RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 RTL9Q8NET4 1388 aa11.96□□□□□ -0.49
PDPN-204ENST00000475043 XDHP47989 1333 aa11.96□□□□□ -0.49
PDPN-204ENST00000475043 PASKQ96RG2 1323 aa11.96□□□□□ -0.49
PDPN-204ENST00000475043 PSMD14O00487 310 aa11.96□□□□□ -0.49
PDPN-204ENST00000475043 CHRM1P11229 460 aaPredicted RBP11.96□□□□□ -0.49
PDPN-204ENST00000475043 ITGA6P23229 1130 aa11.96□□□□□ -0.49
PDPN-204ENST00000475043 IGHMBP2P38935 993 aaKnown RBP11.96□□□□□ -0.49
PDPN-204ENST00000475043 CASP7P55210 303 aa11.96□□□□□ -0.49
PDPN-204ENST00000475043 BEND3Q5T5X7 828 aa11.96□□□□□ -0.49
PDPN-204ENST00000475043 PLA2G12BQ9BX93 195 aa11.96□□□□□ -0.49
PDPN-204ENST00000475043 BSDC1Q9NW68 430 aaPredicted RBP11.96□□□□□ -0.49
PDPN-204ENST00000475043 CHMP3Q9Y3E7 222 aa11.96□□□□□ -0.49
PDPN-204ENST00000475043 ATP2B4P23634 1241 aa11.95□□□□□ -0.5
PDPN-204ENST00000475043 SLFN5Q08AF3 891 aa11.95□□□□□ -0.5
PDPN-204ENST00000475043 FAM161AQ3B820 660 aa11.95□□□□□ -0.5
PDPN-204ENST00000475043 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
PDPN-204ENST00000475043 MPHOSPH8Q99549 860 aa11.95□□□□□ -0.5
PDPN-204ENST00000475043 KCNQ5Q9NR82 932 aa11.95□□□□□ -0.5
PDPN-204ENST00000475043 C9orf78Q9NZ63 289 aaPredicted RBP11.95□□□□□ -0.5
PDPN-204ENST00000475043 MKRN1Q9UHC7 482 aaKnown RBP11.95□□□□□ -0.5
PDPN-204ENST00000475043 CNOT7Q9UIV1 285 aaKnown RBP11.95□□□□□ -0.5
PDPN-204ENST00000475043 MINPP1Q9UNW1 487 aa11.95□□□□□ -0.5
PDPN-204ENST00000475043 ANKRD18BA2A2Z9 1011 aa11.94□□□□□ -0.5
PDPN-204ENST00000475043 TMEM88BA6NKF7 163 aa11.94□□□□□ -0.5
PDPN-204ENST00000475043 H7C1D1 291 aa11.94□□□□□ -0.5
PDPN-204ENST00000475043 MICALL2Q8IY33 904 aa11.94□□□□□ -0.5
PDPN-204ENST00000475043 JMYQ8N9B5 988 aa11.94□□□□□ -0.5
PDPN-204ENST00000475043 SRCIN1Q9C0H9 1055 aa11.94□□□□□ -0.5
PDPN-204ENST00000475043 SCN9AQ15858 1988 aa11.94□□□□□ -0.5
PDPN-204ENST00000475043 SHTN1A0MZ66 631 aa11.93□□□□□ -0.5
PDPN-204ENST00000475043 WTIPA6NIX2 430 aaPredicted RBP11.93□□□□□ -0.5
PDPN-204ENST00000475043 GRM8O00222 908 aa11.93□□□□□ -0.5
PDPN-204ENST00000475043 CSF1RP07333 972 aa11.93□□□□□ -0.5
PDPN-204ENST00000475043 CCT4P50991 539 aaKnown RBP11.93□□□□□ -0.5
PDPN-204ENST00000475043 IFIT5Q13325 482 aaKnown RBP11.93□□□□□ -0.5
PDPN-204ENST00000475043 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
PDPN-204ENST00000475043 MRPL50Q8N5N7 158 aaKnown RBP11.93□□□□□ -0.5
PDPN-204ENST00000475043 SCUBE2Q9NQ36 999 aa11.93□□□□□ -0.5
PDPN-204ENST00000475043 PSME4Q14997 1843 aa11.93□□□□□ -0.5
PDPN-204ENST00000475043 TRPM7Q96QT4 1865 aa11.92□□□□□ -0.5
PDPN-204ENST00000475043 ALDH1L1O75891 902 aa11.92□□□□□ -0.5
PDPN-204ENST00000475043 RPS12P25398 132 aaKnown RBP11.92□□□□□ -0.5
PDPN-204ENST00000475043 FOXO4P98177 505 aa11.92□□□□□ -0.5
PDPN-204ENST00000475043 TAF7LQ5H9L4 462 aa11.92□□□□□ -0.5
PDPN-204ENST00000475043 RBM26Q5T8P6 1007 aaKnown RBP11.92□□□□□ -0.5
PDPN-204ENST00000475043 LMBR1LQ6UX01 489 aa11.92□□□□□ -0.5
PDPN-204ENST00000475043 SAMD7Q7Z3H4 446 aa11.92□□□□□ -0.5
PDPN-204ENST00000475043 SSH1Q8WYL5 1049 aa11.92□□□□□ -0.5
PDPN-204ENST00000475043 DPF2Q92785 391 aa11.92□□□□□ -0.5
PDPN-204ENST00000475043 ANKRD2Q9GZV1 360 aa11.92□□□□□ -0.5
PDPN-204ENST00000475043 ABT1Q9ULW3 272 aaKnown RBP11.92□□□□□ -0.5
PDPN-204ENST00000475043 PTPRCP08575 1304 aa11.91□□□□□ -0.5
PDPN-204ENST00000475043 TRAF5O00463 557 aa11.91□□□□□ -0.5
PDPN-204ENST00000475043 KCNJ4P48050 445 aa11.91□□□□□ -0.5
PDPN-204ENST00000475043 HIRAP54198 1017 aaPredicted RBP11.91□□□□□ -0.5
PDPN-204ENST00000475043 FMR1Q06787 632 aaKnown RBP eCLIP11.91□□□□□ -0.5
PDPN-204ENST00000475043 CCDC57Q2TAC2 916 aa11.91□□□□□ -0.5
PDPN-204ENST00000475043 TBC1D10BQ4KMP7 808 aaPredicted RBP11.91□□□□□ -0.5
PDPN-204ENST00000475043 DIEXFQ68CQ4 756 aaKnown RBP11.91□□□□□ -0.5
PDPN-204ENST00000475043 TRPM4Q8TD43 1214 aa11.91□□□□□ -0.5
PDPN-204ENST00000475043 FBXW7Q969H0 707 aa11.91□□□□□ -0.5
PDPN-204ENST00000475043 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
PDPN-204ENST00000475043 LEMD3Q9Y2U8 911 aa11.91□□□□□ -0.5
PDPN-204ENST00000475043 MED23Q9ULK4 1368 aa11.91□□□□□ -0.5
PDPN-204ENST00000475043 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.5
PDPN-204ENST00000475043 A0A1B0GUL6 1792 aa11.9□□□□□ -0.5
PDPN-204ENST00000475043 VIL1P09327 827 aaKnown RBP11.9□□□□□ -0.5
PDPN-204ENST00000475043 CHRNDQ07001 517 aa11.9□□□□□ -0.5
PDPN-204ENST00000475043 EPHA10Q5JZY3 1008 aa11.9□□□□□ -0.5
PDPN-204ENST00000475043 PODNQ7Z5L7 613 aa11.9□□□□□ -0.5
PDPN-204ENST00000475043 ZC3H15Q8WU90 426 aaKnown RBP11.9□□□□□ -0.5
PDPN-204ENST00000475043 CNTNAP1P78357 1384 aa11.9□□□□□ -0.5
PDPN-204ENST00000475043 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
PDPN-204ENST00000475043 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
PDPN-204ENST00000475043 TAF5LO75529 589 aa11.89□□□□□ -0.51
PDPN-204ENST00000475043 EGFRP00533 1210 aa11.89□□□□□ -0.51
PDPN-204ENST00000475043 NBPF7P0C2Y1 421 aaPredicted RBP11.89□□□□□ -0.51
PDPN-204ENST00000475043 DEFB115Q30KQ5 88 aa11.89□□□□□ -0.51
PDPN-204ENST00000475043 ALDH1L2Q3SY69 923 aa11.89□□□□□ -0.51
PDPN-204ENST00000475043 RSBN1LQ6PCB5 846 aaPredicted RBP11.89□□□□□ -0.51
PDPN-204ENST00000475043 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
PDPN-204ENST00000475043 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
PDPN-204ENST00000475043 TXNRD3Q86VQ6 643 aa11.89□□□□□ -0.51
PDPN-204ENST00000475043 HELBQ8NG08 1087 aaPredicted RBP11.89□□□□□ -0.51
PDPN-204ENST00000475043 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
PDPN-204ENST00000475043 GLIS2Q9BZE0 524 aaPredicted RBP11.89□□□□□ -0.51
PDPN-204ENST00000475043 ZNF408Q9H9D4 720 aa11.89□□□□□ -0.51
PDPN-204ENST00000475043 PLIN1O60240 522 aa11.88□□□□□ -0.51
PDPN-204ENST00000475043 KLRK1P26718 216 aa11.88□□□□□ -0.51
PDPN-204ENST00000475043 KIF4BQ2VIQ3 1234 aa11.88□□□□□ -0.51
PDPN-204ENST00000475043 LDHAL6AQ6ZMR3 332 aa11.88□□□□□ -0.51
PDPN-204ENST00000475043 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
PDPN-204ENST00000475043 TRMT2AQ8IZ69 625 aaKnown RBP11.88□□□□□ -0.51
PDPN-204ENST00000475043 AGBL3Q8NEM8 1001 aa11.88□□□□□ -0.51
PDPN-204ENST00000475043 SUCLG2Q96I99 432 aa11.88□□□□□ -0.51
PDPN-204ENST00000475043 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
PDPN-204ENST00000475043 CNNM1Q9NRU3 951 aa11.88□□□□□ -0.51
PDPN-204ENST00000475043 PGAP2Q9UHJ9 254 aa11.88□□□□□ -0.51
PDPN-204ENST00000475043 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
PDPN-204ENST00000475043 POLR2AP24928 1970 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms