RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 CNTROBQ8N137 903 aa28.52■■■□□ 2.16
TRAF4-211ENST00000478021 DPF2Q92785 391 aa28.52■■■□□ 2.16
TRAF4-211ENST00000478021 FBXW7Q969H0 707 aa28.52■■■□□ 2.16
TRAF4-211ENST00000478021 COA1Q9GZY4 146 aa28.52■■■□□ 2.16
TRAF4-211ENST00000478021 H7C1D1 291 aa28.51■■■□□ 2.15
TRAF4-211ENST00000478021 ITGBL1O95965 494 aaPredicted RBP28.51■■■□□ 2.15
TRAF4-211ENST00000478021 RPS12P25398 132 aaKnown RBP28.51■■■□□ 2.15
TRAF4-211ENST00000478021 LRRC24Q50LG9 513 aa28.51■■■□□ 2.15
TRAF4-211ENST00000478021 PASKQ96RG2 1323 aa28.5■■■□□ 2.15
TRAF4-211ENST00000478021 IRS2Q9Y4H2 1338 aa28.5■■■□□ 2.15
TRAF4-211ENST00000478021 USP17L3A6NCW0 530 aa28.5■■■□□ 2.15
TRAF4-211ENST00000478021 USP17L4A6NCW7 530 aa28.5■■■□□ 2.15
TRAF4-211ENST00000478021 HIRAP54198 1017 aaPredicted RBP28.5■■■□□ 2.15
TRAF4-211ENST00000478021 ZKSCAN2Q63HK3 967 aa28.5■■■□□ 2.15
TRAF4-211ENST00000478021 RSBN1LQ6PCB5 846 aaPredicted RBP28.5■■■□□ 2.15
TRAF4-211ENST00000478021 USP17L1Q7RTZ2 530 aa28.5■■■□□ 2.15
TRAF4-211ENST00000478021 SAMD7Q7Z3H4 446 aa28.5■■■□□ 2.15
TRAF4-211ENST00000478021 LRRFIP2Q9Y608 721 aaKnown RBP28.5■■■□□ 2.15
TRAF4-211ENST00000478021 TBC1D10BQ4KMP7 808 aaPredicted RBP28.49■■■□□ 2.15
TRAF4-211ENST00000478021 RIPOR2Q9Y4F9 1068 aa28.49■■■□□ 2.15
TRAF4-211ENST00000478021 MXD3Q9BW11 206 aa28.48■■■□□ 2.15
TRAF4-211ENST00000478021 EGFRP00533 1210 aa28.47■■■□□ 2.15
TRAF4-211ENST00000478021 RFX5P48382 616 aaPredicted RBP28.47■■■□□ 2.15
TRAF4-211ENST00000478021 RBM26Q5T8P6 1007 aaKnown RBP28.47■■■□□ 2.15
TRAF4-211ENST00000478021 C15orf52Q6ZUT6 534 aaKnown RBP28.46■■■□□ 2.15
TRAF4-211ENST00000478021 CD209Q9NNX6 404 aa28.46■■■□□ 2.15
TRAF4-211ENST00000478021 MROH5Q6ZUA9 1318 aa28.45■■■□□ 2.15
TRAF4-211ENST00000478021 FMR1Q06787 632 aaKnown RBP eCLIP28.45■■■□□ 2.14
TRAF4-211ENST00000478021 METTL24Q5JXM2 366 aa28.45■■■□□ 2.14
TRAF4-211ENST00000478021 TMEM57Q8N5G2 664 aa28.45■■■□□ 2.14
TRAF4-211ENST00000478021 DNAJC5GQ8N7S2 189 aa28.45■■■□□ 2.14
TRAF4-211ENST00000478021 AGBL3Q8NEM8 1001 aa28.45■■■□□ 2.14
TRAF4-211ENST00000478021 ZNF609O15014 1411 aa28.44■■■□□ 2.14
TRAF4-211ENST00000478021 DACT2Q5SW24 774 aa28.44■■■□□ 2.14
TRAF4-211ENST00000478021 ZNF804AQ7Z570 1209 aa28.44■■■□□ 2.14
TRAF4-211ENST00000478021 GNAI3P08754 354 aa28.43■■■□□ 2.14
TRAF4-211ENST00000478021 GTF2IP78347 998 aa28.43■■■□□ 2.14
TRAF4-211ENST00000478021 PTPN12Q05209 780 aaKnown RBP28.43■■■□□ 2.14
TRAF4-211ENST00000478021 STRIP1Q5VSL9 837 aa28.43■■■□□ 2.14
TRAF4-211ENST00000478021 GMLQ99445 158 aa28.43■■■□□ 2.14
TRAF4-211ENST00000478021 HDAC5Q9UQL6 1122 aa28.43■■■□□ 2.14
TRAF4-211ENST00000478021 TRAF5O00463 557 aa28.42■■■□□ 2.14
TRAF4-211ENST00000478021 UBE4AQ14139 1066 aa28.42■■■□□ 2.14
TRAF4-211ENST00000478021 KIF4BQ2VIQ3 1234 aa28.42■■■□□ 2.14
TRAF4-211ENST00000478021 TTLL5Q6EMB2 1281 aa28.42■■■□□ 2.14
TRAF4-211ENST00000478021 GLIS2Q9BZE0 524 aaPredicted RBP28.41■■■□□ 2.14
TRAF4-211ENST00000478021 SIL1Q9H173 461 aa28.41■■■□□ 2.14
TRAF4-211ENST00000478021 CREBZFQ9NS37 354 aa28.41■■■□□ 2.14
TRAF4-211ENST00000478021 TRPM7Q96QT4 1865 aa28.4■■■□□ 2.14
TRAF4-211ENST00000478021 EYA2O00167 538 aa28.4■■■□□ 2.14
TRAF4-211ENST00000478021 USP17L8P0C7I0 530 aa28.4■■■□□ 2.14
TRAF4-211ENST00000478021 GYG1P46976 350 aa28.4■■■□□ 2.14
TRAF4-211ENST00000478021 FTSJ3Q8IY81 847 aaKnown RBP28.4■■■□□ 2.14
TRAF4-211ENST00000478021 VGLL2Q8N8G2 317 aa28.4■■■□□ 2.14
TRAF4-211ENST00000478021 PGAP2Q9UHJ9 254 aa28.4■■■□□ 2.14
TRAF4-211ENST00000478021 POLR2AP24928 1970 aaKnown RBP28.39■■■□□ 2.14
TRAF4-211ENST00000478021 ZNF280AP59817 542 aaPredicted RBP28.39■■■□□ 2.14
TRAF4-211ENST00000478021 ZC3H15Q8WU90 426 aaKnown RBP28.39■■■□□ 2.14
TRAF4-211ENST00000478021 KLRG1Q96E93 195 aa28.39■■■□□ 2.14
TRAF4-211ENST00000478021 PA2G4Q9UQ80 394 aaKnown RBP28.39■■■□□ 2.14
TRAF4-211ENST00000478021 TMEM88BA6NKF7 163 aa28.38■■■□□ 2.13
TRAF4-211ENST00000478021 PDE8BO95263 885 aa28.38■■■□□ 2.13
TRAF4-211ENST00000478021 IL1R1P14778 569 aa28.38■■■□□ 2.13
TRAF4-211ENST00000478021 DZIP1LQ8IYY4 767 aaKnown RBP28.38■■■□□ 2.13
TRAF4-211ENST00000478021 JAG2Q9Y219 1238 aa28.38■■■□□ 2.13
TRAF4-211ENST00000478021 MYO3BQ8WXR4 1341 aa28.38■■■□□ 2.13
TRAF4-211ENST00000478021 RLBP1P12271 317 aa28.37■■■□□ 2.13
TRAF4-211ENST00000478021 ATG9AQ7Z3C6 839 aa28.37■■■□□ 2.13
TRAF4-211ENST00000478021 MYOZ2Q9NPC6 264 aa28.37■■■□□ 2.13
TRAF4-211ENST00000478021 ASTN2O75129 1339 aaPredicted RBP28.37■■■□□ 2.13
TRAF4-211ENST00000478021 FAM84BQ96KN1 310 aaPredicted RBP28.36■■■□□ 2.13
TRAF4-211ENST00000478021 GNAI2P04899 355 aa28.35■■■□□ 2.13
TRAF4-211ENST00000478021 HIBADHP31937 336 aaKnown RBP28.35■■■□□ 2.13
TRAF4-211ENST00000478021 KIAA0825Q8IV33 1275 aa28.35■■■□□ 2.13
TRAF4-211ENST00000478021 ITPRIPQ8IWB1 547 aa28.35■■■□□ 2.13
TRAF4-211ENST00000478021 MKRN1Q9UHC7 482 aaKnown RBP28.35■■■□□ 2.13
TRAF4-211ENST00000478021 SRGAP3O43295 1099 aa28.34■■■□□ 2.13
TRAF4-211ENST00000478021 DLK2Q6UY11 383 aa28.34■■■□□ 2.13
TRAF4-211ENST00000478021 CDC37L1Q7L3B6 337 aa28.34■■■□□ 2.13
TRAF4-211ENST00000478021 USP48Q86UV5 1035 aa28.34■■■□□ 2.13
TRAF4-211ENST00000478021 GGA3Q9NZ52 723 aa28.34■■■□□ 2.13
TRAF4-211ENST00000478021 PUM3Q15397 648 aaKnown RBP28.33■■■□□ 2.13
TRAF4-211ENST00000478021 OGFOD1Q8N543 542 aa28.33■■■□□ 2.13
TRAF4-211ENST00000478021 CERS5Q8N5B7 392 aa28.33■■■□□ 2.13
TRAF4-211ENST00000478021 DCPSQ96C86 337 aaKnown RBP28.33■■■□□ 2.13
TRAF4-211ENST00000478021 IQSEC3Q9UPP2 1182 aaPredicted RBP28.33■■■□□ 2.13
TRAF4-211ENST00000478021 CIAO1O76071 339 aa28.32■■■□□ 2.12
TRAF4-211ENST00000478021 SCARF1Q14162 830 aa28.32■■■□□ 2.12
TRAF4-211ENST00000478021 TDRD7Q8NHU6 1098 aaKnown RBP28.32■■■□□ 2.12
TRAF4-211ENST00000478021 ZNF408Q9H9D4 720 aa28.32■■■□□ 2.12
TRAF4-211ENST00000478021 ADM5C9JUS6 153 aa28.31■■■□□ 2.12
TRAF4-211ENST00000478021 FGFR2P21802 821 aa28.31■■■□□ 2.12
TRAF4-211ENST00000478021 MTX1Q13505 466 aa28.31■■■□□ 2.12
TRAF4-211ENST00000478021 CST9Q5W186 159 aa28.31■■■□□ 2.12
TRAF4-211ENST00000478021 KRT26Q7Z3Y9 468 aa28.31■■■□□ 2.12
TRAF4-211ENST00000478021 VPS37DQ86XT2 251 aa28.31■■■□□ 2.12
TRAF4-211ENST00000478021 PANK1Q8TE04 598 aa28.31■■■□□ 2.12
TRAF4-211ENST00000478021 COPRSQ9NQ92 184 aa28.31■■■□□ 2.12
TRAF4-211ENST00000478021 FBXO3Q9UK99 471 aa28.31■■■□□ 2.12
TRAF4-211ENST00000478021 ABT1Q9ULW3 272 aaKnown RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms