RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CENPTQ96BT3 561 aa5.75□□□□□ -1.49
NPHP3-206ENST00000474871 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.75□□□□□ -1.49
NPHP3-206ENST00000474871 A0A0B4J203 849 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 MYO1CO00159 1063 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 NPHP1O15259 732 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 NBPF7P0C2Y1 421 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 RPL13P26373 211 aaKnown RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 XPCQ01831 940 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 SNX1Q13596 522 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 ACBD5Q5T8D3 534 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 CDCA2Q69YH5 1023 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 WWC2Q6AWC2 1192 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 FIP1L1Q6UN15 594 aaKnown RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 ZNF771Q7L3S4 317 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 UBXN4Q92575 508 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 GOLGA1Q92805 767 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 CFAP53Q96M91 514 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 GRPEL1Q9HAV7 217 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 DCAF16Q9NXF7 216 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 TRAK1Q9UPV9 953 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 COBLL1Q53SF7 1204 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 CCDC91Q7Z6B0 441 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 RELL1Q8IUW5 271 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 TMEM165Q9HC07 324 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 USP47Q96K76 1375 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 CAMSAP1Q5T5Y3 1602 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 ZC3H13Q5T200 1668 aaKnown RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 KIF13AQ9H1H9 1805 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 MROH2AA6NES4 1674 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 CNTLNQ9NXG0 1405 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 PIK3R4Q99570 1358 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 PLEKHG3A1L390 1219 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 C7P10643 843 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 HARSP12081 509 aaKnown RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 PDE4AP27815 886 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 TRIM42Q8IWZ5 723 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 PDGFDQ9GZP0 370 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 IFT172Q9UG01 1749 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 CCDC7Q96M83 1385 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 SHTN1A0MZ66 631 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 TMEM221A6NGB7 291 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 RPL17P18621 184 aaKnown RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 VCAM1P19320 739 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 ATP6V1AP38606 617 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 WDR43Q15061 677 aaKnown RBP eCLIP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 CCDC30Q5VVM6 783 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 LMNTD2Q8IXW0 634 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 NBPF15Q8N660 670 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 TMEM87BQ96K49 555 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 CDC5LQ99459 802 aaKnown RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 PIF1Q9H611 641 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 RPAP3Q9H6T3 665 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-206ENST00000474871 BCL2L12Q9HB09 334 aa5.74□□□□□ -1.49
NPHP3-206ENST00000474871 SRPK2P78362 688 aaKnown RBP5.73□□□□□ -1.49
NPHP3-206ENST00000474871 HS1BP3Q53T59 392 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 AK7Q96M32 723 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 IP6K2Q9UHH9 426 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 PER1O15534 1290 aaPredicted RBP5.73□□□□□ -1.49
NPHP3-206ENST00000474871 CYP4A11Q02928 519 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 KCTD2Q14681 263 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 WAPLQ7Z5K2 1190 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 C3orf20Q8ND61 904 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 SMARCC1Q92922 1105 aaPredicted RBP5.73□□□□□ -1.49
NPHP3-206ENST00000474871 ERP27Q96DN0 273 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 RPS6KC1Q96S38 1066 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 SEMA4AQ9H3S1 761 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 USP19O94966 1318 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 TAF7Q15545 349 aaPredicted RBP5.73□□□□□ -1.49
NPHP3-206ENST00000474871 RAVER1Q8IY67 606 aaKnown RBP5.73□□□□□ -1.49
NPHP3-206ENST00000474871 ABCC3O15438 1527 aa5.73□□□□□ -1.49
NPHP3-206ENST00000474871 UGGT1Q9NYU2 1555 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 KIF3BO15066 747 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 RBP3P10745 1247 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 HDAC4P56524 1084 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 USP4Q13107 963 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 TCEAL1Q15170 157 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 SYT10Q6XYQ8 523 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 DBX2Q6ZNG2 339 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 TRIM7Q9C029 511 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 IQCGQ9H095 443 aaKnown RBP5.72□□□□□ -1.49
NPHP3-206ENST00000474871 UPF2Q9HAU5 1272 aaKnown RBP5.72□□□□□ -1.49
NPHP3-206ENST00000474871 ZMAT5Q9UDW3 170 aaKnown RBP5.72□□□□□ -1.49
NPHP3-206ENST00000474871 MAFFQ9ULX9 164 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 NUDCQ9Y266 331 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 GZMAP12544 262 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 SLC4A3P48751 1232 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 RWDD2BP57060 319 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 GPR162Q16538 588 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 LRRC31Q6UY01 552 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 SND1Q7KZF4 910 aaKnown RBP eCLIP5.72□□□□□ -1.49
NPHP3-206ENST00000474871 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.72□□□□□ -1.49
NPHP3-206ENST00000474871 UNC45AQ9H3U1 944 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 TFIP11Q9UBB9 837 aaKnown RBP5.72□□□□□ -1.49
NPHP3-206ENST00000474871 TMCC3Q9ULS5 477 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 KIF1BO60333 1816 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 KIF5CO60282 957 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 HIP1RO75146 1068 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 WEE1P30291 646 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 NUBP1P53384 320 aa5.72□□□□□ -1.49
NPHP3-206ENST00000474871 GPSM2P81274 684 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms