RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 BBOX1O75936 387 aa34.93■■■■□ 3.18
VEGFA-211ENST00000476772 ZAP70P43403 619 aa34.93■■■■□ 3.18
VEGFA-211ENST00000476772 KCNJ4P48050 445 aa34.93■■■■□ 3.18
VEGFA-211ENST00000476772 ANTXR1Q9H6X2 564 aa34.93■■■■□ 3.18
VEGFA-211ENST00000476772 SGSM2O43147 1006 aa34.92■■■■□ 3.18
VEGFA-211ENST00000476772 NPR1P16066 1061 aa34.92■■■■□ 3.18
VEGFA-211ENST00000476772 BCAMP50895 628 aa34.92■■■■□ 3.18
VEGFA-211ENST00000476772 USP26Q9BXU7 913 aa34.92■■■■□ 3.18
VEGFA-211ENST00000476772 RBM25P49756 843 aaKnown RBP34.91■■■■□ 3.18
VEGFA-211ENST00000476772 NMIQ13287 307 aaPredicted RBP34.91■■■■□ 3.18
VEGFA-211ENST00000476772 RUFY2Q8WXA3 655 aa34.91■■■■□ 3.18
VEGFA-211ENST00000476772 FAM227BQ96M60 508 aa34.9■■■■□ 3.18
VEGFA-211ENST00000476772 ZNF804BA4D1E1 1349 aa34.89■■■■□ 3.18
VEGFA-211ENST00000476772 LRRC37AA6NMS7 1700 aa34.89■■■■□ 3.18
VEGFA-211ENST00000476772 ANKIB1Q9P2G1 1089 aa34.89■■■■□ 3.18
VEGFA-211ENST00000476772 GYG1P46976 350 aa34.89■■■■□ 3.18
VEGFA-211ENST00000476772 MASTLQ96GX5 879 aa34.89■■■■□ 3.18
VEGFA-211ENST00000476772 ANO2Q9NQ90 1003 aa34.89■■■■□ 3.18
VEGFA-211ENST00000476772 XDHP47989 1333 aa34.88■■■■□ 3.17
VEGFA-211ENST00000476772 PPEF1O14829 653 aaPredicted RBP34.88■■■■□ 3.17
VEGFA-211ENST00000476772 KLRK1P26718 216 aa34.88■■■■□ 3.17
VEGFA-211ENST00000476772 HMG20BQ9P0W2 317 aa34.88■■■■□ 3.17
VEGFA-211ENST00000476772 A0A0D9SFI3 127 aa34.87■■■■□ 3.17
VEGFA-211ENST00000476772 RASGRF1Q13972 1273 aa34.87■■■■□ 3.17
VEGFA-211ENST00000476772 C2CD5Q86YS7 1000 aa34.87■■■■□ 3.17
VEGFA-211ENST00000476772 CHGBP05060 677 aa34.86■■■■□ 3.17
VEGFA-211ENST00000476772 GPSM2P81274 684 aa34.86■■■■□ 3.17
VEGFA-211ENST00000476772 CAVIN4Q5BKX8 364 aa34.86■■■■□ 3.17
VEGFA-211ENST00000476772 TMC4Q7Z404 712 aa34.86■■■■□ 3.17
VEGFA-211ENST00000476772 FAM84BQ96KN1 310 aaPredicted RBP34.86■■■■□ 3.17
VEGFA-211ENST00000476772 LEMD3Q9Y2U8 911 aa34.86■■■■□ 3.17
VEGFA-211ENST00000476772 CYP2E1P05181 493 aaPredicted RBP34.85■■■■□ 3.17
VEGFA-211ENST00000476772 SPATA5Q8NB90 893 aa34.85■■■■□ 3.17
VEGFA-211ENST00000476772 RAD50Q92878 1312 aa34.84■■■■□ 3.17
VEGFA-211ENST00000476772 ALDH1B1P30837 517 aa34.84■■■■□ 3.17
VEGFA-211ENST00000476772 CACNA1SQ13698 1873 aa34.84■■■■□ 3.17
VEGFA-211ENST00000476772 TICAM2Q86XR7 235 aa34.83■■■■□ 3.17
VEGFA-211ENST00000476772 C10orf71Q711Q0 1435 aa34.83■■■■□ 3.17
VEGFA-211ENST00000476772 IRS2Q9Y4H2 1338 aa34.83■■■■□ 3.17
VEGFA-211ENST00000476772 H0YIN7 160 aa34.82■■■■□ 3.17
VEGFA-211ENST00000476772 ZNF622Q969S3 477 aaKnown RBP eCLIP34.82■■■■□ 3.173e-13■□□□□ 10.7
VEGFA-211ENST00000476772 NSFL1CQ9UNZ2 370 aaKnown RBP34.82■■■■□ 3.17
VEGFA-211ENST00000476772 ZBTB7AO95365 584 aa34.82■■■■□ 3.16
VEGFA-211ENST00000476772 FBXO33Q7Z6M2 555 aa34.82■■■■□ 3.16
VEGFA-211ENST00000476772 VPS37DQ86XT2 251 aa34.82■■■■□ 3.16
VEGFA-211ENST00000476772 SP8Q8IXZ3 490 aa34.82■■■■□ 3.16
VEGFA-211ENST00000476772 GNL3LQ9NVN8 582 aaKnown RBP34.82■■■■□ 3.16
VEGFA-211ENST00000476772 R3HDM1Q15032 1099 aaKnown RBP34.81■■■■□ 3.16
VEGFA-211ENST00000476772 TTF1Q15361 905 aaPredicted RBP34.81■■■■□ 3.16
VEGFA-211ENST00000476772 PIH1D3Q9NQM4 214 aaKnown RBP34.81■■■■□ 3.16
VEGFA-211ENST00000476772 IQSEC3Q9UPP2 1182 aaPredicted RBP34.81■■■■□ 3.16
VEGFA-211ENST00000476772 ATP6V0A2Q9Y487 856 aa34.81■■■■□ 3.16
VEGFA-211ENST00000476772 MYH7P12883 1935 aa34.81■■■■□ 3.16
VEGFA-211ENST00000476772 MED23Q9ULK4 1368 aa34.8■■■■□ 3.16
VEGFA-211ENST00000476772 LTBP1Q14766 1721 aa34.8■■■■□ 3.16
VEGFA-211ENST00000476772 STYK1Q6J9G0 422 aa34.8■■■■□ 3.16
VEGFA-211ENST00000476772 TXNRD3Q86VQ6 643 aa34.8■■■■□ 3.16
VEGFA-211ENST00000476772 LSG1Q9H089 658 aaKnown RBP34.8■■■■□ 3.16
VEGFA-211ENST00000476772 MYO5AQ9Y4I1 1855 aaKnown RBP34.8■■■■□ 3.16
VEGFA-211ENST00000476772 CHRNA5P30532 468 aa34.79■■■■□ 3.16
VEGFA-211ENST00000476772 SLFNL1Q499Z3 407 aa34.79■■■■□ 3.16
VEGFA-211ENST00000476772 KIAA1211Q6ZU35 1233 aa34.79■■■■□ 3.16
VEGFA-211ENST00000476772 PODXL2Q9NZ53 605 aa34.79■■■■□ 3.16
VEGFA-211ENST00000476772 RNF113AO15541 343 aaKnown RBP34.79■■■■□ 3.16
VEGFA-211ENST00000476772 ATP2B4P23634 1241 aa34.79■■■■□ 3.16
VEGFA-211ENST00000476772 GGA1Q9UJY5 639 aa34.79■■■■□ 3.16
VEGFA-211ENST00000476772 COL1A1P02452 1464 aaPredicted RBP34.78■■■■□ 3.16
VEGFA-211ENST00000476772 UFL1O94874 794 aa34.78■■■■□ 3.16
VEGFA-211ENST00000476772 HIBADHP31937 336 aaKnown RBP34.78■■■■□ 3.16
VEGFA-211ENST00000476772 LRRFIP1Q32MZ4 808 aaKnown RBP34.78■■■■□ 3.16
VEGFA-211ENST00000476772 SEC62Q99442 399 aaKnown RBP34.78■■■■□ 3.16
VEGFA-211ENST00000476772 DOCK2Q92608 1830 aa34.77■■■■□ 3.16
VEGFA-211ENST00000476772 EPB41L2O43491 1005 aaKnown RBP34.77■■■■□ 3.16
VEGFA-211ENST00000476772 ZNF589Q86UQ0 364 aaPredicted RBP34.77■■■■□ 3.16
VEGFA-211ENST00000476772 GPR101Q96P66 508 aaPredicted RBP34.77■■■■□ 3.16
VEGFA-211ENST00000476772 KIF2CQ99661 725 aa34.77■■■■□ 3.16
VEGFA-211ENST00000476772 ZMYM1Q5SVZ6 1142 aa34.76■■■■□ 3.16
VEGFA-211ENST00000476772 MYH13Q9UKX3 1938 aa34.76■■■■□ 3.15
VEGFA-211ENST00000476772 MTFR1LQ9H019 292 aa34.76■■■■□ 3.15
VEGFA-211ENST00000476772 ZFYP08048 801 aaPredicted RBP34.75■■■■□ 3.15
VEGFA-211ENST00000476772 MCMDC2Q4G0Z9 681 aa34.75■■■■□ 3.15
VEGFA-211ENST00000476772 DDRGK1Q96HY6 314 aa34.75■■■■□ 3.15
VEGFA-211ENST00000476772 IPO9Q96P70 1041 aaKnown RBP34.75■■■■□ 3.15
VEGFA-211ENST00000476772 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.75■■■■□ 3.151e-12■■■□□ 16.3
VEGFA-211ENST00000476772 ATF5Q9Y2D1 282 aaPredicted RBP34.75■■■■□ 3.15
VEGFA-211ENST00000476772 CCDC171Q6TFL3 1326 aa34.74■■■■□ 3.15
VEGFA-211ENST00000476772 PTH1RQ03431 593 aa34.74■■■■□ 3.15
VEGFA-211ENST00000476772 OLFM4Q6UX06 510 aa34.74■■■■□ 3.15
VEGFA-211ENST00000476772 C15orf52Q6ZUT6 534 aaKnown RBP34.74■■■■□ 3.15
VEGFA-211ENST00000476772 HELLSQ9NRZ9 838 aa34.74■■■■□ 3.15
VEGFA-211ENST00000476772 IDH1O75874 414 aaKnown RBP34.73■■■■□ 3.15
VEGFA-211ENST00000476772 CCDC129Q6ZRS4 1044 aa34.73■■■■□ 3.15
VEGFA-211ENST00000476772 TBC1D16Q8TBP0 767 aa34.73■■■■□ 3.15
VEGFA-211ENST00000476772 POLLQ9UGP5 575 aa34.73■■■■□ 3.15
VEGFA-211ENST00000476772 DENND2AQ9ULE3 1009 aa34.73■■■■□ 3.15
VEGFA-211ENST00000476772 SLX4Q8IY92 1834 aa34.73■■■■□ 3.15
VEGFA-211ENST00000476772 DLEC1Q9Y238 1755 aa34.73■■■■□ 3.15
VEGFA-211ENST00000476772 SEMA3EO15041 775 aa34.72■■■■□ 3.15
VEGFA-211ENST00000476772 MCCP23508 829 aa34.72■■■■□ 3.15
VEGFA-211ENST00000476772 PRPF40BQ6NWY9 871 aaKnown RBP34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms