RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 USP17L8P0C7I0 530 aa14.52□□□□□ -0.09
HDLBP-236ENST00000477477 ITGA6P23229 1130 aa14.52□□□□□ -0.09
HDLBP-236ENST00000477477 SCARF1Q14162 830 aa14.52□□□□□ -0.09
HDLBP-236ENST00000477477 FAM161AQ3B820 660 aa14.52□□□□□ -0.09
HDLBP-236ENST00000477477 ANGEL2Q5VTE6 544 aaKnown RBP14.52□□□□□ -0.09
HDLBP-236ENST00000477477 LINS1Q8NG48 757 aa14.52□□□□□ -0.09
HDLBP-236ENST00000477477 CDCA5Q96FF9 252 aa14.52□□□□□ -0.09
HDLBP-236ENST00000477477 MYH16Q9H6N6 1097 aa14.52□□□□□ -0.09
HDLBP-236ENST00000477477 LEMD3Q9Y2U8 911 aa14.52□□□□□ -0.09
HDLBP-236ENST00000477477 PSME4Q14997 1843 aa14.52□□□□□ -0.09
HDLBP-236ENST00000477477 MYH3P11055 1940 aa14.51□□□□□ -0.09
HDLBP-236ENST00000477477 PITPNM2Q9BZ72 1349 aa14.51□□□□□ -0.09
HDLBP-236ENST00000477477 CSF1RP07333 972 aa14.51□□□□□ -0.09
HDLBP-236ENST00000477477 ZEB1P37275 1124 aaPredicted RBP14.51□□□□□ -0.09
HDLBP-236ENST00000477477 CCDC102AQ96A19 550 aa14.51□□□□□ -0.09
HDLBP-236ENST00000477477 COA1Q9GZY4 146 aa14.51□□□□□ -0.09
HDLBP-236ENST00000477477 SALL2Q9Y467 1007 aaPredicted RBP14.51□□□□□ -0.09
HDLBP-236ENST00000477477 ZNF157P51786 506 aaPredicted RBP14.5□□□□□ -0.09
HDLBP-236ENST00000477477 EXOSC9Q06265 439 aaKnown RBP14.5□□□□□ -0.09
HDLBP-236ENST00000477477 DACT2Q5SW24 774 aa14.5□□□□□ -0.09
HDLBP-236ENST00000477477 TXNRD3Q86VQ6 643 aa14.5□□□□□ -0.09
HDLBP-236ENST00000477477 ANKRD2Q9GZV1 360 aa14.5□□□□□ -0.09
HDLBP-236ENST00000477477 ZNF804BA4D1E1 1349 aa14.49□□□□□ -0.09
HDLBP-236ENST00000477477 MYO3BQ8WXR4 1341 aa14.49□□□□□ -0.09
HDLBP-236ENST00000477477 ZNF316A6NFI3 1004 aaPredicted RBP14.49□□□□□ -0.09
HDLBP-236ENST00000477477 SLC10A3P09131 477 aa14.49□□□□□ -0.09
HDLBP-236ENST00000477477 STRIP1Q5VSL9 837 aa14.49□□□□□ -0.09
HDLBP-236ENST00000477477 MPHOSPH8Q99549 860 aa14.49□□□□□ -0.09
HDLBP-236ENST00000477477 MXD3Q9BW11 206 aa14.49□□□□□ -0.09
HDLBP-236ENST00000477477 SPEF2Q9C093 1822 aa14.49□□□□□ -0.09
HDLBP-236ENST00000477477 KLRK1P26718 216 aa14.48□□□□□ -0.09
HDLBP-236ENST00000477477 FKBP1BP68106 108 aa14.48□□□□□ -0.09
HDLBP-236ENST00000477477 KIF23Q02241 960 aaPredicted RBP14.48□□□□□ -0.09
HDLBP-236ENST00000477477 FBXW7Q969H0 707 aa14.48□□□□□ -0.09
HDLBP-236ENST00000477477 SPINK5Q9NQ38 1064 aaPredicted RBP14.48□□□□□ -0.09
HDLBP-236ENST00000477477 POLR2AP24928 1970 aaKnown RBP14.47□□□□□ -0.09
HDLBP-236ENST00000477477 ANKRD18BA2A2Z9 1011 aa14.47□□□□□ -0.09
HDLBP-236ENST00000477477 F6X3S4 739 aa14.47□□□□□ -0.09
HDLBP-236ENST00000477477 CHRNDQ07001 517 aa14.47□□□□□ -0.09
HDLBP-236ENST00000477477 NBPF9Q3BBW0 867 aa14.47□□□□□ -0.09
HDLBP-236ENST00000477477 BEND3Q5T5X7 828 aa14.47□□□□□ -0.09
HDLBP-236ENST00000477477 OGFOD1Q8N543 542 aa14.47□□□□□ -0.09
HDLBP-236ENST00000477477 SAGE1Q9NXZ1 904 aa14.47□□□□□ -0.09
HDLBP-236ENST00000477477 ZNF646O15015 1829 aaPredicted RBP14.46□□□□□ -0.09
HDLBP-236ENST00000477477 WNT10BO00744 389 aa14.46□□□□□ -0.09
HDLBP-236ENST00000477477 KCNJ4P48050 445 aa14.46□□□□□ -0.09
HDLBP-236ENST00000477477 FOXO4P98177 505 aa14.46□□□□□ -0.09
HDLBP-236ENST00000477477 TTLL5Q6EMB2 1281 aa14.46□□□□□ -0.09
HDLBP-236ENST00000477477 RASAL3Q86YV0 1011 aa14.46□□□□□ -0.09
HDLBP-236ENST00000477477 MCOLN1Q9GZU1 580 aa14.46□□□□□ -0.09
HDLBP-236ENST00000477477 SCAF8Q9UPN6 1271 aaKnown RBP14.46□□□□□ -0.09
HDLBP-236ENST00000477477 PAPPA2Q9BXP8 1791 aa14.46□□□□□ -0.09
HDLBP-236ENST00000477477 IRS2Q9Y4H2 1338 aa14.45□□□□□ -0.1
HDLBP-236ENST00000477477 MMP14P50281 582 aa14.45□□□□□ -0.1
HDLBP-236ENST00000477477 IFIT5Q13325 482 aaKnown RBP14.45□□□□□ -0.1
HDLBP-236ENST00000477477 CACNA1FO60840 1977 aa14.44□□□□□ -0.1
HDLBP-236ENST00000477477 CCDC85CA6NKD9 419 aa14.44□□□□□ -0.1
HDLBP-236ENST00000477477 SASH1O94885 1247 aa14.44□□□□□ -0.1
HDLBP-236ENST00000477477 GTF2IP78347 998 aa14.44□□□□□ -0.1
HDLBP-236ENST00000477477 PRAMEF18Q5VWM3 479 aa14.44□□□□□ -0.1
HDLBP-236ENST00000477477 C15orf52Q6ZUT6 534 aaKnown RBP14.44□□□□□ -0.1
HDLBP-236ENST00000477477 MOB2Q70IA6 237 aa14.44□□□□□ -0.1
HDLBP-236ENST00000477477 KIAA0825Q8IV33 1275 aa14.44□□□□□ -0.1
HDLBP-236ENST00000477477 CSRNP1Q96S65 589 aa14.44□□□□□ -0.1
HDLBP-236ENST00000477477 CD209Q9NNX6 404 aa14.44□□□□□ -0.1
HDLBP-236ENST00000477477 RNF186Q9NXI6 227 aa14.44□□□□□ -0.1
HDLBP-236ENST00000477477 CHMP3Q9Y3E7 222 aa14.44□□□□□ -0.1
HDLBP-236ENST00000477477 SNAP23O00161 211 aa14.43□□□□□ -0.1
HDLBP-236ENST00000477477 GRM8O00222 908 aa14.43□□□□□ -0.1
HDLBP-236ENST00000477477 TAF5LO75529 589 aa14.43□□□□□ -0.1
HDLBP-236ENST00000477477 DGKZQ13574 1117 aa14.43□□□□□ -0.1
HDLBP-236ENST00000477477 EPHA10Q5JZY3 1008 aa14.43□□□□□ -0.1
HDLBP-236ENST00000477477 LMBR1LQ6UX01 489 aa14.43□□□□□ -0.1
HDLBP-236ENST00000477477 FAM9BQ8IZU0 186 aa14.43□□□□□ -0.1
HDLBP-236ENST00000477477 HELBQ8NG08 1087 aaPredicted RBP14.43□□□□□ -0.1
HDLBP-236ENST00000477477 HDAC9Q9UKV0 1011 aa14.43□□□□□ -0.1
HDLBP-236ENST00000477477 TRPA1O75762 1119 aa14.42□□□□□ -0.1
HDLBP-236ENST00000477477 NF2P35240 595 aa14.42□□□□□ -0.1
HDLBP-236ENST00000477477 REM2Q8IYK8 340 aaPredicted RBP14.42□□□□□ -0.1
HDLBP-236ENST00000477477 ZBED3Q96IU2 234 aaPredicted RBP14.42□□□□□ -0.1
HDLBP-236ENST00000477477 UBE2Q2LH0YL09 131 aa14.41□□□□□ -0.1
HDLBP-236ENST00000477477 ALDH1L1O75891 902 aa14.41□□□□□ -0.1
HDLBP-236ENST00000477477 CCDC57Q2TAC2 916 aa14.41□□□□□ -0.1
HDLBP-236ENST00000477477 APOBEC3FQ8IUX4 373 aaKnown RBP14.41□□□□□ -0.1
HDLBP-236ENST00000477477 CASP8AP2Q9UKL3 1982 aa14.41□□□□□ -0.1
HDLBP-236ENST00000477477 ZNF521Q96K83 1311 aa14.41□□□□□ -0.1
HDLBP-236ENST00000477477 IL1R1P14778 569 aa14.4□□□□□ -0.1
HDLBP-236ENST00000477477 TTLL12Q14166 644 aaPredicted RBP14.4□□□□□ -0.1
HDLBP-236ENST00000477477 TAF7LQ5H9L4 462 aa14.4□□□□□ -0.1
HDLBP-236ENST00000477477 ZNF804AQ7Z570 1209 aa14.4□□□□□ -0.1
HDLBP-236ENST00000477477 CERS5Q8N5B7 392 aa14.4□□□□□ -0.1
HDLBP-236ENST00000477477 ZNF594Q96JF6 807 aaPredicted RBP14.4□□□□□ -0.1
HDLBP-236ENST00000477477 SRCIN1Q9C0H9 1055 aa14.4□□□□□ -0.1
HDLBP-236ENST00000477477 C9orf78Q9NZ63 289 aaPredicted RBP14.4□□□□□ -0.1
HDLBP-236ENST00000477477 COL1A1P02452 1464 aaPredicted RBP14.39□□□□□ -0.11
HDLBP-236ENST00000477477 RGS19P49795 217 aa14.39□□□□□ -0.11
HDLBP-236ENST00000477477 SLC4A10Q6U841 1118 aa14.39□□□□□ -0.11
HDLBP-236ENST00000477477 LDHAL6AQ6ZMR3 332 aa14.39□□□□□ -0.11
HDLBP-236ENST00000477477 A0A1B0GUL6 1792 aa14.39□□□□□ -0.11
HDLBP-236ENST00000477477 FKBP1AP62942 108 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms