RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 HELBQ8NG08 1087 aaPredicted RBP19.71■□□□□ 0.75
TVP23B-202ENST00000476139 SPATA31A1Q5TZJ5 1347 aa19.71■□□□□ 0.75
TVP23B-202ENST00000476139 HCLS1P14317 486 aaPredicted RBP19.71■□□□□ 0.75
TVP23B-202ENST00000476139 ATP6V1AP38606 617 aa19.71■□□□□ 0.75
TVP23B-202ENST00000476139 HAND2P61296 217 aa19.71■□□□□ 0.75
TVP23B-202ENST00000476139 APOBRQ0VD83 1088 aa19.71■□□□□ 0.75
TVP23B-202ENST00000476139 INTS5Q6P9B9 1019 aaKnown RBP19.71■□□□□ 0.75
TVP23B-202ENST00000476139 MARCH10Q8NA82 808 aaPredicted RBP19.71■□□□□ 0.75
TVP23B-202ENST00000476139 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.71■□□□□ 0.75
TVP23B-202ENST00000476139 RIC1Q4ADV7 1423 aa19.71■□□□□ 0.75
TVP23B-202ENST00000476139 SNAP23O00161 211 aa19.7■□□□□ 0.74
TVP23B-202ENST00000476139 EXOSC10Q01780 885 aaKnown RBP19.7■□□□□ 0.74
TVP23B-202ENST00000476139 ZNF34Q8IZ26 560 aa19.7■□□□□ 0.74
TVP23B-202ENST00000476139 TSPY26PQ9H489 355 aa19.7■□□□□ 0.74
TVP23B-202ENST00000476139 TFIP11Q9UBB9 837 aaKnown RBP19.7■□□□□ 0.74
TVP23B-202ENST00000476139 ERVV-1B6SEH8 477 aa19.7■□□□□ 0.74
TVP23B-202ENST00000476139 PDE8AO60658 829 aa19.7■□□□□ 0.74
TVP23B-202ENST00000476139 PDCP20941 246 aa19.7■□□□□ 0.74
TVP23B-202ENST00000476139 VGLL2Q8N8G2 317 aa19.7■□□□□ 0.74
TVP23B-202ENST00000476139 EIF5P55010 431 aaKnown RBP19.69■□□□□ 0.74
TVP23B-202ENST00000476139 SUSD4Q5VX71 490 aa19.69■□□□□ 0.74
TVP23B-202ENST00000476139 CRKLP46109 303 aaKnown RBP19.69■□□□□ 0.74
TVP23B-202ENST00000476139 CCT2P78371 535 aaKnown RBP19.69■□□□□ 0.74
TVP23B-202ENST00000476139 TTC6Q86TZ1 520 aa19.69■□□□□ 0.74
TVP23B-202ENST00000476139 LRP6O75581 1613 aa19.69■□□□□ 0.74
TVP23B-202ENST00000476139 PDE8BO95263 885 aa19.68■□□□□ 0.74
TVP23B-202ENST00000476139 FGAP02671 866 aa19.68■□□□□ 0.74
TVP23B-202ENST00000476139 HMGB1P09429 215 aaKnown RBP19.68■□□□□ 0.74
TVP23B-202ENST00000476139 PDLIM2Q96JY6 352 aa19.68■□□□□ 0.74
TVP23B-202ENST00000476139 NCOA5Q9HCD5 579 aaKnown RBP19.68■□□□□ 0.74
TVP23B-202ENST00000476139 GPHNQ9NQX3 736 aaPredicted RBP19.68■□□□□ 0.74
TVP23B-202ENST00000476139 NAP1L2Q9ULW6 460 aaPredicted RBP19.68■□□□□ 0.74
TVP23B-202ENST00000476139 ITPK1Q13572 414 aa19.68■□□□□ 0.74
TVP23B-202ENST00000476139 CCDC183Q5T5S1 534 aa19.68■□□□□ 0.74
TVP23B-202ENST00000476139 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.68■□□□□ 0.74
TVP23B-202ENST00000476139 KCNQ2O43526 872 aa19.67■□□□□ 0.74
TVP23B-202ENST00000476139 LOC102724428A0A0B4J2F2 783 aa19.67■□□□□ 0.74
TVP23B-202ENST00000476139 SIK1P57059 783 aa19.67■□□□□ 0.74
TVP23B-202ENST00000476139 CTDNEP1O95476 244 aa19.66■□□□□ 0.74
TVP23B-202ENST00000476139 PHKA1P46020 1223 aa19.66■□□□□ 0.74
TVP23B-202ENST00000476139 FOSBP53539 338 aa19.66■□□□□ 0.74
TVP23B-202ENST00000476139 GIMAP6Q6P9H5 292 aa19.66■□□□□ 0.74
TVP23B-202ENST00000476139 TICAM2Q86XR7 235 aa19.66■□□□□ 0.74
TVP23B-202ENST00000476139 SEC31BQ9NQW1 1179 aa19.66■□□□□ 0.74
TVP23B-202ENST00000476139 CCDC87Q9NVE4 849 aa19.66■□□□□ 0.74
TVP23B-202ENST00000476139 KRT85P78386 507 aa19.66■□□□□ 0.74
TVP23B-202ENST00000476139 SLIT2O94813 1529 aa19.66■□□□□ 0.74
TVP23B-202ENST00000476139 PFKFB2O60825 505 aa19.65■□□□□ 0.74
TVP23B-202ENST00000476139 PHF14O94880 888 aa19.65■□□□□ 0.74
TVP23B-202ENST00000476139 PIP4K2BP78356 416 aa19.65■□□□□ 0.74
TVP23B-202ENST00000476139 SLC9C2Q5TAH2 1124 aa19.65■□□□□ 0.74
TVP23B-202ENST00000476139 CCDC102BQ68D86 513 aa19.65■□□□□ 0.74
TVP23B-202ENST00000476139 APPBP2Q92624 585 aa19.65■□□□□ 0.74
TVP23B-202ENST00000476139 ZFYP08048 801 aaPredicted RBP19.65■□□□□ 0.74
TVP23B-202ENST00000476139 GPAA1O43292 621 aa19.65■□□□□ 0.74
TVP23B-202ENST00000476139 AGXT2Q9BYV1 514 aa19.65■□□□□ 0.74
TVP23B-202ENST00000476139 PIH1D3Q9NQM4 214 aaKnown RBP19.65■□□□□ 0.74
TVP23B-202ENST00000476139 IDH1O75874 414 aaKnown RBP19.64■□□□□ 0.73
TVP23B-202ENST00000476139 CSPP1Q1MSJ5 1256 aa19.64■□□□□ 0.73
TVP23B-202ENST00000476139 LRRFIP1Q32MZ4 808 aaKnown RBP19.64■□□□□ 0.73
TVP23B-202ENST00000476139 NSUN7Q8NE18 718 aaKnown RBP19.64■□□□□ 0.73
TVP23B-202ENST00000476139 NUP98P52948 1817 aa19.64■□□□□ 0.73
TVP23B-202ENST00000476139 PTMAP06454 111 aaKnown RBP19.64■□□□□ 0.73
TVP23B-202ENST00000476139 KCNQ4P56696 695 aa19.64■□□□□ 0.73
TVP23B-202ENST00000476139 PLCB2Q00722 1185 aa19.64■□□□□ 0.73
TVP23B-202ENST00000476139 AHDC1Q5TGY3 1603 aaPredicted RBP19.63■□□□□ 0.73
TVP23B-202ENST00000476139 PDIA3P30101 505 aaKnown RBP19.63■□□□□ 0.73
TVP23B-202ENST00000476139 FAM184AQ8NB25 1140 aa19.63■□□□□ 0.73
TVP23B-202ENST00000476139 CDCA7Q9BWT1 371 aaPredicted RBP19.63■□□□□ 0.73
TVP23B-202ENST00000476139 NOL7Q9UMY1 257 aaKnown RBP19.63■□□□□ 0.73
TVP23B-202ENST00000476139 THRAP3Q9Y2W1 955 aaKnown RBP19.63■□□□□ 0.73
TVP23B-202ENST00000476139 H3BQV1 296 aa19.63■□□□□ 0.73
TVP23B-202ENST00000476139 PDIA4P13667 645 aaKnown RBP19.63■□□□□ 0.73
TVP23B-202ENST00000476139 IFFO2Q5TF58 517 aa19.63■□□□□ 0.73
TVP23B-202ENST00000476139 SMARCC2Q8TAQ2 1214 aa19.63■□□□□ 0.73
TVP23B-202ENST00000476139 CAMTA2O94983 1202 aa19.62■□□□□ 0.73
TVP23B-202ENST00000476139 IMMTQ16891 758 aaKnown RBP19.62■□□□□ 0.73
TVP23B-202ENST00000476139 DENND2AQ9ULE3 1009 aa19.62■□□□□ 0.73
TVP23B-202ENST00000476139 DOT1LQ8TEK3 1739 aa19.62■□□□□ 0.73
TVP23B-202ENST00000476139 ZNF830Q96NB3 372 aaPredicted RBP19.62■□□□□ 0.73
TVP23B-202ENST00000476139 COL22A1Q8NFW1 1626 aaPredicted RBP19.62■□□□□ 0.73
TVP23B-202ENST00000476139 PTPDC1A2A3K4 754 aa19.62■□□□□ 0.73
TVP23B-202ENST00000476139 LIG1P18858 919 aa19.62■□□□□ 0.73
TVP23B-202ENST00000476139 ADD2P35612 726 aa19.62■□□□□ 0.73
TVP23B-202ENST00000476139 SPATA32Q96LK8 384 aa19.62■□□□□ 0.73
TVP23B-202ENST00000476139 UTP14AQ9BVJ6 771 aaKnown RBP19.62■□□□□ 0.73
TVP23B-202ENST00000476139 USP25Q9UHP3 1055 aa19.62■□□□□ 0.73
TVP23B-202ENST00000476139 CTNNA3Q9UI47 895 aa19.62■□□□□ 0.73
TVP23B-202ENST00000476139 SPATA31A5Q5VU36 1347 aa19.61■□□□□ 0.73
TVP23B-202ENST00000476139 SPATA31A7Q8IWB4 1347 aa19.61■□□□□ 0.73
TVP23B-202ENST00000476139 LAMA4Q16363 1823 aa19.61■□□□□ 0.73
TVP23B-202ENST00000476139 NKX2-3Q8TAU0 364 aa19.61■□□□□ 0.73
TVP23B-202ENST00000476139 R3HCC1Q9Y3T6 440 aaKnown RBP19.61■□□□□ 0.73
TVP23B-202ENST00000476139 CAMK4Q16566 473 aa19.61■□□□□ 0.73
TVP23B-202ENST00000476139 SMIM5Q71RC9 77 aa19.61■□□□□ 0.73
TVP23B-202ENST00000476139 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.61■□□□□ 0.73
TVP23B-202ENST00000476139 NIP7Q9Y221 180 aaKnown RBP eCLIP19.61■□□□□ 0.73
TVP23B-202ENST00000476139 CEBPZQ03701 1054 aaKnown RBP19.6■□□□□ 0.73
TVP23B-202ENST00000476139 RESTQ13127 1097 aa19.6■□□□□ 0.73
TVP23B-202ENST00000476139 PUM3Q15397 648 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms