RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 PDE6BP35913 854 aa14.85□□□□□ -0.03
MRPL55-227ENST00000475832 MFAP1P55081 439 aaKnown RBP14.85□□□□□ -0.03
MRPL55-227ENST00000475832 TIMM10P62072 90 aa14.85□□□□□ -0.03
MRPL55-227ENST00000475832 LRRFIP1Q32MZ4 808 aaKnown RBP14.85□□□□□ -0.03
MRPL55-227ENST00000475832 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.85□□□□□ -0.03
MRPL55-227ENST00000475832 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
MRPL55-227ENST00000475832 DDX60Q8IY21 1712 aaKnown RBP14.85□□□□□ -0.03
MRPL55-227ENST00000475832 GRAPQ13588 217 aa14.84□□□□□ -0.03
MRPL55-227ENST00000475832 ARHGAP27Q6ZUM4 889 aa14.84□□□□□ -0.03
MRPL55-227ENST00000475832 CCDC24Q8N4L8 307 aa14.84□□□□□ -0.03
MRPL55-227ENST00000475832 GRAPLQ8TC17 118 aaPredicted RBP14.84□□□□□ -0.03
MRPL55-227ENST00000475832 XAGE2Q96GT9 111 aa14.84□□□□□ -0.03
MRPL55-227ENST00000475832 BOLA2Q9H3K6 86 aa14.84□□□□□ -0.03
MRPL55-227ENST00000475832 DIAPH3Q9NSV4 1193 aa14.84□□□□□ -0.03
MRPL55-227ENST00000475832 H0YIN7 160 aa14.83□□□□□ -0.04
MRPL55-227ENST00000475832 MAP4K4O95819 1239 aaPredicted RBP14.83□□□□□ -0.04
MRPL55-227ENST00000475832 UQCRFS1P1P0C7P4 283 aa14.83□□□□□ -0.04
MRPL55-227ENST00000475832 KCNJ4P48050 445 aa14.83□□□□□ -0.04
MRPL55-227ENST00000475832 CHRNDQ07001 517 aa14.83□□□□□ -0.04
MRPL55-227ENST00000475832 DALRD3Q5D0E6 543 aaKnown RBP14.83□□□□□ -0.04
MRPL55-227ENST00000475832 C3orf67Q6ZVT6 689 aa14.83□□□□□ -0.04
MRPL55-227ENST00000475832 TMC4Q7Z404 712 aa14.83□□□□□ -0.04
MRPL55-227ENST00000475832 TICAM2Q86XR7 235 aa14.83□□□□□ -0.04
MRPL55-227ENST00000475832 C2CD5Q86YS7 1000 aa14.83□□□□□ -0.04
MRPL55-227ENST00000475832 TMX4Q9H1E5 349 aaPredicted RBP14.83□□□□□ -0.04
MRPL55-227ENST00000475832 BCS1LQ9Y276 419 aa14.83□□□□□ -0.04
MRPL55-227ENST00000475832 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.83□□□□□ -0.04
MRPL55-227ENST00000475832 ARFGEF1Q9Y6D6 1849 aa14.82□□□□□ -0.04
MRPL55-227ENST00000475832 SRGNP10124 158 aa14.82□□□□□ -0.04
MRPL55-227ENST00000475832 VGLL2Q8N8G2 317 aa14.82□□□□□ -0.04
MRPL55-227ENST00000475832 CELF1Q92879 486 aaKnown RBP14.82□□□□□ -0.04
MRPL55-227ENST00000475832 DNAJC2Q99543 621 aaKnown RBP14.82□□□□□ -0.04
MRPL55-227ENST00000475832 HAUS7Q99871 368 aa14.82□□□□□ -0.04
MRPL55-227ENST00000475832 FSD1Q9BTV5 496 aa14.82□□□□□ -0.04
MRPL55-227ENST00000475832 COL11A2P13942 1736 aaPredicted RBP14.81□□□□□ -0.04
MRPL55-227ENST00000475832 BBOX1O75936 387 aa14.81□□□□□ -0.04
MRPL55-227ENST00000475832 CHMLP26374 656 aa14.81□□□□□ -0.04
MRPL55-227ENST00000475832 UBE4AQ14139 1066 aa14.81□□□□□ -0.04
MRPL55-227ENST00000475832 CRY2Q49AN0 593 aa14.81□□□□□ -0.04
MRPL55-227ENST00000475832 TTLL6Q8N841 843 aa14.81□□□□□ -0.04
MRPL55-227ENST00000475832 SMC1BQ8NDV3 1235 aa14.81□□□□□ -0.04
MRPL55-227ENST00000475832 HELBQ8NG08 1087 aaPredicted RBP14.81□□□□□ -0.04
MRPL55-227ENST00000475832 ZNF512BQ96KM6 892 aaPredicted RBP14.81□□□□□ -0.04
MRPL55-227ENST00000475832 CRAMP1Q96RY5 1269 aa14.81□□□□□ -0.04
MRPL55-227ENST00000475832 GNL3LQ9NVN8 582 aaKnown RBP14.81□□□□□ -0.04
MRPL55-227ENST00000475832 MINPP1Q9UNW1 487 aa14.81□□□□□ -0.04
MRPL55-227ENST00000475832 FGFR2P21802 821 aa14.8□□□□□ -0.04
MRPL55-227ENST00000475832 CAVIN4Q5BKX8 364 aa14.8□□□□□ -0.04
MRPL55-227ENST00000475832 STYK1Q6J9G0 422 aa14.8□□□□□ -0.04
MRPL55-227ENST00000475832 KIAA1211Q6ZU35 1233 aa14.8□□□□□ -0.04
MRPL55-227ENST00000475832 DDRGK1Q96HY6 314 aa14.8□□□□□ -0.04
MRPL55-227ENST00000475832 C22orf23Q9BZE7 217 aa14.8□□□□□ -0.04
MRPL55-227ENST00000475832 PAG1Q9NWQ8 432 aa14.8□□□□□ -0.04
MRPL55-227ENST00000475832 TAF5LO75529 589 aa14.79□□□□□ -0.04
MRPL55-227ENST00000475832 SEC24BO95487 1268 aa14.79□□□□□ -0.04
MRPL55-227ENST00000475832 NPR1P16066 1061 aa14.79□□□□□ -0.04
MRPL55-227ENST00000475832 MCCP23508 829 aa14.79□□□□□ -0.04
MRPL55-227ENST00000475832 ADORA1P30542 326 aa14.79□□□□□ -0.04
MRPL55-227ENST00000475832 ALDH1B1P30837 517 aa14.79□□□□□ -0.04
MRPL55-227ENST00000475832 HOXA10P31260 410 aaPredicted RBP14.79□□□□□ -0.04
MRPL55-227ENST00000475832 TTF1Q15361 905 aaPredicted RBP14.79□□□□□ -0.04
MRPL55-227ENST00000475832 RFX7Q2KHR2 1363 aa14.79□□□□□ -0.04
MRPL55-227ENST00000475832 VPS37DQ86XT2 251 aa14.79□□□□□ -0.04
MRPL55-227ENST00000475832 MASTLQ96GX5 879 aa14.79□□□□□ -0.04
MRPL55-227ENST00000475832 ESYT1Q9BSJ8 1104 aa14.79□□□□□ -0.04
MRPL55-227ENST00000475832 RRAGCQ9HB90 399 aa14.79□□□□□ -0.04
MRPL55-227ENST00000475832 EPB41L2O43491 1005 aaKnown RBP14.78□□□□□ -0.04
MRPL55-227ENST00000475832 FKBP4Q02790 459 aaKnown RBP eCLIP14.78□□□□□ -0.04
MRPL55-227ENST00000475832 C9orf131Q5VYM1 1079 aa14.78□□□□□ -0.04
MRPL55-227ENST00000475832 TBC1D32Q96NH3 1257 aa14.78□□□□□ -0.04
MRPL55-227ENST00000475832 ANKIB1Q9P2G1 1089 aa14.78□□□□□ -0.04
MRPL55-227ENST00000475832 TNRC6CQ9HCJ0 1690 aaKnown RBP14.77□□□□□ -0.04
MRPL55-227ENST00000475832 RAD50Q92878 1312 aa14.77□□□□□ -0.04
MRPL55-227ENST00000475832 GOLIM4O00461 696 aa14.77□□□□□ -0.05
MRPL55-227ENST00000475832 CCDC102BQ68D86 513 aa14.77□□□□□ -0.05
MRPL55-227ENST00000475832 ZSCAN25Q6NSZ9 544 aa14.77□□□□□ -0.05
MRPL55-227ENST00000475832 KBTBD3Q8NAB2 608 aa14.77□□□□□ -0.05
MRPL55-227ENST00000475832 CNKSR1Q969H4 720 aa14.77□□□□□ -0.05
MRPL55-227ENST00000475832 ZNF622Q969S3 477 aaKnown RBP eCLIP14.77□□□□□ -0.05
MRPL55-227ENST00000475832 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.77□□□□□ -0.05
MRPL55-227ENST00000475832 LEMD3Q9Y2U8 911 aa14.77□□□□□ -0.05
MRPL55-227ENST00000475832 XDHP47989 1333 aa14.76□□□□□ -0.05
MRPL55-227ENST00000475832 ZFYP08048 801 aaPredicted RBP14.76□□□□□ -0.05
MRPL55-227ENST00000475832 ARID4AP29374 1257 aaPredicted RBP14.76□□□□□ -0.05
MRPL55-227ENST00000475832 DAXXQ9UER7 740 aaPredicted RBP14.76□□□□□ -0.05
MRPL55-227ENST00000475832 ZNF804BA4D1E1 1349 aa14.75□□□□□ -0.05
MRPL55-227ENST00000475832 PPEF1O14829 653 aaPredicted RBP14.75□□□□□ -0.05
MRPL55-227ENST00000475832 PRPF40BQ6NWY9 871 aaKnown RBP14.75□□□□□ -0.05
MRPL55-227ENST00000475832 CWC27Q6UX04 472 aaKnown RBP14.75□□□□□ -0.05
MRPL55-227ENST00000475832 C7orf43Q8WVR3 580 aa14.75□□□□□ -0.05
MRPL55-227ENST00000475832 ANO2Q9NQ90 1003 aa14.75□□□□□ -0.05
MRPL55-227ENST00000475832 SEMA3EO15041 775 aa14.74□□□□□ -0.05
MRPL55-227ENST00000475832 SGSM2O43147 1006 aa14.74□□□□□ -0.05
MRPL55-227ENST00000475832 FRAT2O75474 233 aaPredicted RBP14.74□□□□□ -0.05
MRPL55-227ENST00000475832 ATP2B4P23634 1241 aa14.74□□□□□ -0.05
MRPL55-227ENST00000475832 PHKA1P46020 1223 aa14.74□□□□□ -0.05
MRPL55-227ENST00000475832 RBM25P49756 843 aaKnown RBP14.74□□□□□ -0.05
MRPL55-227ENST00000475832 SLX4Q8IY92 1834 aa14.73□□□□□ -0.05
MRPL55-227ENST00000475832 ZAP70P43403 619 aa14.73□□□□□ -0.05
MRPL55-227ENST00000475832 SP8Q8IXZ3 490 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms