RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SDSP20132 328 aa8.11□□□□□ -1.11
ATG4A-207ENST00000474825 TFCP2Q12800 502 aa8.11□□□□□ -1.11
ATG4A-207ENST00000474825 OS9Q13438 667 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-207ENST00000474825 COL23A1Q86Y22 540 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-207ENST00000474825 NUTM1Q86Y26 1132 aa8.11□□□□□ -1.11
ATG4A-207ENST00000474825 IFNLR1Q8IU57 520 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-207ENST00000474825 NLGN1Q8N2Q7 840 aa8.11□□□□□ -1.11
ATG4A-207ENST00000474825 KHSRPQ92945 711 aaKnown RBP eCLIP8.11□□□□□ -1.11
ATG4A-207ENST00000474825 PUS3Q9BZE2 481 aaKnown RBP8.11□□□□□ -1.11
ATG4A-207ENST00000474825 SIL1Q9H173 461 aa8.11□□□□□ -1.11
ATG4A-207ENST00000474825 SPON1Q9HCB6 807 aa8.11□□□□□ -1.11
ATG4A-207ENST00000474825 ECHDC1Q9NTX5 307 aa8.11□□□□□ -1.11
ATG4A-207ENST00000474825 PPP1R1BQ9UD71 204 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-207ENST00000474825 DBNLQ9UJU6 430 aaKnown RBP8.11□□□□□ -1.11
ATG4A-207ENST00000474825 DDX60Q8IY21 1712 aaKnown RBP8.11□□□□□ -1.11
ATG4A-207ENST00000474825 PNPLA7Q6ZV29 1317 aa8.1□□□□□ -1.11
ATG4A-207ENST00000474825 POLRMTO00411 1230 aaKnown RBP8.1□□□□□ -1.11
ATG4A-207ENST00000474825 ERC2O15083 957 aa8.1□□□□□ -1.11
ATG4A-207ENST00000474825 EIF5BO60841 1220 aaKnown RBP8.1□□□□□ -1.11
ATG4A-207ENST00000474825 CDC45O75419 566 aa8.1□□□□□ -1.11
ATG4A-207ENST00000474825 PHF14O94880 888 aa8.1□□□□□ -1.11
ATG4A-207ENST00000474825 IFIT2P09913 472 aaKnown RBP8.1□□□□□ -1.11
ATG4A-207ENST00000474825 ATP5JP18859 108 aa8.1□□□□□ -1.11
ATG4A-207ENST00000474825 FGFR2P21802 821 aa8.1□□□□□ -1.11
ATG4A-207ENST00000474825 SLC15A2Q16348 729 aa8.1□□□□□ -1.11
ATG4A-207ENST00000474825 CRY2Q49AN0 593 aa8.1□□□□□ -1.11
ATG4A-207ENST00000474825 LDHAL6AQ6ZMR3 332 aa8.1□□□□□ -1.11
ATG4A-207ENST00000474825 AACSQ86V21 672 aa8.1□□□□□ -1.11
ATG4A-207ENST00000474825 NBPF5PQ86XG9 351 aaPredicted RBP8.1□□□□□ -1.11
ATG4A-207ENST00000474825 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.1□□□□□ -1.11
ATG4A-207ENST00000474825 ZNF594Q96JF6 807 aaPredicted RBP8.1□□□□□ -1.11
ATG4A-207ENST00000474825 ZNF512BQ96KM6 892 aaPredicted RBP8.1□□□□□ -1.11
ATG4A-207ENST00000474825 STK32BQ9NY57 414 aa8.1□□□□□ -1.11
ATG4A-207ENST00000474825 MROH5Q6ZUA9 1318 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 EPB41L2O43491 1005 aaKnown RBP8.09□□□□□ -1.11
ATG4A-207ENST00000474825 PDE8BO95263 885 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 SERPINB2P05120 415 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 DDR1Q08345 913 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 PRR5LQ6MZQ0 368 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 TBC1D9Q6ZT07 1266 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 GPATCH3Q96I76 525 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 NLRP3Q96P20 1036 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 ANO8Q9HCE9 1232 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-207ENST00000474825 SEC31BQ9NQW1 1179 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 BSDC1Q9NW68 430 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-207ENST00000474825 TLR7Q9NYK1 1049 aaKnown RBP8.09□□□□□ -1.11
ATG4A-207ENST00000474825 TFCP2L1Q9NZI6 479 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 CEP126Q9P2H0 1117 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 AKAP2Q9Y2D5 859 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 CHMP3Q9Y3E7 222 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 ZNF609O15014 1411 aa8.09□□□□□ -1.11
ATG4A-207ENST00000474825 TUBGCP6Q96RT7 1819 aa8.08□□□□□ -1.12
ATG4A-207ENST00000474825 MYH3P11055 1940 aa8.08□□□□□ -1.12
ATG4A-207ENST00000474825 A0A1B0GUL7 405 aa8.08□□□□□ -1.12
ATG4A-207ENST00000474825 HOXA10P31260 410 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-207ENST00000474825 POTEEQ6S8J3 1075 aa8.08□□□□□ -1.12
ATG4A-207ENST00000474825 BICDL1Q6ZP65 573 aa8.08□□□□□ -1.12
ATG4A-207ENST00000474825 CDC5LQ99459 802 aaKnown RBP8.08□□□□□ -1.12
ATG4A-207ENST00000474825 DBNDD2Q9BQY9 259 aa8.08□□□□□ -1.12
ATG4A-207ENST00000474825 CCDC8Q9H0W5 538 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-207ENST00000474825 QSER1Q2KHR3 1735 aa8.08□□□□□ -1.12
ATG4A-207ENST00000474825 NRXN2Q9P2S2 1712 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 FAM177BA6PVY3 158 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 CHMLP26374 656 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 TIMM10P62072 90 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 TAF7LQ5H9L4 462 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 TSHZ3Q63HK5 1081 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 CNBD1Q8NA66 436 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 EVI5LQ96CN4 794 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 TBC1D32Q96NH3 1257 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 CCDC85AQ96PX6 553 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-207ENST00000474825 HAUS7Q99871 368 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 SNRKQ9NRH2 765 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 CNNM1Q9NRU3 951 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 RFX7Q2KHR2 1363 aa8.07□□□□□ -1.12
ATG4A-207ENST00000474825 GTF2E1P29083 439 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-207ENST00000474825 IGHMBP2P38935 993 aaKnown RBP8.06□□□□□ -1.12
ATG4A-207ENST00000474825 RBM25P49756 843 aaKnown RBP8.06□□□□□ -1.12
ATG4A-207ENST00000474825 RPS8P62241 208 aaKnown RBP8.06□□□□□ -1.12
ATG4A-207ENST00000474825 PUM3Q15397 648 aaKnown RBP8.06□□□□□ -1.12
ATG4A-207ENST00000474825 ATP2B3Q16720 1220 aa8.06□□□□□ -1.12
ATG4A-207ENST00000474825 METTL24Q5JXM2 366 aa8.06□□□□□ -1.12
ATG4A-207ENST00000474825 ANKRD18AQ8IVF6 992 aa8.06□□□□□ -1.12
ATG4A-207ENST00000474825 CNTROBQ8N137 903 aa8.06□□□□□ -1.12
ATG4A-207ENST00000474825 SLC16A10Q8TF71 515 aa8.06□□□□□ -1.12
ATG4A-207ENST00000474825 LPIN2Q92539 896 aa8.06□□□□□ -1.12
ATG4A-207ENST00000474825 IL17RAQ96F46 866 aa8.06□□□□□ -1.12
ATG4A-207ENST00000474825 XAGE2Q96GT9 111 aa8.06□□□□□ -1.12
ATG4A-207ENST00000474825 BRIP1Q9BX63 1249 aa8.06□□□□□ -1.12
ATG4A-207ENST00000474825 MINPP1Q9UNW1 487 aa8.06□□□□□ -1.12
ATG4A-207ENST00000474825 COL4A1P02462 1669 aa8.05□□□□□ -1.12
ATG4A-207ENST00000474825 ST5P78524 1137 aa8.05□□□□□ -1.12
ATG4A-207ENST00000474825 CHRNDQ07001 517 aa8.05□□□□□ -1.12
ATG4A-207ENST00000474825 GRAPQ13588 217 aa8.05□□□□□ -1.12
ATG4A-207ENST00000474825 UBE4AQ14139 1066 aa8.05□□□□□ -1.12
ATG4A-207ENST00000474825 GRAPLQ8TC17 118 aaPredicted RBP8.05□□□□□ -1.12
ATG4A-207ENST00000474825 CELF1Q92879 486 aaKnown RBP8.05□□□□□ -1.12
ATG4A-207ENST00000474825 CRAMP1Q96RY5 1269 aa8.05□□□□□ -1.12
ATG4A-207ENST00000474825 MPHOSPH8Q99549 860 aa8.05□□□□□ -1.12
ATG4A-207ENST00000474825 ESYT1Q9BSJ8 1104 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms