENST00000478543 CEP126Q9P2H0 1117 aa14.39□□□□□ -0.11
PDCD11-204ENST00000478543 FBXO3Q9UK99 471 aa14.39□□□□□ -0.11
PDCD11-204ENST00000478543 BRCA2P51587 3418 aa14.38□□□□□ -0.11
PDCD11-204ENST00000478543 PPEF1O14829 653 aaPredicted RBP14.38□□□□□ -0.11
PDCD11-204ENST00000478543 CELF2O95319 508 aaKnown RBP14.38□□□□□ -0.11
PDCD11-204ENST00000478543 PDE4AP27815 886 aa14.38□□□□□ -0.11
PDCD11-204ENST00000478543 RGS3P49796 1198 aa14.38□□□□□ -0.11
PDCD11-204ENST00000478543 USP50Q70EL3 339 aaPredicted RBP14.38□□□□□ -0.11
PDCD11-204ENST00000478543 GLIS2Q9BZE0 524 aaPredicted RBP14.38□□□□□ -0.11
PDCD11-204ENST00000478543 BSDC1Q9NW68 430 aaPredicted RBP14.38□□□□□ -0.11
PDCD11-204ENST00000478543 MROH5Q6ZUA9 1318 aa14.38□□□□□ -0.11
PDCD11-204ENST00000478543 LMOD1P29536 600 aaPredicted RBP14.37□□□□□ -0.11
PDCD11-204ENST00000478543 EIF6P56537 245 aaKnown RBP14.37□□□□□ -0.11
PDCD11-204ENST00000478543 CHRNDQ07001 517 aa14.37□□□□□ -0.11
PDCD11-204ENST00000478543 AACSQ86V21 672 aa14.37□□□□□ -0.11
PDCD11-204ENST00000478543 CLASRPQ8N2M8 674 aaKnown RBP14.37□□□□□ -0.11
PDCD11-204ENST00000478543 OTUD7AQ8TE49 926 aaPredicted RBP14.37□□□□□ -0.11
PDCD11-204ENST00000478543 JDP2Q8WYK2 163 aa14.37□□□□□ -0.11
PDCD11-204ENST00000478543 ZNF609O15014 1411 aa14.36□□□□□ -0.11
PDCD11-204ENST00000478543 CA12O43570 354 aa14.36□□□□□ -0.11
PDCD11-204ENST00000478543 TAF5LO75529 589 aa14.36□□□□□ -0.11
PDCD11-204ENST00000478543 BBOX1O75936 387 aa14.36□□□□□ -0.11
PDCD11-204ENST00000478543 ALDH1B1P30837 517 aa14.36□□□□□ -0.11
PDCD11-204ENST00000478543 TNNI3KQ59H18 835 aa14.36□□□□□ -0.11
PDCD11-204ENST00000478543 CCDC8Q9H0W5 538 aaPredicted RBP14.36□□□□□ -0.11
PDCD11-204ENST00000478543 MINPP1Q9UNW1 487 aa14.36□□□□□ -0.11
PDCD11-204ENST00000478543 FPGT-TNNI3KV9GXZ4 949 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms