RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CCT4P50991 539 aaKnown RBP18.37■□□□□ 0.53
SMARCE1-209ENST00000478349 ZNF280AP59817 542 aaPredicted RBP18.37■□□□□ 0.53
SMARCE1-209ENST00000478349 EXOSC9Q06265 439 aaKnown RBP18.37■□□□□ 0.53
SMARCE1-209ENST00000478349 COA1Q9GZY4 146 aa18.37■□□□□ 0.53
SMARCE1-209ENST00000478349 GBA2Q9HCG7 927 aaPredicted RBP18.37■□□□□ 0.53
SMARCE1-209ENST00000478349 KCNQ5Q9NR82 932 aa18.37■□□□□ 0.53
SMARCE1-209ENST00000478349 PITPNM2Q9BZ72 1349 aa18.35■□□□□ 0.53
SMARCE1-209ENST00000478349 ANKRD18BA2A2Z9 1011 aa18.35■□□□□ 0.53
SMARCE1-209ENST00000478349 FAM161AQ3B820 660 aa18.35■□□□□ 0.53
SMARCE1-209ENST00000478349 FAM9BQ8IZU0 186 aa18.35■□□□□ 0.53
SMARCE1-209ENST00000478349 CCDC102AQ96A19 550 aa18.35■□□□□ 0.53
SMARCE1-209ENST00000478349 MYOZ2Q9NPC6 264 aa18.35■□□□□ 0.53
SMARCE1-209ENST00000478349 IFIT5Q13325 482 aaKnown RBP18.34■□□□□ 0.53
SMARCE1-209ENST00000478349 STRIP1Q5VSL9 837 aa18.34■□□□□ 0.53
SMARCE1-209ENST00000478349 ZNF804BA4D1E1 1349 aa18.33■□□□□ 0.53
SMARCE1-209ENST00000478349 ADM5C9JUS6 153 aa18.33■□□□□ 0.52
SMARCE1-209ENST00000478349 AOC2O75106 756 aa18.33■□□□□ 0.52
SMARCE1-209ENST00000478349 EGFRP00533 1210 aa18.33■□□□□ 0.52
SMARCE1-209ENST00000478349 CSF1RP07333 972 aa18.33■□□□□ 0.52
SMARCE1-209ENST00000478349 FKBP1BP68106 108 aa18.33■□□□□ 0.52
SMARCE1-209ENST00000478349 RGMBQ6NW40 437 aa18.33■□□□□ 0.52
SMARCE1-209ENST00000478349 FBXW7Q969H0 707 aa18.33■□□□□ 0.52
SMARCE1-209ENST00000478349 HOXD11P31277 338 aaPredicted RBP18.32■□□□□ 0.52
SMARCE1-209ENST00000478349 SCARF1Q14162 830 aa18.32■□□□□ 0.52
SMARCE1-209ENST00000478349 ANGEL2Q5VTE6 544 aaKnown RBP18.32■□□□□ 0.52
SMARCE1-209ENST00000478349 GMLQ99445 158 aa18.32■□□□□ 0.52
SMARCE1-209ENST00000478349 HDAC9Q9UKV0 1011 aa18.32■□□□□ 0.52
SMARCE1-209ENST00000478349 CHMP3Q9Y3E7 222 aa18.32■□□□□ 0.52
SMARCE1-209ENST00000478349 CASP7P55210 303 aa18.31■□□□□ 0.52
SMARCE1-209ENST00000478349 TAF7LQ5H9L4 462 aa18.31■□□□□ 0.52
SMARCE1-209ENST00000478349 CDCA5Q96FF9 252 aa18.31■□□□□ 0.52
SMARCE1-209ENST00000478349 ALDH1L1O75891 902 aa18.3■□□□□ 0.52
SMARCE1-209ENST00000478349 NF2P35240 595 aa18.3■□□□□ 0.52
SMARCE1-209ENST00000478349 ZNF157P51786 506 aaPredicted RBP18.3■□□□□ 0.52
SMARCE1-209ENST00000478349 CCDC57Q2TAC2 916 aa18.3■□□□□ 0.52
SMARCE1-209ENST00000478349 DACT2Q5SW24 774 aa18.3■□□□□ 0.52
SMARCE1-209ENST00000478349 BEND3Q5T5X7 828 aa18.3■□□□□ 0.52
SMARCE1-209ENST00000478349 REM2Q8IYK8 340 aaPredicted RBP18.3■□□□□ 0.52
SMARCE1-209ENST00000478349 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
SMARCE1-209ENST00000478349 MYH3P11055 1940 aa18.29■□□□□ 0.52
SMARCE1-209ENST00000478349 GRM8O00222 908 aa18.29■□□□□ 0.52
SMARCE1-209ENST00000478349 CHRNDQ07001 517 aa18.29■□□□□ 0.52
SMARCE1-209ENST00000478349 F6X3S4 739 aa18.28■□□□□ 0.52
SMARCE1-209ENST00000478349 TTLL5Q6EMB2 1281 aa18.28■□□□□ 0.52
SMARCE1-209ENST00000478349 ZNF804AQ7Z570 1209 aa18.28■□□□□ 0.52
SMARCE1-209ENST00000478349 SRCIN1Q9C0H9 1055 aa18.28■□□□□ 0.52
SMARCE1-209ENST00000478349 SAGE1Q9NXZ1 904 aa18.28■□□□□ 0.52
SMARCE1-209ENST00000478349 CACNA1FO60840 1977 aa18.26■□□□□ 0.51
SMARCE1-209ENST00000478349 SCN9AQ15858 1988 aa18.26■□□□□ 0.51
SMARCE1-209ENST00000478349 SLC4A10Q6U841 1118 aa18.26■□□□□ 0.51
SMARCE1-209ENST00000478349 LMBR1LQ6UX01 489 aa18.26■□□□□ 0.51
SMARCE1-209ENST00000478349 C15orf52Q6ZUT6 534 aaKnown RBP18.26■□□□□ 0.51
SMARCE1-209ENST00000478349 APOBEC3FQ8IUX4 373 aaKnown RBP18.26■□□□□ 0.51
SMARCE1-209ENST00000478349 ASTN2O75129 1339 aaPredicted RBP18.25■□□□□ 0.51
SMARCE1-209ENST00000478349 SLC10A3P09131 477 aa18.25■□□□□ 0.51
SMARCE1-209ENST00000478349 FOXO4P98177 505 aa18.25■□□□□ 0.51
SMARCE1-209ENST00000478349 LDHAL6AQ6ZMR3 332 aa18.25■□□□□ 0.51
SMARCE1-209ENST00000478349 ABHD8Q96I13 439 aa18.25■□□□□ 0.51
SMARCE1-209ENST00000478349 SPINK5Q9NQ38 1064 aaPredicted RBP18.25■□□□□ 0.51
SMARCE1-209ENST00000478349 CNNM1Q9NRU3 951 aa18.25■□□□□ 0.51
SMARCE1-209ENST00000478349 PSME4Q14997 1843 aa18.24■□□□□ 0.51
SMARCE1-209ENST00000478349 E9PSI1 815 aa18.24■□□□□ 0.51
SMARCE1-209ENST00000478349 GTF2IP78347 998 aa18.24■□□□□ 0.51
SMARCE1-209ENST00000478349 DLK2Q6UY11 383 aa18.24■□□□□ 0.51
SMARCE1-209ENST00000478349 CD209Q9NNX6 404 aa18.24■□□□□ 0.51
SMARCE1-209ENST00000478349 TSKSQ9UJT2 592 aa18.24■□□□□ 0.51
SMARCE1-209ENST00000478349 PAPPA2Q9BXP8 1791 aa18.23■□□□□ 0.51
SMARCE1-209ENST00000478349 COL1A1P02452 1464 aaPredicted RBP18.23■□□□□ 0.51
SMARCE1-209ENST00000478349 FAM155AB1AL88 458 aaPredicted RBP18.23■□□□□ 0.51
SMARCE1-209ENST00000478349 WNT10BO00744 389 aa18.23■□□□□ 0.51
SMARCE1-209ENST00000478349 MYO1BO43795 1136 aa18.23■□□□□ 0.51
SMARCE1-209ENST00000478349 TTLL12Q14166 644 aaPredicted RBP18.23■□□□□ 0.51
SMARCE1-209ENST00000478349 TXNRD3Q86VQ6 643 aa18.23■□□□□ 0.51
SMARCE1-209ENST00000478349 KIAA0825Q8IV33 1275 aa18.23■□□□□ 0.51
SMARCE1-209ENST00000478349 PTPRCP08575 1304 aa18.23■□□□□ 0.51
SMARCE1-209ENST00000478349 WTIPA6NIX2 430 aaPredicted RBP18.22■□□□□ 0.51
SMARCE1-209ENST00000478349 KLRK1P26718 216 aa18.22■□□□□ 0.51
SMARCE1-209ENST00000478349 FKBP1AP62942 108 aaKnown RBP18.22■□□□□ 0.51
SMARCE1-209ENST00000478349 KIF23Q02241 960 aaPredicted RBP18.22■□□□□ 0.51
SMARCE1-209ENST00000478349 DLGAP5Q15398 846 aa18.22■□□□□ 0.51
SMARCE1-209ENST00000478349 NBPF9Q3BBW0 867 aa18.22■□□□□ 0.51
SMARCE1-209ENST00000478349 ZNF521Q96K83 1311 aa18.22■□□□□ 0.51
SMARCE1-209ENST00000478349 SPEF2Q9C093 1822 aa18.21■□□□□ 0.51
SMARCE1-209ENST00000478349 TAF5LO75529 589 aa18.21■□□□□ 0.51
SMARCE1-209ENST00000478349 MXD3Q9BW11 206 aa18.21■□□□□ 0.51
SMARCE1-209ENST00000478349 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
SMARCE1-209ENST00000478349 SASH1O94885 1247 aa18.2■□□□□ 0.5
SMARCE1-209ENST00000478349 IL1R1P14778 569 aa18.2■□□□□ 0.5
SMARCE1-209ENST00000478349 ARMC9Q7Z3E5 817 aa18.2■□□□□ 0.5
SMARCE1-209ENST00000478349 RASAL3Q86YV0 1011 aa18.2■□□□□ 0.5
SMARCE1-209ENST00000478349 HELBQ8NG08 1087 aaPredicted RBP18.2■□□□□ 0.5
SMARCE1-209ENST00000478349 PPP2R3BQ9Y5P8 575 aa18.2■□□□□ 0.5
SMARCE1-209ENST00000478349 UBE4AQ14139 1066 aa18.19■□□□□ 0.5
SMARCE1-209ENST00000478349 MROH5Q6ZUA9 1318 aa18.19■□□□□ 0.5
SMARCE1-209ENST00000478349 PLIN1O60240 522 aa18.18■□□□□ 0.5
SMARCE1-209ENST00000478349 MTMR14Q8NCE2 650 aa18.18■□□□□ 0.5
SMARCE1-209ENST00000478349 ZIC5Q96T25 663 aa18.18■□□□□ 0.5
SMARCE1-209ENST00000478349 DGKZQ13574 1117 aa18.17■□□□□ 0.5
SMARCE1-209ENST00000478349 EPHA10Q5JZY3 1008 aa18.17■□□□□ 0.5
SMARCE1-209ENST00000478349 RNF186Q9NXI6 227 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms