RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 PUS7Q96PZ0 661 aaKnown RBP13.15□□□□□ -0.3
U2AF1-209ENST00000475639 TSG101Q99816 390 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 GLI2P10070 1586 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 NEURL4Q96JN8 1562 aa13.15□□□□□ -0.3
U2AF1-209ENST00000475639 TDO2P48775 406 aa13.15□□□□□ -0.31
U2AF1-209ENST00000475639 E4F1Q66K89 784 aaPredicted RBP13.15□□□□□ -0.31
U2AF1-209ENST00000475639 PPP4R3AQ6IN85 833 aa13.15□□□□□ -0.31
U2AF1-209ENST00000475639 CEP126Q9P2H0 1117 aa13.15□□□□□ -0.31
U2AF1-209ENST00000475639 NRXN1Q9ULB1 1477 aa13.15□□□□□ -0.31
U2AF1-209ENST00000475639 A0A1B0GUL7 405 aa13.14□□□□□ -0.31
U2AF1-209ENST00000475639 KCNG1Q9UIX4 513 aa13.14□□□□□ -0.31
U2AF1-209ENST00000475639 VWDEQ8N2E2 1590 aa13.14□□□□□ -0.31
U2AF1-209ENST00000475639 KIAA0232Q92628 1395 aa13.14□□□□□ -0.31
U2AF1-209ENST00000475639 TTC21BQ7Z4L5 1316 aa13.14□□□□□ -0.31
U2AF1-209ENST00000475639 IQCB1Q15051 598 aa13.14□□□□□ -0.31
U2AF1-209ENST00000475639 RAB34Q9BZG1 259 aa13.14□□□□□ -0.31
U2AF1-209ENST00000475639 CLSTN2Q9H4D0 955 aa13.14□□□□□ -0.31
U2AF1-209ENST00000475639 SSX2IPQ9Y2D8 614 aa13.14□□□□□ -0.31
U2AF1-209ENST00000475639 SNX14Q9Y5W7 946 aa13.14□□□□□ -0.31
U2AF1-209ENST00000475639 KIF4AO95239 1232 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 NLRP6P59044 892 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 CEP112Q8N8E3 955 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 IQUBQ8NA54 791 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 SERPINA10Q9UK55 444 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 IKBKGQ9Y6K9 419 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 SETBP1Q9Y6X0 1596 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 DDX12PQ92771 950 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 PPP1R13BQ96KQ4 1090 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 CPA1P15085 419 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 TTC31Q49AM3 519 aaPredicted RBP13.13□□□□□ -0.31
U2AF1-209ENST00000475639 RASEFQ8IZ41 740 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 SCAND2PQ9GZW5 306 aaPredicted RBP13.13□□□□□ -0.31
U2AF1-209ENST00000475639 ADAM21Q9UKJ8 722 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 PNPLA6Q8IY17 1366 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 LMAN1P49257 510 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 NFE2L2Q16236 605 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 PLEKHO1Q53GL0 409 aaPredicted RBP13.13□□□□□ -0.31
U2AF1-209ENST00000475639 KLHL10Q6JEL2 608 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
U2AF1-209ENST00000475639 NR1I2O75469 434 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 ZWINTO95229 277 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 YEATS4O95619 227 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 DNA2P51530 1060 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 DDX46Q7L014 1031 aaKnown RBP13.12□□□□□ -0.31
U2AF1-209ENST00000475639 SCLT1Q96NL6 688 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 PDRG1Q9NUG6 133 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 DDX19AQ9NUU7 478 aaKnown RBP13.12□□□□□ -0.31
U2AF1-209ENST00000475639 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 TTC21AQ8NDW8 1320 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 ATP8B1O43520 1251 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 WDHD1O75717 1129 aaPredicted RBP13.12□□□□□ -0.31
U2AF1-209ENST00000475639 USP5P45974 858 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 SREK1Q8WXA9 508 aaKnown RBP13.12□□□□□ -0.31
U2AF1-209ENST00000475639 TMCO5BA8MYB1 307 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 TMEM132EQ6IEE7 984 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 EXOC4Q96A65 974 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 TMOD2Q9NZR1 351 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 TULP4Q9NRJ4 1543 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 MAGEA9P43362 315 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 C11orf57Q6ZUT1 292 aaPredicted RBP13.12□□□□□ -0.31
U2AF1-209ENST00000475639 JAKMIP1Q96N16 626 aaKnown RBP13.12□□□□□ -0.31
U2AF1-209ENST00000475639 EPC1Q9H2F5 836 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 ZNF287Q9HBT7 754 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 PSD3Q9NYI0 1048 aa13.12□□□□□ -0.31
U2AF1-209ENST00000475639 CCT4P50991 539 aaKnown RBP13.11□□□□□ -0.31
U2AF1-209ENST00000475639 RBM5P52756 815 aaKnown RBP eCLIP13.11□□□□□ -0.31
U2AF1-209ENST00000475639 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 CCDC150Q8NCX0 1101 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 ALS2CR12Q96Q35 445 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 CCDC160A6NGH7 325 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 ATF3P18847 181 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 MROH2AA6NES4 1674 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 TET3O43151 1660 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 CCDC196A0A1B0GTZ2 297 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 GOLGA6L9A6NEM1 432 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 CC2D1AQ6P1N0 951 aaPredicted RBP13.11□□□□□ -0.31
U2AF1-209ENST00000475639 PSMD1Q99460 953 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 CABP2Q9NPB3 220 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 CEP83Q9Y592 693 aa13.11□□□□□ -0.31
U2AF1-209ENST00000475639 TADA3O75528 432 aa13.1□□□□□ -0.31
U2AF1-209ENST00000475639 CDC37L1Q7L3B6 337 aa13.1□□□□□ -0.31
U2AF1-209ENST00000475639 PLVAPQ9BX97 442 aa13.1□□□□□ -0.31
U2AF1-209ENST00000475639 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
U2AF1-209ENST00000475639 FKBP4Q02790 459 aaKnown RBP eCLIP13.1□□□□□ -0.31
U2AF1-209ENST00000475639 MAATS1Q7Z4T9 603 aa13.1□□□□□ -0.31
U2AF1-209ENST00000475639 FAM114A1Q8IWE2 563 aa13.1□□□□□ -0.31
U2AF1-209ENST00000475639 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
U2AF1-209ENST00000475639 CCDC96Q2M329 555 aa13.1□□□□□ -0.31
U2AF1-209ENST00000475639 YTHDC2Q9H6S0 1430 aaKnown RBP13.1□□□□□ -0.31
U2AF1-209ENST00000475639 FOXR1Q6PIV2 292 aa13.1□□□□□ -0.31
U2AF1-209ENST00000475639 PHAXQ9H814 394 aaKnown RBP13.1□□□□□ -0.31
U2AF1-209ENST00000475639 E2F4Q16254 413 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 CCDC155Q8N6L0 562 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 ZNF622Q969S3 477 aaKnown RBP eCLIP13.09□□□□□ -0.31
U2AF1-209ENST00000475639 SMC6Q96SB8 1091 aa13.09□□□□□ -0.31
U2AF1-209ENST00000475639 NAP1L3Q99457 506 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms