RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
HMGCS2-203ENST00000476640 MMP14P50281 582 aa17.05■□□□□ 0.32
HMGCS2-203ENST00000476640 CCDC102AQ96A19 550 aa17.05■□□□□ 0.32
HMGCS2-203ENST00000476640 MPHOSPH8Q99549 860 aa17.05■□□□□ 0.32
HMGCS2-203ENST00000476640 LEMD3Q9Y2U8 911 aa17.05■□□□□ 0.32
HMGCS2-203ENST00000476640 ZNF646O15015 1829 aaPredicted RBP17.05■□□□□ 0.32
HMGCS2-203ENST00000476640 ADM5C9JUS6 153 aa17.04■□□□□ 0.32
HMGCS2-203ENST00000476640 RGMBQ6NW40 437 aa17.04■□□□□ 0.32
HMGCS2-203ENST00000476640 OGFOD1Q8N543 542 aa17.04■□□□□ 0.32
HMGCS2-203ENST00000476640 COA1Q9GZY4 146 aa17.04■□□□□ 0.32
HMGCS2-203ENST00000476640 MYOZ2Q9NPC6 264 aa17.04■□□□□ 0.32
HMGCS2-203ENST00000476640 PITPNM2Q9BZ72 1349 aa17.03■□□□□ 0.32
HMGCS2-203ENST00000476640 ITGA6P23229 1130 aa17.03■□□□□ 0.32
HMGCS2-203ENST00000476640 SCARF1Q14162 830 aa17.03■□□□□ 0.32
HMGCS2-203ENST00000476640 GMLQ99445 158 aa17.03■□□□□ 0.32
HMGCS2-203ENST00000476640 SALL2Q9Y467 1007 aaPredicted RBP17.03■□□□□ 0.32
HMGCS2-203ENST00000476640 A0A1B0GUL6 1792 aa17.02■□□□□ 0.32
HMGCS2-203ENST00000476640 PAPPA2Q9BXP8 1791 aa17.02■□□□□ 0.32
HMGCS2-203ENST00000476640 VAMP4O75379 141 aa17.02■□□□□ 0.32
HMGCS2-203ENST00000476640 KCNJ4P48050 445 aa17.02■□□□□ 0.32
HMGCS2-203ENST00000476640 ZNF157P51786 506 aaPredicted RBP17.02■□□□□ 0.32
HMGCS2-203ENST00000476640 EXOSC9Q06265 439 aaKnown RBP17.02■□□□□ 0.32
HMGCS2-203ENST00000476640 STRIP1Q5VSL9 837 aa17.02■□□□□ 0.32
HMGCS2-203ENST00000476640 ANGEL2Q5VTE6 544 aaKnown RBP17.02■□□□□ 0.32
HMGCS2-203ENST00000476640 CDCA5Q96FF9 252 aa17.02■□□□□ 0.32
HMGCS2-203ENST00000476640 ABHD8Q96I13 439 aa17.02■□□□□ 0.32
HMGCS2-203ENST00000476640 ZNF804BA4D1E1 1349 aa17.01■□□□□ 0.31
HMGCS2-203ENST00000476640 ANKRD18BA2A2Z9 1011 aa17.01■□□□□ 0.31
HMGCS2-203ENST00000476640 CSF1RP07333 972 aa17.01■□□□□ 0.31
HMGCS2-203ENST00000476640 FKBP1BP68106 108 aa17.01■□□□□ 0.31
HMGCS2-203ENST00000476640 FAM161AQ3B820 660 aa17.01■□□□□ 0.31
HMGCS2-203ENST00000476640 DLK2Q6UY11 383 aa17.01■□□□□ 0.31
HMGCS2-203ENST00000476640 FBXW7Q969H0 707 aa17.01■□□□□ 0.31
HMGCS2-203ENST00000476640 CASP7P55210 303 aa17■□□□□ 0.31
HMGCS2-203ENST00000476640 TSKSQ9UJT2 592 aa17■□□□□ 0.31
HMGCS2-203ENST00000476640 ECM29Q5VYK3 1845 aa17■□□□□ 0.31
HMGCS2-203ENST00000476640 ASTN2O75129 1339 aaPredicted RBP16.99■□□□□ 0.31
HMGCS2-203ENST00000476640 IFIT5Q13325 482 aaKnown RBP16.99■□□□□ 0.31
HMGCS2-203ENST00000476640 DACT2Q5SW24 774 aa16.99■□□□□ 0.31
HMGCS2-203ENST00000476640 REM2Q8IYK8 340 aaPredicted RBP16.99■□□□□ 0.31
HMGCS2-203ENST00000476640 SAGE1Q9NXZ1 904 aa16.99■□□□□ 0.31
HMGCS2-203ENST00000476640 FAM155AB1AL88 458 aaPredicted RBP16.98■□□□□ 0.31
HMGCS2-203ENST00000476640 TTLL5Q6EMB2 1281 aa16.98■□□□□ 0.31
HMGCS2-203ENST00000476640 HDAC9Q9UKV0 1011 aa16.98■□□□□ 0.31
HMGCS2-203ENST00000476640 WTIPA6NIX2 430 aaPredicted RBP16.97■□□□□ 0.31
HMGCS2-203ENST00000476640 SLC10A3P09131 477 aa16.97■□□□□ 0.31
HMGCS2-203ENST00000476640 NF2P35240 595 aa16.97■□□□□ 0.31
HMGCS2-203ENST00000476640 CHRNDQ07001 517 aa16.97■□□□□ 0.31
HMGCS2-203ENST00000476640 FAM9BQ8IZU0 186 aa16.97■□□□□ 0.31
HMGCS2-203ENST00000476640 CHMP3Q9Y3E7 222 aa16.97■□□□□ 0.31
HMGCS2-203ENST00000476640 KIF23Q02241 960 aaPredicted RBP16.96■□□□□ 0.31
HMGCS2-203ENST00000476640 BEND3Q5T5X7 828 aa16.96■□□□□ 0.31
HMGCS2-203ENST00000476640 TXNRD3Q86VQ6 643 aa16.96■□□□□ 0.31
HMGCS2-203ENST00000476640 F6X3S4 739 aa16.95■□□□□ 0.3
HMGCS2-203ENST00000476640 GRM8O00222 908 aa16.95■□□□□ 0.3
HMGCS2-203ENST00000476640 FOXO4P98177 505 aa16.95■□□□□ 0.3
HMGCS2-203ENST00000476640 CCDC57Q2TAC2 916 aa16.95■□□□□ 0.3
HMGCS2-203ENST00000476640 NBPF9Q3BBW0 867 aa16.95■□□□□ 0.3
HMGCS2-203ENST00000476640 TAF7LQ5H9L4 462 aa16.95■□□□□ 0.3
HMGCS2-203ENST00000476640 ZIC5Q96T25 663 aa16.95■□□□□ 0.3
HMGCS2-203ENST00000476640 C9orf78Q9NZ63 289 aaPredicted RBP16.95■□□□□ 0.3
HMGCS2-203ENST00000476640 CCDC85CA6NKD9 419 aa16.94■□□□□ 0.3
HMGCS2-203ENST00000476640 WNT10BO00744 389 aa16.94■□□□□ 0.3
HMGCS2-203ENST00000476640 ALDH1L1O75891 902 aa16.94■□□□□ 0.3
HMGCS2-203ENST00000476640 GTF2IP78347 998 aa16.94■□□□□ 0.3
HMGCS2-203ENST00000476640 C15orf52Q6ZUT6 534 aaKnown RBP16.94■□□□□ 0.3
HMGCS2-203ENST00000476640 ZNF804AQ7Z570 1209 aa16.94■□□□□ 0.3
HMGCS2-203ENST00000476640 APOBEC3FQ8IUX4 373 aaKnown RBP16.94■□□□□ 0.3
HMGCS2-203ENST00000476640 MXD3Q9BW11 206 aa16.94■□□□□ 0.3
HMGCS2-203ENST00000476640 TTLL12Q14166 644 aaPredicted RBP16.93■□□□□ 0.3
HMGCS2-203ENST00000476640 LMBR1LQ6UX01 489 aa16.93■□□□□ 0.3
HMGCS2-203ENST00000476640 KIAA0825Q8IV33 1275 aa16.93■□□□□ 0.3
HMGCS2-203ENST00000476640 CD209Q9NNX6 404 aa16.93■□□□□ 0.3
HMGCS2-203ENST00000476640 KLRK1P26718 216 aa16.92■□□□□ 0.3
HMGCS2-203ENST00000476640 DGKZQ13574 1117 aa16.92■□□□□ 0.3
HMGCS2-203ENST00000476640 SLC4A10Q6U841 1118 aa16.92■□□□□ 0.3
HMGCS2-203ENST00000476640 LDHAL6AQ6ZMR3 332 aa16.92■□□□□ 0.3
HMGCS2-203ENST00000476640 RASAL3Q86YV0 1011 aa16.92■□□□□ 0.3
HMGCS2-203ENST00000476640 SRCIN1Q9C0H9 1055 aa16.92■□□□□ 0.3
HMGCS2-203ENST00000476640 MCOLN1Q9GZU1 580 aa16.92■□□□□ 0.3
HMGCS2-203ENST00000476640 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
HMGCS2-203ENST00000476640 CNNM1Q9NRU3 951 aa16.92■□□□□ 0.3
HMGCS2-203ENST00000476640 RNF186Q9NXI6 227 aa16.92■□□□□ 0.3
HMGCS2-203ENST00000476640 COL1A1P02452 1464 aaPredicted RBP16.92■□□□□ 0.3
HMGCS2-203ENST00000476640 TAF5LO75529 589 aa16.91■□□□□ 0.3
HMGCS2-203ENST00000476640 TRPA1O75762 1119 aa16.91■□□□□ 0.3
HMGCS2-203ENST00000476640 SASH1O94885 1247 aa16.91■□□□□ 0.3
HMGCS2-203ENST00000476640 DLGAP5Q15398 846 aa16.91■□□□□ 0.3
HMGCS2-203ENST00000476640 HELBQ8NG08 1087 aaPredicted RBP16.91■□□□□ 0.3
HMGCS2-203ENST00000476640 CSRNP1Q96S65 589 aa16.91■□□□□ 0.3
HMGCS2-203ENST00000476640 MYO1BO43795 1136 aa16.9■□□□□ 0.3
HMGCS2-203ENST00000476640 ARMC9Q7Z3E5 817 aa16.9■□□□□ 0.3
HMGCS2-203ENST00000476640 ARAP2Q8WZ64 1704 aa16.9■□□□□ 0.3
HMGCS2-203ENST00000476640 UBE2Q2LH0YL09 131 aa16.89■□□□□ 0.29
HMGCS2-203ENST00000476640 IL1R1P14778 569 aa16.89■□□□□ 0.29
HMGCS2-203ENST00000476640 FKBP1AP62942 108 aaKnown RBP16.89■□□□□ 0.29
HMGCS2-203ENST00000476640 SCAF8Q9UPN6 1271 aaKnown RBP16.89■□□□□ 0.29
HMGCS2-203ENST00000476640 PLIN1O60240 522 aa16.88■□□□□ 0.29
HMGCS2-203ENST00000476640 PRAMEF18Q5VWM3 479 aa16.88■□□□□ 0.29
HMGCS2-203ENST00000476640 MTMR14Q8NCE2 650 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms