RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SMC4Q9NTJ3 1288 aa19.64■□□□□ 0.73
CPSF3-203ENST00000475482 ZNF804BA4D1E1 1349 aa19.64■□□□□ 0.73
CPSF3-203ENST00000475482 IRS2Q9Y4H2 1338 aa19.64■□□□□ 0.73
CPSF3-203ENST00000475482 KIF16BQ96L93 1317 aa19.63■□□□□ 0.73
CPSF3-203ENST00000475482 G3V3G9 751 aa19.63■□□□□ 0.73
CPSF3-203ENST00000475482 TRAF5O00463 557 aa19.63■□□□□ 0.73
CPSF3-203ENST00000475482 BCAR3O75815 825 aa19.63■□□□□ 0.73
CPSF3-203ENST00000475482 NBPF7P0C2Y1 421 aaPredicted RBP19.63■□□□□ 0.73
CPSF3-203ENST00000475482 ZNF280AP59817 542 aaPredicted RBP19.63■□□□□ 0.73
CPSF3-203ENST00000475482 DCAF8Q5TAQ9 597 aa19.63■□□□□ 0.73
CPSF3-203ENST00000475482 COA1Q9GZY4 146 aa19.63■□□□□ 0.73
CPSF3-203ENST00000475482 USP17L3A6NCW0 530 aa19.62■□□□□ 0.73
CPSF3-203ENST00000475482 USP17L4A6NCW7 530 aa19.62■□□□□ 0.73
CPSF3-203ENST00000475482 IPO8O15397 1037 aaKnown RBP19.62■□□□□ 0.73
CPSF3-203ENST00000475482 C15orf52Q6ZUT6 534 aaKnown RBP19.62■□□□□ 0.73
CPSF3-203ENST00000475482 USP17L1Q7RTZ2 530 aa19.62■□□□□ 0.73
CPSF3-203ENST00000475482 SUCLG2Q96I99 432 aa19.62■□□□□ 0.73
CPSF3-203ENST00000475482 KLRK1P26718 216 aa19.61■□□□□ 0.73
CPSF3-203ENST00000475482 IRX6P78412 446 aaPredicted RBP19.61■□□□□ 0.73
CPSF3-203ENST00000475482 RABL6Q3YEC7 729 aaPredicted RBP19.61■□□□□ 0.73
CPSF3-203ENST00000475482 CDC37L1Q7L3B6 337 aa19.61■□□□□ 0.73
CPSF3-203ENST00000475482 GLIS2Q9BZE0 524 aaPredicted RBP19.61■□□□□ 0.73
CPSF3-203ENST00000475482 VEGFBP49765 207 aa19.6■□□□□ 0.73
CPSF3-203ENST00000475482 PDE3AQ14432 1141 aa19.6■□□□□ 0.73
CPSF3-203ENST00000475482 CCDC57Q2TAC2 916 aa19.6■□□□□ 0.73
CPSF3-203ENST00000475482 TBC1D10BQ4KMP7 808 aaPredicted RBP19.6■□□□□ 0.73
CPSF3-203ENST00000475482 DEFB115Q30KQ5 88 aa19.59■□□□□ 0.73
CPSF3-203ENST00000475482 DACT2Q5SW24 774 aa19.59■□□□□ 0.73
CPSF3-203ENST00000475482 STRIP1Q5VSL9 837 aa19.59■□□□□ 0.73
CPSF3-203ENST00000475482 ZKSCAN2Q63HK3 967 aa19.59■□□□□ 0.73
CPSF3-203ENST00000475482 FRAT1Q92837 279 aaPredicted RBP19.59■□□□□ 0.73
CPSF3-203ENST00000475482 ZNF594Q96JF6 807 aaPredicted RBP19.59■□□□□ 0.73
CPSF3-203ENST00000475482 USP44Q9H0E7 712 aa19.59■□□□□ 0.73
CPSF3-203ENST00000475482 PLIN1O60240 522 aa19.58■□□□□ 0.72
CPSF3-203ENST00000475482 KIF4BQ2VIQ3 1234 aa19.58■□□□□ 0.72
CPSF3-203ENST00000475482 CHMP3Q9Y3E7 222 aa19.58■□□□□ 0.72
CPSF3-203ENST00000475482 TLL2Q9Y6L7 1015 aa19.58■□□□□ 0.72
CPSF3-203ENST00000475482 SNAP23O00161 211 aa19.57■□□□□ 0.72
CPSF3-203ENST00000475482 TAF5LO75529 589 aa19.57■□□□□ 0.72
CPSF3-203ENST00000475482 USP17L8P0C7I0 530 aa19.57■□□□□ 0.72
CPSF3-203ENST00000475482 HSPA1AP0DMV8 641 aaKnown RBP19.57■□□□□ 0.72
CPSF3-203ENST00000475482 HSPA1BP0DMV9 641 aaKnown RBP19.57■□□□□ 0.72
CPSF3-203ENST00000475482 LDHAL6AQ6ZMR3 332 aa19.57■□□□□ 0.72
CPSF3-203ENST00000475482 ANKRD44Q8N8A2 993 aa19.57■□□□□ 0.72
CPSF3-203ENST00000475482 MYO3BQ8WXR4 1341 aa19.56■□□□□ 0.72
CPSF3-203ENST00000475482 THSD7BQ9C0I4 1608 aa19.56■□□□□ 0.72
CPSF3-203ENST00000475482 RBM26Q5T8P6 1007 aaKnown RBP19.56■□□□□ 0.72
CPSF3-203ENST00000475482 SAPCD2Q86UD0 394 aa19.56■□□□□ 0.72
CPSF3-203ENST00000475482 HELBQ8NG08 1087 aaPredicted RBP19.56■□□□□ 0.72
CPSF3-203ENST00000475482 BICC1Q9H694 974 aaKnown RBP19.56■□□□□ 0.72
CPSF3-203ENST00000475482 CD209Q9NNX6 404 aa19.56■□□□□ 0.72
CPSF3-203ENST00000475482 PPP4R2Q9NY27 417 aa19.56■□□□□ 0.72
CPSF3-203ENST00000475482 ABT1Q9ULW3 272 aaKnown RBP19.56■□□□□ 0.72
CPSF3-203ENST00000475482 CELF2O95319 508 aaKnown RBP19.55■□□□□ 0.72
CPSF3-203ENST00000475482 KCNJ4P48050 445 aa19.55■□□□□ 0.72
CPSF3-203ENST00000475482 MMP14P50281 582 aa19.55■□□□□ 0.72
CPSF3-203ENST00000475482 USP48Q86UV5 1035 aa19.55■□□□□ 0.72
CPSF3-203ENST00000475482 ARHGAP45Q92619 1136 aa19.55■□□□□ 0.72
CPSF3-203ENST00000475482 HHIPL1Q96JK4 782 aa19.55■□□□□ 0.72
CPSF3-203ENST00000475482 RIPOR2Q9Y4F9 1068 aa19.55■□□□□ 0.72
CPSF3-203ENST00000475482 WDR33Q9C0J8 1336 aaKnown RBP19.54■□□□□ 0.72
CPSF3-203ENST00000475482 IL1R1P14778 569 aa19.54■□□□□ 0.72
CPSF3-203ENST00000475482 TTLL5Q6EMB2 1281 aa19.54■□□□□ 0.72
CPSF3-203ENST00000475482 KRT26Q7Z3Y9 468 aa19.54■□□□□ 0.72
CPSF3-203ENST00000475482 DCPSQ96C86 337 aaKnown RBP19.54■□□□□ 0.72
CPSF3-203ENST00000475482 MXD3Q9BW11 206 aa19.54■□□□□ 0.72
CPSF3-203ENST00000475482 PUS3Q9BZE2 481 aaKnown RBP19.54■□□□□ 0.72
CPSF3-203ENST00000475482 MYOZ2Q9NPC6 264 aa19.54■□□□□ 0.72
CPSF3-203ENST00000475482 CNNM1Q9NRU3 951 aa19.54■□□□□ 0.72
CPSF3-203ENST00000475482 NOB1Q9ULX3 412 aaKnown RBP19.54■□□□□ 0.72
CPSF3-203ENST00000475482 ASTN2O75129 1339 aaPredicted RBP19.53■□□□□ 0.72
CPSF3-203ENST00000475482 SCARF1Q14162 830 aa19.53■□□□□ 0.72
CPSF3-203ENST00000475482 TAF7LQ5H9L4 462 aa19.53■□□□□ 0.72
CPSF3-203ENST00000475482 DLK2Q6UY11 383 aa19.53■□□□□ 0.72
CPSF3-203ENST00000475482 ATF7IPQ6VMQ6 1270 aa19.53■□□□□ 0.72
CPSF3-203ENST00000475482 FTSJ3Q8IY81 847 aaKnown RBP19.53■□□□□ 0.72
CPSF3-203ENST00000475482 AAMPQ13685 434 aa19.52■□□□□ 0.72
CPSF3-203ENST00000475482 UBE4AQ14139 1066 aa19.52■□□□□ 0.72
CPSF3-203ENST00000475482 CAPNS2Q96L46 248 aa19.52■□□□□ 0.72
CPSF3-203ENST00000475482 WBP1LQ9NX94 342 aa19.52■□□□□ 0.72
CPSF3-203ENST00000475482 GGA3Q9NZ52 723 aa19.52■□□□□ 0.72
CPSF3-203ENST00000475482 PITPNM2Q9BZ72 1349 aa19.51■□□□□ 0.71
CPSF3-203ENST00000475482 GTF2IP78347 998 aa19.51■□□□□ 0.71
CPSF3-203ENST00000475482 DZIP1LQ8IYY4 767 aaKnown RBP19.51■□□□□ 0.71
CPSF3-203ENST00000475482 API5Q9BZZ5 524 aaKnown RBP19.51■□□□□ 0.71
CPSF3-203ENST00000475482 MROH5Q6ZUA9 1318 aa19.51■□□□□ 0.71
CPSF3-203ENST00000475482 ADM5C9JUS6 153 aa19.5■□□□□ 0.71
CPSF3-203ENST00000475482 ECE1P42892 770 aa19.5■□□□□ 0.71
CPSF3-203ENST00000475482 RFX5P48382 616 aaPredicted RBP19.5■□□□□ 0.71
CPSF3-203ENST00000475482 ZNF804AQ7Z570 1209 aa19.5■□□□□ 0.71
CPSF3-203ENST00000475482 VGLL2Q8N8G2 317 aa19.5■□□□□ 0.71
CPSF3-203ENST00000475482 ZBED3Q96IU2 234 aaPredicted RBP19.5■□□□□ 0.71
CPSF3-203ENST00000475482 WNT10BO00744 389 aa19.49■□□□□ 0.71
CPSF3-203ENST00000475482 FKBP1AP62942 108 aaKnown RBP19.49■□□□□ 0.71
CPSF3-203ENST00000475482 LRRC24Q50LG9 513 aa19.49■□□□□ 0.71
CPSF3-203ENST00000475482 COL13A1Q5TAT6 717 aaPredicted RBP19.49■□□□□ 0.71
CPSF3-203ENST00000475482 IFFO2Q5TF58 517 aa19.49■□□□□ 0.71
CPSF3-203ENST00000475482 ANGEL2Q5VTE6 544 aaKnown RBP19.49■□□□□ 0.71
CPSF3-203ENST00000475482 CYP4F22Q6NT55 531 aa19.49■□□□□ 0.71
CPSF3-203ENST00000475482 SULF1Q8IWU6 871 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms