RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 SLC5A1P13866 664 aa21.88■■□□□ 1.09
SEC61A2-213ENST00000475268 COL9A3Q14050 684 aaPredicted RBP21.88■■□□□ 1.09
SEC61A2-213ENST00000475268 C3orf67Q6ZVT6 689 aa21.88■■□□□ 1.09
SEC61A2-213ENST00000475268 ARHGEF1Q92888 912 aaKnown RBP21.88■■□□□ 1.09
SEC61A2-213ENST00000475268 LY75O60449 1722 aa21.88■■□□□ 1.09
SEC61A2-213ENST00000475268 M0R2C6 588 aa21.88■■□□□ 1.09
SEC61A2-213ENST00000475268 ZFYP08048 801 aaPredicted RBP21.88■■□□□ 1.09
SEC61A2-213ENST00000475268 WASHC4Q2M389 1173 aa21.88■■□□□ 1.09
SEC61A2-213ENST00000475268 OSBP2Q969R2 916 aa21.88■■□□□ 1.09
SEC61A2-213ENST00000475268 PHF14O94880 888 aa21.87■■□□□ 1.09
SEC61A2-213ENST00000475268 CDC5LQ99459 802 aaKnown RBP21.87■■□□□ 1.09
SEC61A2-213ENST00000475268 ZDHHC9Q9Y397 364 aa21.87■■□□□ 1.09
SEC61A2-213ENST00000475268 CYP21A2P08686 494 aa21.87■■□□□ 1.09
SEC61A2-213ENST00000475268 KRT32Q14532 448 aa21.87■■□□□ 1.09
SEC61A2-213ENST00000475268 DSCC1Q9BVC3 393 aa21.87■■□□□ 1.09
SEC61A2-213ENST00000475268 TRAK2O60296 914 aa21.86■■□□□ 1.09
SEC61A2-213ENST00000475268 BAG4O95429 457 aaKnown RBP21.86■■□□□ 1.09
SEC61A2-213ENST00000475268 UQCRFS1P1P0C7P4 283 aa21.86■■□□□ 1.09
SEC61A2-213ENST00000475268 HSPD1P10809 573 aaKnown RBP21.86■■□□□ 1.09
SEC61A2-213ENST00000475268 RPS6KB1P23443 525 aa21.86■■□□□ 1.09
SEC61A2-213ENST00000475268 ARID4AP29374 1257 aaPredicted RBP21.86■■□□□ 1.09
SEC61A2-213ENST00000475268 SF3B3Q15393 1217 aaKnown RBP21.86■■□□□ 1.09
SEC61A2-213ENST00000475268 CLEC17AQ6ZS10 378 aa21.86■■□□□ 1.09
SEC61A2-213ENST00000475268 NBPF5PQ86XG9 351 aaPredicted RBP21.86■■□□□ 1.09
SEC61A2-213ENST00000475268 NYXQ9GZU5 481 aa21.86■■□□□ 1.09
SEC61A2-213ENST00000475268 CHRNDQ07001 517 aa21.85■■□□□ 1.09
SEC61A2-213ENST00000475268 TCEANC2Q96MN5 208 aa21.85■■□□□ 1.09
SEC61A2-213ENST00000475268 TAF1LQ8IZX4 1826 aa21.85■■□□□ 1.09
SEC61A2-213ENST00000475268 LARGE1O95461 756 aa21.85■■□□□ 1.09
SEC61A2-213ENST00000475268 TTF1Q15361 905 aaPredicted RBP21.85■■□□□ 1.09
SEC61A2-213ENST00000475268 FAM196AQ6ZSG2 479 aa21.85■■□□□ 1.09
SEC61A2-213ENST00000475268 ANKRD18AQ8IVF6 992 aa21.85■■□□□ 1.09
SEC61A2-213ENST00000475268 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.85■■□□□ 1.09
SEC61A2-213ENST00000475268 RFC4P35249 363 aa21.84■■□□□ 1.09
SEC61A2-213ENST00000475268 SLC10A5Q5PT55 438 aa21.84■■□□□ 1.09
SEC61A2-213ENST00000475268 TRAPPC3LQ5T215 181 aa21.84■■□□□ 1.09
SEC61A2-213ENST00000475268 ZSCAN31Q96LW9 406 aaPredicted RBP21.84■■□□□ 1.09
SEC61A2-213ENST00000475268 LRRC4BQ9NT99 713 aa21.84■■□□□ 1.09
SEC61A2-213ENST00000475268 AKAP11Q9UKA4 1901 aa21.84■■□□□ 1.09
SEC61A2-213ENST00000475268 C4BP0C0L5 1744 aa21.84■■□□□ 1.09
SEC61A2-213ENST00000475268 FOXD4L5Q5VV16 416 aaPredicted RBP21.84■■□□□ 1.09
SEC61A2-213ENST00000475268 FOXD4L4Q8WXT5 416 aaPredicted RBP21.84■■□□□ 1.09
SEC61A2-213ENST00000475268 APPBP2Q92624 585 aa21.84■■□□□ 1.09
SEC61A2-213ENST00000475268 NEK1Q96PY6 1258 aa21.84■■□□□ 1.09
SEC61A2-213ENST00000475268 COL4A1P02462 1669 aa21.83■■□□□ 1.09
SEC61A2-213ENST00000475268 PIH1D3Q9NQM4 214 aaKnown RBP21.83■■□□□ 1.09
SEC61A2-213ENST00000475268 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.83■■□□□ 1.09
SEC61A2-213ENST00000475268 GOLGA6L22H0YM25 854 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 IDH1O75874 414 aaKnown RBP21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 ZSCAN25Q6NSZ9 544 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 CCDC24Q8N4L8 307 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 PUS7LQ9H0K6 701 aaKnown RBP21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 SH2B1Q9NRF2 756 aaPredicted RBP21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 TPCN1Q9ULQ1 816 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 ARAP2Q8WZ64 1704 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 ANKRD1Q15327 319 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 ME3Q16798 604 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 SLC9C2Q5TAH2 1124 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 TPTE2Q6XPS3 522 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 KRT27Q7Z3Y8 459 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 CCDC83Q8IWF9 413 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 SPATA5Q8NB90 893 aa21.82■■□□□ 1.08
SEC61A2-213ENST00000475268 NLRP3Q96P20 1036 aa21.81■■□□□ 1.08
SEC61A2-213ENST00000475268 BRD1O95696 1058 aa21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 PTMSP20962 102 aa21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 ADD2P35612 726 aa21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 BCAMP50895 628 aa21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 RASGRF1Q13972 1273 aa21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 MCTP1Q6DN14 999 aa21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 ALDH8A1Q9H2A2 487 aaPredicted RBP21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 BSDC1Q9NW68 430 aaPredicted RBP21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 SMC3Q9UQE7 1217 aa21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 NPHP1O15259 732 aa21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 STOX1Q6ZVD7 989 aa21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 CELF1Q92879 486 aaKnown RBP21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 GZF1Q9H116 711 aaPredicted RBP21.8■■□□□ 1.08
SEC61A2-213ENST00000475268 A0A0G2JLW4 131 aa21.79■■□□□ 1.08
SEC61A2-213ENST00000475268 TRIM37O94972 964 aa21.79■■□□□ 1.08
SEC61A2-213ENST00000475268 TOB2Q14106 344 aaPredicted RBP21.79■■□□□ 1.08
SEC61A2-213ENST00000475268 NECAB1Q8N987 351 aa21.79■■□□□ 1.08
SEC61A2-213ENST00000475268 COL24A1Q17RW2 1714 aa21.79■■□□□ 1.08
SEC61A2-213ENST00000475268 GPAA1O43292 621 aa21.78■■□□□ 1.08
SEC61A2-213ENST00000475268 TTLL5Q6EMB2 1281 aa21.78■■□□□ 1.08
SEC61A2-213ENST00000475268 EP400Q96L91 3159 aa21.78■■□□□ 1.08
SEC61A2-213ENST00000475268 TAF1P21675 1872 aa21.78■■□□□ 1.08
SEC61A2-213ENST00000475268 MYH7P12883 1935 aa21.78■■□□□ 1.08
SEC61A2-213ENST00000475268 CASZ1Q86V15 1759 aa21.77■■□□□ 1.08
SEC61A2-213ENST00000475268 C4AP0C0L4 1744 aa21.77■■□□□ 1.08
SEC61A2-213ENST00000475268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.77■■□□□ 1.08
SEC61A2-213ENST00000475268 WWC3Q9ULE0 1092 aa21.77■■□□□ 1.08
SEC61A2-213ENST00000475268 MINPP1Q9UNW1 487 aa21.77■■□□□ 1.08
SEC61A2-213ENST00000475268 ZNF532Q9HCE3 1301 aa21.77■■□□□ 1.08
SEC61A2-213ENST00000475268 FOXP2O15409 715 aa21.77■■□□□ 1.07
SEC61A2-213ENST00000475268 PDE6AP16499 860 aa21.77■■□□□ 1.07
SEC61A2-213ENST00000475268 ST3GAL1Q11201 340 aa21.77■■□□□ 1.07
SEC61A2-213ENST00000475268 UBE3CQ15386 1083 aa21.77■■□□□ 1.07
SEC61A2-213ENST00000475268 CTNNA3Q9UI47 895 aa21.77■■□□□ 1.07
SEC61A2-213ENST00000475268 E7EWF7 191 aa21.76■■□□□ 1.07
SEC61A2-213ENST00000475268 DTNBO60941 627 aa21.76■■□□□ 1.07
SEC61A2-213ENST00000475268 HMGB1P09429 215 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms