RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 CCT4P50991 539 aaKnown RBP18.4■□□□□ 0.54
COL2A1-205ENST00000474996 MCOLN1Q9GZU1 580 aa18.4■□□□□ 0.54
COL2A1-205ENST00000474996 AKAP11Q9UKA4 1901 aa18.39■□□□□ 0.53
COL2A1-205ENST00000474996 SLC10A3P09131 477 aa18.39■□□□□ 0.53
COL2A1-205ENST00000474996 FLIIQ13045 1269 aa18.39■□□□□ 0.53
COL2A1-205ENST00000474996 GCKRQ14397 625 aa18.39■□□□□ 0.53
COL2A1-205ENST00000474996 FAM161AQ3B820 660 aa18.39■□□□□ 0.53
COL2A1-205ENST00000474996 MXD3Q9BW11 206 aa18.39■□□□□ 0.53
COL2A1-205ENST00000474996 SCAF8Q9UPN6 1271 aaKnown RBP18.39■□□□□ 0.53
COL2A1-205ENST00000474996 IL16Q14005 1332 aa18.39■□□□□ 0.53
COL2A1-205ENST00000474996 IGHMBP2P38935 993 aaKnown RBP18.38■□□□□ 0.53
COL2A1-205ENST00000474996 DGKZQ13574 1117 aa18.38■□□□□ 0.53
COL2A1-205ENST00000474996 FBXW7Q969H0 707 aa18.38■□□□□ 0.53
COL2A1-205ENST00000474996 CACNA1FO60840 1977 aa18.38■□□□□ 0.53
COL2A1-205ENST00000474996 PITPNM2Q9BZ72 1349 aa18.38■□□□□ 0.53
COL2A1-205ENST00000474996 PAPPA2Q9BXP8 1791 aa18.37■□□□□ 0.53
COL2A1-205ENST00000474996 ITGA6P23229 1130 aa18.37■□□□□ 0.53
COL2A1-205ENST00000474996 FKBP5Q13451 457 aaPredicted RBP18.37■□□□□ 0.53
COL2A1-205ENST00000474996 DACT2Q5SW24 774 aa18.37■□□□□ 0.53
COL2A1-205ENST00000474996 TXNRD3Q86VQ6 643 aa18.37■□□□□ 0.53
COL2A1-205ENST00000474996 PLA2G12BQ9BX93 195 aa18.37■□□□□ 0.53
COL2A1-205ENST00000474996 COA1Q9GZY4 146 aa18.37■□□□□ 0.53
COL2A1-205ENST00000474996 SAGE1Q9NXZ1 904 aa18.37■□□□□ 0.53
COL2A1-205ENST00000474996 LEMD3Q9Y2U8 911 aa18.37■□□□□ 0.53
COL2A1-205ENST00000474996 FANCIQ9NVI1 1328 aa18.37■□□□□ 0.53
COL2A1-205ENST00000474996 CASP7P55210 303 aa18.36■□□□□ 0.53
COL2A1-205ENST00000474996 NBPF9Q3BBW0 867 aa18.36■□□□□ 0.53
COL2A1-205ENST00000474996 STRIP1Q5VSL9 837 aa18.36■□□□□ 0.53
COL2A1-205ENST00000474996 RASAL3Q86YV0 1011 aa18.36■□□□□ 0.53
COL2A1-205ENST00000474996 DNAAF4Q8WXU2 420 aa18.36■□□□□ 0.53
COL2A1-205ENST00000474996 RNF186Q9NXI6 227 aa18.36■□□□□ 0.53
COL2A1-205ENST00000474996 ZNF804BA4D1E1 1349 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 TRPA1O75762 1119 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 KLRK1P26718 216 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 FKBP1BP68106 108 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 PRAMEF18Q5VWM3 479 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 MOB2Q70IA6 237 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 OGFOD1Q8N543 542 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 LINS1Q8NG48 757 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 CSRNP1Q96S65 589 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 MPHOSPH8Q99549 860 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 MRS2Q9HD23 443 aa18.35■□□□□ 0.53
COL2A1-205ENST00000474996 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
COL2A1-205ENST00000474996 MYO3BQ8WXR4 1341 aa18.34■□□□□ 0.53
COL2A1-205ENST00000474996 CSF1RP07333 972 aa18.34■□□□□ 0.53
COL2A1-205ENST00000474996 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
COL2A1-205ENST00000474996 ANKRD2Q9GZV1 360 aa18.34■□□□□ 0.53
COL2A1-205ENST00000474996 WNT10BO00744 389 aa18.33■□□□□ 0.52
COL2A1-205ENST00000474996 VAMP4O75379 141 aa18.33■□□□□ 0.52
COL2A1-205ENST00000474996 RGS19P49795 217 aa18.33■□□□□ 0.52
COL2A1-205ENST00000474996 UBE2Q2LH0YL09 131 aa18.32■□□□□ 0.52
COL2A1-205ENST00000474996 SASH1O94885 1247 aa18.32■□□□□ 0.52
COL2A1-205ENST00000474996 MLLT1Q03111 559 aaPredicted RBP18.32■□□□□ 0.52
COL2A1-205ENST00000474996 CHRNDQ07001 517 aa18.32■□□□□ 0.52
COL2A1-205ENST00000474996 TTLL5Q6EMB2 1281 aa18.32■□□□□ 0.52
COL2A1-205ENST00000474996 KCNJ4P48050 445 aa18.31■□□□□ 0.52
COL2A1-205ENST00000474996 GTF2IP78347 998 aa18.31■□□□□ 0.52
COL2A1-205ENST00000474996 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
COL2A1-205ENST00000474996 KIAA0825Q8IV33 1275 aa18.31■□□□□ 0.52
COL2A1-205ENST00000474996 WDR63Q8IWG1 891 aa18.31■□□□□ 0.52
COL2A1-205ENST00000474996 A0A1B0GUL6 1792 aa18.31■□□□□ 0.52
COL2A1-205ENST00000474996 ANKRD18BA2A2Z9 1011 aa18.3■□□□□ 0.52
COL2A1-205ENST00000474996 SNAP23O00161 211 aa18.3■□□□□ 0.52
COL2A1-205ENST00000474996 TTLL12Q14166 644 aaPredicted RBP18.3■□□□□ 0.52
COL2A1-205ENST00000474996 REM2Q8IYK8 340 aaPredicted RBP18.3■□□□□ 0.52
COL2A1-205ENST00000474996 F6X3S4 739 aa18.29■□□□□ 0.52
COL2A1-205ENST00000474996 FOXO4P98177 505 aa18.29■□□□□ 0.52
COL2A1-205ENST00000474996 CD209Q9NNX6 404 aa18.29■□□□□ 0.52
COL2A1-205ENST00000474996 HDAC9Q9UKV0 1011 aa18.29■□□□□ 0.52
COL2A1-205ENST00000474996 ANP32CO43423 234 aa18.28■□□□□ 0.52
COL2A1-205ENST00000474996 TAF5LO75529 589 aa18.28■□□□□ 0.52
COL2A1-205ENST00000474996 NF2P35240 595 aa18.28■□□□□ 0.52
COL2A1-205ENST00000474996 MMP14P50281 582 aa18.28■□□□□ 0.52
COL2A1-205ENST00000474996 BEND3Q5T5X7 828 aa18.28■□□□□ 0.52
COL2A1-205ENST00000474996 HELBQ8NG08 1087 aaPredicted RBP18.28■□□□□ 0.52
COL2A1-205ENST00000474996 CHMP3Q9Y3E7 222 aa18.28■□□□□ 0.52
COL2A1-205ENST00000474996 IRS2Q9Y4H2 1338 aa18.27■□□□□ 0.52
COL2A1-205ENST00000474996 IFIT5Q13325 482 aaKnown RBP18.27■□□□□ 0.52
COL2A1-205ENST00000474996 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.52
COL2A1-205ENST00000474996 PRKG1Q13976 671 aa18.26■□□□□ 0.51
COL2A1-205ENST00000474996 APOBEC3FQ8IUX4 373 aaKnown RBP18.26■□□□□ 0.51
COL2A1-205ENST00000474996 ZBED3Q96IU2 234 aaPredicted RBP18.26■□□□□ 0.51
COL2A1-205ENST00000474996 MKRN3Q13064 507 aaKnown RBP18.25■□□□□ 0.51
COL2A1-205ENST00000474996 EPHA10Q5JZY3 1008 aa18.25■□□□□ 0.51
COL2A1-205ENST00000474996 LMBR1LQ6UX01 489 aa18.25■□□□□ 0.51
COL2A1-205ENST00000474996 C15orf52Q6ZUT6 534 aaKnown RBP18.25■□□□□ 0.51
COL2A1-205ENST00000474996 CERS5Q8N5B7 392 aa18.25■□□□□ 0.51
COL2A1-205ENST00000474996 ECM29Q5VYK3 1845 aa18.24■□□□□ 0.51
COL2A1-205ENST00000474996 ARMC9Q7Z3E5 817 aa18.24■□□□□ 0.51
COL2A1-205ENST00000474996 CTU1Q7Z7A3 348 aaKnown RBP18.24■□□□□ 0.51
COL2A1-205ENST00000474996 ZNF594Q96JF6 807 aaPredicted RBP18.24■□□□□ 0.51
COL2A1-205ENST00000474996 F8W031 263 aaPredicted RBP18.23■□□□□ 0.51
COL2A1-205ENST00000474996 GRM8O00222 908 aa18.23■□□□□ 0.51
COL2A1-205ENST00000474996 TBC1D8O95759 1140 aa18.23■□□□□ 0.51
COL2A1-205ENST00000474996 PTPN12Q05209 780 aaKnown RBP18.23■□□□□ 0.51
COL2A1-205ENST00000474996 DLGAP5Q15398 846 aa18.23■□□□□ 0.51
COL2A1-205ENST00000474996 ZNF804AQ7Z570 1209 aa18.23■□□□□ 0.51
COL2A1-205ENST00000474996 PCDHAC2Q9Y5I4 1007 aa18.23■□□□□ 0.51
COL2A1-205ENST00000474996 PLIN1O60240 522 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms