RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 PDE1AP54750 535 aa11.42□□□□□ -0.58
PGK1-204ENST00000477335 PUM3Q15397 648 aaKnown RBP11.42□□□□□ -0.58
PGK1-204ENST00000477335 TXNRD3Q86VQ6 643 aa11.42□□□□□ -0.58
PGK1-204ENST00000477335 PI4K2BQ8TCG2 481 aa11.42□□□□□ -0.58
PGK1-204ENST00000477335 CNKSR1Q969H4 720 aa11.42□□□□□ -0.58
PGK1-204ENST00000477335 XAGE2Q96GT9 111 aa11.42□□□□□ -0.58
PGK1-204ENST00000477335 FHDC1Q9C0D6 1143 aaPredicted RBP11.42□□□□□ -0.58
PGK1-204ENST00000477335 STAP2Q9UGK3 403 aa11.42□□□□□ -0.58
PGK1-204ENST00000477335 GSPT1P15170 499 aaKnown RBP11.41□□□□□ -0.58
PGK1-204ENST00000477335 MX1P20591 662 aa11.41□□□□□ -0.58
PGK1-204ENST00000477335 TTLL6Q8N841 843 aa11.41□□□□□ -0.58
PGK1-204ENST00000477335 POLLQ9UGP5 575 aa11.41□□□□□ -0.58
PGK1-204ENST00000477335 XDHP47989 1333 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 COL1A1P02452 1464 aaPredicted RBP11.4□□□□□ -0.58
PGK1-204ENST00000477335 C21orf2O43822 256 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 IFIT2P09913 472 aaKnown RBP11.4□□□□□ -0.58
PGK1-204ENST00000477335 PHKA1P46020 1223 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 SCARF1Q14162 830 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 TMC4Q7Z404 712 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 TBC1D16Q8TBP0 767 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 LPIN2Q92539 896 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 NEUROD6Q96NK8 337 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 ANKRD2Q9GZV1 360 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 OSBPL3Q9H4L5 887 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 PODXL2Q9NZ53 605 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 AKAP2Q9Y2D5 859 aa11.4□□□□□ -0.58
PGK1-204ENST00000477335 ZNF804BA4D1E1 1349 aa11.39□□□□□ -0.59
PGK1-204ENST00000477335 UFL1O94874 794 aa11.39□□□□□ -0.59
PGK1-204ENST00000477335 SLC5A1P13866 664 aa11.39□□□□□ -0.59
PGK1-204ENST00000477335 GYG1P46976 350 aa11.39□□□□□ -0.59
PGK1-204ENST00000477335 BCAMP50895 628 aa11.39□□□□□ -0.59
PGK1-204ENST00000477335 UBE4AQ14139 1066 aa11.39□□□□□ -0.59
PGK1-204ENST00000477335 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
PGK1-204ENST00000477335 FAM84BQ96KN1 310 aaPredicted RBP11.39□□□□□ -0.59
PGK1-204ENST00000477335 PIM2Q9P1W9 311 aa11.39□□□□□ -0.59
PGK1-204ENST00000477335 ANKIB1Q9P2G1 1089 aa11.39□□□□□ -0.59
PGK1-204ENST00000477335 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
PGK1-204ENST00000477335 NSFL1CQ9UNZ2 370 aaKnown RBP11.39□□□□□ -0.59
PGK1-204ENST00000477335 NDUFB9Q9Y6M9 179 aa11.39□□□□□ -0.59
PGK1-204ENST00000477335 MAP4K4O95819 1239 aaPredicted RBP11.38□□□□□ -0.59
PGK1-204ENST00000477335 ATP2B4P23634 1241 aa11.38□□□□□ -0.59
PGK1-204ENST00000477335 DALRD3Q5D0E6 543 aaKnown RBP11.38□□□□□ -0.59
PGK1-204ENST00000477335 TTC22Q5TAA0 569 aa11.38□□□□□ -0.59
PGK1-204ENST00000477335 CCDC102BQ68D86 513 aa11.38□□□□□ -0.59
PGK1-204ENST00000477335 PI16Q6UXB8 463 aa11.38□□□□□ -0.59
PGK1-204ENST00000477335 MPNDQ8N594 471 aa11.38□□□□□ -0.59
PGK1-204ENST00000477335 EDC3Q96F86 508 aaKnown RBP11.38□□□□□ -0.59
PGK1-204ENST00000477335 SYT17Q9BSW7 474 aa11.38□□□□□ -0.59
PGK1-204ENST00000477335 ECHDC1Q9NTX5 307 aa11.38□□□□□ -0.59
PGK1-204ENST00000477335 GGA1Q9UJY5 639 aa11.38□□□□□ -0.59
PGK1-204ENST00000477335 LEMD3Q9Y2U8 911 aa11.38□□□□□ -0.59
PGK1-204ENST00000477335 COL4A5P29400 1685 aa11.38□□□□□ -0.59
PGK1-204ENST00000477335 AOX1Q06278 1338 aa11.37□□□□□ -0.59
PGK1-204ENST00000477335 TTC41PQ6P2S7 1318 aa11.37□□□□□ -0.59
PGK1-204ENST00000477335 IFIT1P09914 478 aaKnown RBP11.37□□□□□ -0.59
PGK1-204ENST00000477335 ATP5JP18859 108 aa11.37□□□□□ -0.59
PGK1-204ENST00000477335 PRELPP51888 382 aa11.37□□□□□ -0.59
PGK1-204ENST00000477335 C15orf52Q6ZUT6 534 aaKnown RBP11.37□□□□□ -0.59
PGK1-204ENST00000477335 FBXO33Q7Z6M2 555 aa11.37□□□□□ -0.59
PGK1-204ENST00000477335 RTFDC1Q9BY42 306 aaPredicted RBP11.37□□□□□ -0.59
PGK1-204ENST00000477335 BOLA2Q9H3K6 86 aa11.37□□□□□ -0.59
PGK1-204ENST00000477335 ARID4AP29374 1257 aaPredicted RBP11.36□□□□□ -0.59
PGK1-204ENST00000477335 MCAMP43121 646 aa11.36□□□□□ -0.59
PGK1-204ENST00000477335 KCNJ4P48050 445 aa11.36□□□□□ -0.59
PGK1-204ENST00000477335 RASGRF1Q13972 1273 aa11.36□□□□□ -0.59
PGK1-204ENST00000477335 CCDC93Q567U6 631 aa11.36□□□□□ -0.59
PGK1-204ENST00000477335 DPP8Q6V1X1 898 aaPredicted RBP11.36□□□□□ -0.59
PGK1-204ENST00000477335 SNRKQ9NRH2 765 aa11.36□□□□□ -0.59
PGK1-204ENST00000477335 IQSEC3Q9UPP2 1182 aaPredicted RBP11.36□□□□□ -0.59
PGK1-204ENST00000477335 BCS1LQ9Y276 419 aa11.36□□□□□ -0.59
PGK1-204ENST00000477335 MED23Q9ULK4 1368 aa11.36□□□□□ -0.59
PGK1-204ENST00000477335 AKAP11Q9UKA4 1901 aa11.35□□□□□ -0.59
PGK1-204ENST00000477335 C6orf229H3BNL8 230 aa11.35□□□□□ -0.59
PGK1-204ENST00000477335 NFKBIEO00221 500 aa11.35□□□□□ -0.59
PGK1-204ENST00000477335 RIMBP2O15034 1052 aa11.35□□□□□ -0.59
PGK1-204ENST00000477335 GLRX3O76003 335 aaKnown RBP11.35□□□□□ -0.59
PGK1-204ENST00000477335 CHGBP05060 677 aa11.35□□□□□ -0.59
PGK1-204ENST00000477335 SDSP20132 328 aa11.35□□□□□ -0.59
PGK1-204ENST00000477335 ZAP70P43403 619 aa11.35□□□□□ -0.59
PGK1-204ENST00000477335 TTC39AQ5SRH9 613 aa11.35□□□□□ -0.59
PGK1-204ENST00000477335 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
PGK1-204ENST00000477335 HAUS7Q99871 368 aa11.35□□□□□ -0.59
PGK1-204ENST00000477335 ANTXR1Q9H6X2 564 aa11.35□□□□□ -0.59
PGK1-204ENST00000477335 HMG20BQ9P0W2 317 aa11.35□□□□□ -0.59
PGK1-204ENST00000477335 YBX3P16989 372 aaKnown RBP eCLIP11.34□□□□□ -0.596e-13■■□□□ 13.2
PGK1-204ENST00000477335 HIBADHP31937 336 aaKnown RBP11.34□□□□□ -0.59
PGK1-204ENST00000477335 RASSF7Q02833 373 aa11.34□□□□□ -0.59
PGK1-204ENST00000477335 BMP2KLQ5H9B9 411 aa11.34□□□□□ -0.59
PGK1-204ENST00000477335 GORABQ5T7V8 394 aa11.34□□□□□ -0.59
PGK1-204ENST00000477335 CC2D2BQ6DHV5 1058 aa11.34□□□□□ -0.59
PGK1-204ENST00000477335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.34□□□□□ -0.59
PGK1-204ENST00000477335 ZNF277Q9NRM2 450 aaPredicted RBP11.34□□□□□ -0.59
PGK1-204ENST00000477335 ARFGEF1Q9Y6D6 1849 aa11.34□□□□□ -0.59
PGK1-204ENST00000477335 FER1L6Q2WGJ9 1857 aa11.34□□□□□ -0.59
PGK1-204ENST00000477335 SRCAPQ6ZRS2 3230 aa11.33□□□□□ -0.59
PGK1-204ENST00000477335 FKBP4Q02790 459 aaKnown RBP eCLIP11.33□□□□□ -0.6
PGK1-204ENST00000477335 AOC3Q16853 763 aa11.33□□□□□ -0.6
PGK1-204ENST00000477335 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
PGK1-204ENST00000477335 CCDC158Q5M9N0 1113 aa11.33□□□□□ -0.6
PGK1-204ENST00000477335 TDRD7Q8NHU6 1098 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms