RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 WWC1Q8IX03 1113 aa31.94■■■□□ 2.7
TMEM54-205ENST00000475208 CCT4P50991 539 aaKnown RBP31.93■■■□□ 2.7
TMEM54-205ENST00000475208 PITPNM2Q9BZ72 1349 aa31.93■■■□□ 2.7
TMEM54-205ENST00000475208 SLC4A2P04920 1241 aa31.92■■■□□ 2.7
TMEM54-205ENST00000475208 PAPPA2Q9BXP8 1791 aa31.91■■■□□ 2.7
TMEM54-205ENST00000475208 H7C1W4 665 aa31.91■■■□□ 2.7
TMEM54-205ENST00000475208 IGHMBP2P38935 993 aaKnown RBP31.9■■■□□ 2.7
TMEM54-205ENST00000475208 RGS19P49795 217 aa31.9■■■□□ 2.7
TMEM54-205ENST00000475208 DACT2Q5SW24 774 aa31.9■■■□□ 2.7
TMEM54-205ENST00000475208 FBXW7Q969H0 707 aa31.9■■■□□ 2.7
TMEM54-205ENST00000475208 MXD3Q9BW11 206 aa31.9■■■□□ 2.7
TMEM54-205ENST00000475208 RNF186Q9NXI6 227 aa31.9■■■□□ 2.7
TMEM54-205ENST00000475208 SCAF8Q9UPN6 1271 aaKnown RBP31.9■■■□□ 2.7
TMEM54-205ENST00000475208 ZNF646O15015 1829 aaPredicted RBP31.89■■■□□ 2.7
TMEM54-205ENST00000475208 TRPA1O75762 1119 aa31.89■■■□□ 2.7
TMEM54-205ENST00000475208 FKBP1BP68106 108 aa31.89■■■□□ 2.7
TMEM54-205ENST00000475208 MLLT1Q03111 559 aaPredicted RBP31.89■■■□□ 2.7
TMEM54-205ENST00000475208 RASAL3Q86YV0 1011 aa31.89■■■□□ 2.7
TMEM54-205ENST00000475208 CSRNP1Q96S65 589 aa31.88■■■□□ 2.69
TMEM54-205ENST00000475208 COA1Q9GZY4 146 aa31.88■■■□□ 2.69
TMEM54-205ENST00000475208 IL16Q14005 1332 aa31.88■■■□□ 2.69
TMEM54-205ENST00000475208 FLIIQ13045 1269 aa31.87■■■□□ 2.69
TMEM54-205ENST00000475208 GCKRQ14397 625 aa31.87■■■□□ 2.69
TMEM54-205ENST00000475208 NBPF9Q3BBW0 867 aa31.87■■■□□ 2.69
TMEM54-205ENST00000475208 PLA2G12BQ9BX93 195 aa31.87■■■□□ 2.69
TMEM54-205ENST00000475208 LEMD3Q9Y2U8 911 aa31.87■■■□□ 2.69
TMEM54-205ENST00000475208 AKAP11Q9UKA4 1901 aa31.87■■■□□ 2.69
TMEM54-205ENST00000475208 MYO3BQ8WXR4 1341 aa31.86■■■□□ 2.69
TMEM54-205ENST00000475208 ITGA6P23229 1130 aa31.86■■■□□ 2.69
TMEM54-205ENST00000475208 STRIP1Q5VSL9 837 aa31.86■■■□□ 2.69
TMEM54-205ENST00000475208 TXNRD3Q86VQ6 643 aa31.86■■■□□ 2.69
TMEM54-205ENST00000475208 OGFOD1Q8N543 542 aa31.85■■■□□ 2.69
TMEM54-205ENST00000475208 CASP7P55210 303 aa31.84■■■□□ 2.69
TMEM54-205ENST00000475208 FKBP5Q13451 457 aaPredicted RBP31.84■■■□□ 2.69
TMEM54-205ENST00000475208 MOB2Q70IA6 237 aa31.84■■■□□ 2.69
TMEM54-205ENST00000475208 MYH16Q9H6N6 1097 aa31.84■■■□□ 2.69
TMEM54-205ENST00000475208 ZNF804BA4D1E1 1349 aa31.83■■■□□ 2.69
TMEM54-205ENST00000475208 FANCIQ9NVI1 1328 aa31.83■■■□□ 2.69
TMEM54-205ENST00000475208 KLRK1P26718 216 aa31.83■■■□□ 2.69
TMEM54-205ENST00000475208 PRAMEF18Q5VWM3 479 aa31.83■■■□□ 2.69
TMEM54-205ENST00000475208 REM2Q8IYK8 340 aaPredicted RBP31.83■■■□□ 2.69
TMEM54-205ENST00000475208 DNAAF4Q8WXU2 420 aa31.83■■■□□ 2.69
TMEM54-205ENST00000475208 MPHOSPH8Q99549 860 aa31.83■■■□□ 2.69
TMEM54-205ENST00000475208 ANKRD2Q9GZV1 360 aa31.83■■■□□ 2.69
TMEM54-205ENST00000475208 WNT10BO00744 389 aa31.82■■■□□ 2.68
TMEM54-205ENST00000475208 LINS1Q8NG48 757 aa31.81■■■□□ 2.68
TMEM54-205ENST00000475208 UBE2Q2LH0YL09 131 aa31.8■■■□□ 2.68
TMEM54-205ENST00000475208 SASH1O94885 1247 aa31.8■■■□□ 2.68
TMEM54-205ENST00000475208 CSF1RP07333 972 aa31.8■■■□□ 2.68
TMEM54-205ENST00000475208 NCBP3Q53F19 620 aaKnown RBP31.8■■■□□ 2.68
TMEM54-205ENST00000475208 TTLL5Q6EMB2 1281 aa31.79■■■□□ 2.68
TMEM54-205ENST00000475208 KCNJ4P48050 445 aa31.78■■■□□ 2.68
TMEM54-205ENST00000475208 TTLL12Q14166 644 aaPredicted RBP31.78■■■□□ 2.68
TMEM54-205ENST00000475208 MMP14P50281 582 aa31.77■■■□□ 2.68
TMEM54-205ENST00000475208 CHRNDQ07001 517 aa31.77■■■□□ 2.68
TMEM54-205ENST00000475208 KIAA0825Q8IV33 1275 aa31.77■■■□□ 2.68
TMEM54-205ENST00000475208 NF2P35240 595 aa31.76■■■□□ 2.67
TMEM54-205ENST00000475208 GTF2IP78347 998 aa31.76■■■□□ 2.67
TMEM54-205ENST00000475208 MRS2Q9HD23 443 aa31.76■■■□□ 2.67
TMEM54-205ENST00000475208 ANKRD18BA2A2Z9 1011 aa31.75■■■□□ 2.67
TMEM54-205ENST00000475208 VAMP4O75379 141 aa31.75■■■□□ 2.67
TMEM54-205ENST00000475208 HDAC9Q9UKV0 1011 aa31.75■■■□□ 2.67
TMEM54-205ENST00000475208 CACNA1FO60840 1977 aa31.75■■■□□ 2.67
TMEM54-205ENST00000475208 SALL2Q9Y467 1007 aaPredicted RBP31.74■■■□□ 2.67
TMEM54-205ENST00000475208 CTU1Q7Z7A3 348 aaKnown RBP31.73■■■□□ 2.67
TMEM54-205ENST00000475208 APOBEC3FQ8IUX4 373 aaKnown RBP31.73■■■□□ 2.67
TMEM54-205ENST00000475208 CD209Q9NNX6 404 aa31.73■■■□□ 2.67
TMEM54-205ENST00000475208 EXOSC9Q06265 439 aaKnown RBP31.72■■■□□ 2.67
TMEM54-205ENST00000475208 WDR63Q8IWG1 891 aa31.72■■■□□ 2.67
TMEM54-205ENST00000475208 SNAP23O00161 211 aa31.71■■■□□ 2.67
TMEM54-205ENST00000475208 ZBED3Q96IU2 234 aaPredicted RBP31.71■■■□□ 2.67
TMEM54-205ENST00000475208 F6X3S4 739 aa31.7■■■□□ 2.67
TMEM54-205ENST00000475208 TAF5LO75529 589 aa31.7■■■□□ 2.67
TMEM54-205ENST00000475208 FOXO4P98177 505 aa31.7■■■□□ 2.67
TMEM54-205ENST00000475208 CHMP3Q9Y3E7 222 aa31.7■■■□□ 2.67
TMEM54-205ENST00000475208 A0A1B0GUL6 1792 aa31.7■■■□□ 2.67
TMEM54-205ENST00000475208 IRS2Q9Y4H2 1338 aa31.7■■■□□ 2.66
TMEM54-205ENST00000475208 IFIT5Q13325 482 aaKnown RBP31.69■■■□□ 2.66
TMEM54-205ENST00000475208 HELBQ8NG08 1087 aaPredicted RBP31.69■■■□□ 2.66
TMEM54-205ENST00000475208 MKRN3Q13064 507 aaKnown RBP31.68■■■□□ 2.66
TMEM54-205ENST00000475208 PRKG1Q13976 671 aa31.68■■■□□ 2.66
TMEM54-205ENST00000475208 BEND3Q5T5X7 828 aa31.68■■■□□ 2.66
TMEM54-205ENST00000475208 ARMC9Q7Z3E5 817 aa31.68■■■□□ 2.66
TMEM54-205ENST00000475208 TBC1D8O95759 1140 aa31.67■■■□□ 2.66
TMEM54-205ENST00000475208 SOX10P56693 466 aa31.67■■■□□ 2.66
TMEM54-205ENST00000475208 C15orf52Q6ZUT6 534 aaKnown RBP31.67■■■□□ 2.66
TMEM54-205ENST00000475208 CERS5Q8N5B7 392 aa31.67■■■□□ 2.66
TMEM54-205ENST00000475208 PTPN12Q05209 780 aaKnown RBP31.66■■■□□ 2.66
TMEM54-205ENST00000475208 DLGAP5Q15398 846 aa31.66■■■□□ 2.66
TMEM54-205ENST00000475208 COL1A1P02452 1464 aaPredicted RBP31.65■■■□□ 2.66
TMEM54-205ENST00000475208 TM4SF4P48230 202 aa31.65■■■□□ 2.66
TMEM54-205ENST00000475208 LMBR1LQ6UX01 489 aa31.64■■■□□ 2.66
TMEM54-205ENST00000475208 ZNF804AQ7Z570 1209 aa31.64■■■□□ 2.66
TMEM54-205ENST00000475208 ZNF296Q8WUU4 475 aaPredicted RBP31.64■■■□□ 2.66
TMEM54-205ENST00000475208 SREBF2Q12772 1141 aa31.63■■■□□ 2.65
TMEM54-205ENST00000475208 DEFB129Q9H1M3 183 aa31.63■■■□□ 2.65
TMEM54-205ENST00000475208 SPINK5Q9NQ38 1064 aaPredicted RBP31.63■■■□□ 2.65
TMEM54-205ENST00000475208 ANGEL1Q9UNK9 670 aaKnown RBP31.63■■■□□ 2.65
TMEM54-205ENST00000475208 ANP32CO43423 234 aa31.62■■■□□ 2.65
TMEM54-205ENST00000475208 IL1R1P14778 569 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms