RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 GRAPLQ8TC17 118 aaPredicted RBP8.64□□□□□ -1.03
CLDN4-205ENST00000476494 SLC10A4Q96EP9 437 aa8.64□□□□□ -1.03
CLDN4-205ENST00000476494 CACNA1AO00555 2505 aa8.64□□□□□ -1.03
CLDN4-205ENST00000476494 WNT10BO00744 389 aa8.63□□□□□ -1.03
CLDN4-205ENST00000476494 FARP2O94887 1054 aaPredicted RBP8.63□□□□□ -1.03
CLDN4-205ENST00000476494 USP17L8P0C7I0 530 aa8.63□□□□□ -1.03
CLDN4-205ENST00000476494 CCL5P13501 91 aa8.63□□□□□ -1.03
CLDN4-205ENST00000476494 PRKG1Q13976 671 aa8.63□□□□□ -1.03
CLDN4-205ENST00000476494 ANGEL1Q9UNK9 670 aaKnown RBP8.63□□□□□ -1.03
CLDN4-205ENST00000476494 UNCXA6NJT0 531 aa8.62□□□□□ -1.03
CLDN4-205ENST00000476494 BTBD11A6QL63 1104 aa8.62□□□□□ -1.03
CLDN4-205ENST00000476494 GNAT3A8MTJ3 354 aa8.62□□□□□ -1.03
CLDN4-205ENST00000476494 SGPL1O95470 568 aa8.62□□□□□ -1.03
CLDN4-205ENST00000476494 NF2P35240 595 aa8.62□□□□□ -1.03
CLDN4-205ENST00000476494 MAGEA10P43363 369 aaPredicted RBP8.62□□□□□ -1.03
CLDN4-205ENST00000476494 DDX10Q13206 875 aaKnown RBP8.62□□□□□ -1.03
CLDN4-205ENST00000476494 ARHGEF6Q15052 776 aa8.62□□□□□ -1.03
CLDN4-205ENST00000476494 OTUD7BQ6GQQ9 843 aa8.62□□□□□ -1.03
CLDN4-205ENST00000476494 U2AF1L4Q8WU68 220 aaKnown RBP8.62□□□□□ -1.03
CLDN4-205ENST00000476494 IRS2Q9Y4H2 1338 aa8.61□□□□□ -1.03
CLDN4-205ENST00000476494 TMEM265A0A087WTH1 108 aa8.61□□□□□ -1.03
CLDN4-205ENST00000476494 GNRH1P01148 92 aa8.61□□□□□ -1.03
CLDN4-205ENST00000476494 PRMT2P55345 433 aa8.61□□□□□ -1.03
CLDN4-205ENST00000476494 GPSM2P81274 684 aa8.61□□□□□ -1.03
CLDN4-205ENST00000476494 LACTBP83111 547 aaPredicted RBP8.61□□□□□ -1.03
CLDN4-205ENST00000476494 GIGYF2Q6Y7W6 1299 aaKnown RBP8.61□□□□□ -1.03
CLDN4-205ENST00000476494 TMC4Q7Z404 712 aa8.61□□□□□ -1.03
CLDN4-205ENST00000476494 MAFAQ8NHW3 353 aaPredicted RBP8.61□□□□□ -1.03
CLDN4-205ENST00000476494 TBC1D16Q8TBP0 767 aa8.61□□□□□ -1.03
CLDN4-205ENST00000476494 BRI3BPQ8WY22 251 aa8.61□□□□□ -1.03
CLDN4-205ENST00000476494 ZBED3Q96IU2 234 aaPredicted RBP8.61□□□□□ -1.03
CLDN4-205ENST00000476494 CDX2Q99626 313 aaPredicted RBP8.61□□□□□ -1.03
CLDN4-205ENST00000476494 NSFL1CQ9UNZ2 370 aaKnown RBP8.61□□□□□ -1.03
CLDN4-205ENST00000476494 MUC6Q6W4X9 2439 aa8.6□□□□□ -1.03
CLDN4-205ENST00000476494 PPP1R42Q7Z4L9 355 aa8.6□□□□□ -1.03
CLDN4-205ENST00000476494 FAM161BQ96MY7 647 aa8.6□□□□□ -1.03
CLDN4-205ENST00000476494 RNF208Q9H0X6 261 aa8.6□□□□□ -1.03
CLDN4-205ENST00000476494 ZMYND8Q9ULU4 1186 aaPredicted RBP8.6□□□□□ -1.03
CLDN4-205ENST00000476494 BDP1A6H8Y1 2624 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 C6orf229H3BNL8 230 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 TLR2O60603 784 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 HCLS1P14317 486 aaPredicted RBP8.59□□□□□ -1.03
CLDN4-205ENST00000476494 GRK4P32298 578 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 PARP10Q53GL7 1025 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 TJAP1Q5JTD0 557 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 DDX46Q7L014 1031 aaKnown RBP8.59□□□□□ -1.03
CLDN4-205ENST00000476494 LRP10Q7Z4F1 713 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 FAM43AQ8N2R8 423 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 CELF1Q92879 486 aaKnown RBP8.59□□□□□ -1.03
CLDN4-205ENST00000476494 UTP14AQ9BVJ6 771 aaKnown RBP8.59□□□□□ -1.03
CLDN4-205ENST00000476494 CRISPLD2Q9H0B8 497 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 PODXL2Q9NZ53 605 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 SRRDQ9UH36 339 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 RIPOR2Q9Y4F9 1068 aa8.59□□□□□ -1.03
CLDN4-205ENST00000476494 COL3A1P02461 1466 aaPredicted RBP8.58□□□□□ -1.04
CLDN4-205ENST00000476494 USP2O75604 605 aaPredicted RBP8.58□□□□□ -1.04
CLDN4-205ENST00000476494 TAF1CQ15572 869 aaPredicted RBP8.58□□□□□ -1.04
CLDN4-205ENST00000476494 NGEFQ8N5V2 710 aa8.58□□□□□ -1.04
CLDN4-205ENST00000476494 PAWRQ96IZ0 340 aaKnown RBP8.58□□□□□ -1.04
CLDN4-205ENST00000476494 TRIM47Q96LD4 638 aa8.58□□□□□ -1.04
CLDN4-205ENST00000476494 EYA3Q99504 573 aa8.58□□□□□ -1.04
CLDN4-205ENST00000476494 UNC93B1Q9H1C4 597 aa8.58□□□□□ -1.04
CLDN4-205ENST00000476494 SEMA6BQ9H3T3 888 aa8.58□□□□□ -1.04
CLDN4-205ENST00000476494 ZFYVE28Q9HCC9 887 aa8.58□□□□□ -1.04
CLDN4-205ENST00000476494 OTOFQ9HC10 1997 aa8.57□□□□□ -1.04
CLDN4-205ENST00000476494 ANP32CO43423 234 aa8.57□□□□□ -1.04
CLDN4-205ENST00000476494 SYN1P17600 705 aa8.57□□□□□ -1.04
CLDN4-205ENST00000476494 CAPN2P17655 700 aa8.57□□□□□ -1.04
CLDN4-205ENST00000476494 DIS3LQ8TF46 1054 aaKnown RBP8.57□□□□□ -1.04
CLDN4-205ENST00000476494 UBE2OQ9C0C9 1292 aaKnown RBP8.57□□□□□ -1.04
CLDN4-205ENST00000476494 ZC3H12CQ9C0D7 883 aaKnown RBP8.57□□□□□ -1.04
CLDN4-205ENST00000476494 OSBPP22059 807 aa8.56□□□□□ -1.04
CLDN4-205ENST00000476494 DACT2Q5SW24 774 aa8.56□□□□□ -1.04
CLDN4-205ENST00000476494 C17orf99Q6UX52 265 aa8.56□□□□□ -1.04
CLDN4-205ENST00000476494 APOBEC3FQ8IUX4 373 aaKnown RBP8.56□□□□□ -1.04
CLDN4-205ENST00000476494 C7orf61Q8IZ16 206 aa8.56□□□□□ -1.04
CLDN4-205ENST00000476494 CNKSR2Q8WXI2 1034 aa8.56□□□□□ -1.04
CLDN4-205ENST00000476494 POLR3GLQ9BT43 218 aa8.56□□□□□ -1.04
CLDN4-205ENST00000476494 MXD3Q9BW11 206 aa8.56□□□□□ -1.04
CLDN4-205ENST00000476494 DEFB129Q9H1M3 183 aa8.56□□□□□ -1.04
CLDN4-205ENST00000476494 PAK6Q9NQU5 681 aaPredicted RBP8.56□□□□□ -1.04
CLDN4-205ENST00000476494 DOCK3Q8IZD9 2030 aa8.56□□□□□ -1.04
CLDN4-205ENST00000476494 USP17L3A6NCW0 530 aa8.55□□□□□ -1.04
CLDN4-205ENST00000476494 USP17L4A6NCW7 530 aa8.55□□□□□ -1.04
CLDN4-205ENST00000476494 SASH1O94885 1247 aa8.55□□□□□ -1.04
CLDN4-205ENST00000476494 SF3B3Q15393 1217 aaKnown RBP8.55□□□□□ -1.04
CLDN4-205ENST00000476494 KIF6Q6ZMV9 814 aa8.55□□□□□ -1.04
CLDN4-205ENST00000476494 USP17L1Q7RTZ2 530 aa8.55□□□□□ -1.04
CLDN4-205ENST00000476494 USP38Q8NB14 1042 aa8.55□□□□□ -1.04
CLDN4-205ENST00000476494 GAS2L2Q8NHY3 880 aa8.55□□□□□ -1.04
CLDN4-205ENST00000476494 MYLIPQ8WY64 445 aa8.55□□□□□ -1.04
CLDN4-205ENST00000476494 TTYH1Q9H313 450 aaPredicted RBP8.55□□□□□ -1.04
CLDN4-205ENST00000476494 COL1A1P02452 1464 aaPredicted RBP8.55□□□□□ -1.04
CLDN4-205ENST00000476494 PPP1R12BO60237 982 aaPredicted RBP8.54□□□□□ -1.04
CLDN4-205ENST00000476494 ECM2O94769 699 aaPredicted RBP8.54□□□□□ -1.04
CLDN4-205ENST00000476494 PSMC4P43686 418 aa8.54□□□□□ -1.04
CLDN4-205ENST00000476494 PODNQ7Z5L7 613 aa8.54□□□□□ -1.04
CLDN4-205ENST00000476494 ALYREFQ86V81 257 aaKnown RBP8.54□□□□□ -1.04
CLDN4-205ENST00000476494 MORC1Q86VD1 984 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms