RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 HELLSQ9NRZ9 838 aa23.81■■□□□ 1.4
SSR1-204ENST00000474597 CD2BP2O95400 341 aaKnown RBP23.8■■□□□ 1.4
SSR1-204ENST00000474597 ZNF589Q86UQ0 364 aaPredicted RBP23.8■■□□□ 1.4
SSR1-204ENST00000474597 SLKQ9H2G2 1235 aaPredicted RBP23.8■■□□□ 1.4
SSR1-204ENST00000474597 ZFYP08048 801 aaPredicted RBP23.8■■□□□ 1.4
SSR1-204ENST00000474597 NEK4P51957 841 aa23.8■■□□□ 1.4
SSR1-204ENST00000474597 UBE4AQ14139 1066 aa23.8■■□□□ 1.4
SSR1-204ENST00000474597 PI16Q6UXB8 463 aa23.8■■□□□ 1.4
SSR1-204ENST00000474597 COL23A1Q86Y22 540 aaPredicted RBP23.8■■□□□ 1.4
SSR1-204ENST00000474597 MAP4K1Q92918 833 aa23.8■■□□□ 1.4
SSR1-204ENST00000474597 IL17RAQ96F46 866 aa23.8■■□□□ 1.4
SSR1-204ENST00000474597 RBM8AQ9Y5S9 174 aaKnown RBP23.8■■□□□ 1.4
SSR1-204ENST00000474597 HSP90AA1P07900 732 aaKnown RBP23.79■■□□□ 1.4
SSR1-204ENST00000474597 NLGN1Q8N2Q7 840 aa23.79■■□□□ 1.4
SSR1-204ENST00000474597 RPGRQ92834 1020 aaKnown RBP23.79■■□□□ 1.4
SSR1-204ENST00000474597 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.79■■□□□ 1.4
SSR1-204ENST00000474597 ZMYM1Q5SVZ6 1142 aa23.78■■□□□ 1.4
SSR1-204ENST00000474597 PRPF40BQ6NWY9 871 aaKnown RBP23.78■■□□□ 1.4
SSR1-204ENST00000474597 ANKRD2Q9GZV1 360 aa23.78■■□□□ 1.4
SSR1-204ENST00000474597 SNX14Q9Y5W7 946 aa23.78■■□□□ 1.4
SSR1-204ENST00000474597 POLRMTO00411 1230 aaKnown RBP23.77■■□□□ 1.4
SSR1-204ENST00000474597 CHGBP05060 677 aa23.77■■□□□ 1.4
SSR1-204ENST00000474597 ZKSCAN1P17029 563 aaPredicted RBP23.77■■□□□ 1.4
SSR1-204ENST00000474597 ZSCAN25Q6NSZ9 544 aa23.77■■□□□ 1.4
SSR1-204ENST00000474597 IL27Q8NEV9 243 aa23.77■■□□□ 1.4
SSR1-204ENST00000474597 SEC62Q99442 399 aaKnown RBP23.77■■□□□ 1.4
SSR1-204ENST00000474597 DDR1Q08345 913 aa23.77■■□□□ 1.4
SSR1-204ENST00000474597 GRAPQ13588 217 aa23.77■■□□□ 1.4
SSR1-204ENST00000474597 RNF20Q5VTR2 975 aa23.77■■□□□ 1.4
SSR1-204ENST00000474597 GRAPLQ8TC17 118 aaPredicted RBP23.77■■□□□ 1.4
SSR1-204ENST00000474597 NECTIN1Q15223 517 aa23.76■■□□□ 1.39
SSR1-204ENST00000474597 CCDC129Q6ZRS4 1044 aa23.76■■□□□ 1.39
SSR1-204ENST00000474597 SPATA5Q8NB90 893 aa23.76■■□□□ 1.39
SSR1-204ENST00000474597 BCAMP50895 628 aa23.75■■□□□ 1.39
SSR1-204ENST00000474597 WASHC4Q2M389 1173 aa23.75■■□□□ 1.39
SSR1-204ENST00000474597 CAVIN4Q5BKX8 364 aa23.75■■□□□ 1.39
SSR1-204ENST00000474597 GNL3LQ9NVN8 582 aaKnown RBP23.75■■□□□ 1.39
SSR1-204ENST00000474597 CYP2E1P05181 493 aaPredicted RBP23.75■■□□□ 1.39
SSR1-204ENST00000474597 MCM2P49736 904 aa23.75■■□□□ 1.39
SSR1-204ENST00000474597 SF3B2Q13435 895 aaKnown RBP23.75■■□□□ 1.39
SSR1-204ENST00000474597 CREB3L3Q68CJ9 461 aa23.75■■□□□ 1.39
SSR1-204ENST00000474597 HMG20BQ9P0W2 317 aa23.75■■□□□ 1.39
SSR1-204ENST00000474597 EN1Q05925 392 aaPredicted RBP23.74■■□□□ 1.39
SSR1-204ENST00000474597 RASGRF1Q13972 1273 aa23.74■■□□□ 1.39
SSR1-204ENST00000474597 EZH2Q15910 746 aaKnown RBP23.74■■□□□ 1.39
SSR1-204ENST00000474597 VPS37DQ86XT2 251 aa23.74■■□□□ 1.39
SSR1-204ENST00000474597 RASEFQ8IZ41 740 aa23.74■■□□□ 1.39
SSR1-204ENST00000474597 SLFNL1Q499Z3 407 aa23.73■■□□□ 1.39
SSR1-204ENST00000474597 KCNB2Q92953 911 aa23.73■■□□□ 1.39
SSR1-204ENST00000474597 RBM17Q96I25 401 aaKnown RBP23.73■■□□□ 1.39
SSR1-204ENST00000474597 U3KPZ7 1027 aaPredicted RBP23.73■■□□□ 1.39
SSR1-204ENST00000474597 IDH1O75874 414 aaKnown RBP23.73■■□□□ 1.39
SSR1-204ENST00000474597 APPBP2Q92624 585 aa23.73■■□□□ 1.39
SSR1-204ENST00000474597 UPF3BQ9BZI7 483 aaKnown RBP23.73■■□□□ 1.39
SSR1-204ENST00000474597 MYO5AQ9Y4I1 1855 aaKnown RBP23.72■■□□□ 1.39
SSR1-204ENST00000474597 MAST3O60307 1309 aa23.72■■□□□ 1.39
SSR1-204ENST00000474597 PNPLA7Q6ZV29 1317 aa23.72■■□□□ 1.39
SSR1-204ENST00000474597 SLC27A2O14975 620 aa23.72■■□□□ 1.39
SSR1-204ENST00000474597 CRY2Q49AN0 593 aa23.72■■□□□ 1.39
SSR1-204ENST00000474597 PIH1D3Q9NQM4 214 aaKnown RBP23.72■■□□□ 1.39
SSR1-204ENST00000474597 GYG1P46976 350 aa23.71■■□□□ 1.39
SSR1-204ENST00000474597 CAMKK2Q96RR4 588 aa23.71■■□□□ 1.39
SSR1-204ENST00000474597 SLC9C2Q5TAH2 1124 aa23.7■■□□□ 1.39
SSR1-204ENST00000474597 OSBP2Q969R2 916 aa23.7■■□□□ 1.39
SSR1-204ENST00000474597 DSCC1Q9BVC3 393 aa23.7■■□□□ 1.39
SSR1-204ENST00000474597 STK32BQ9NY57 414 aa23.7■■□□□ 1.39
SSR1-204ENST00000474597 PARP3Q9Y6F1 533 aa23.7■■□□□ 1.39
SSR1-204ENST00000474597 M0R2C6 588 aa23.7■■□□□ 1.38
SSR1-204ENST00000474597 CASTP20810 708 aaKnown RBP23.7■■□□□ 1.38
SSR1-204ENST00000474597 ADD2P35612 726 aa23.7■■□□□ 1.38
SSR1-204ENST00000474597 JAKMIP1Q96N16 626 aaKnown RBP23.7■■□□□ 1.38
SSR1-204ENST00000474597 DOCK2Q92608 1830 aa23.69■■□□□ 1.38
SSR1-204ENST00000474597 ZNF804BA4D1E1 1349 aa23.69■■□□□ 1.38
SSR1-204ENST00000474597 PSMA5P28066 241 aa23.69■■□□□ 1.38
SSR1-204ENST00000474597 MAP3K12Q12852 859 aa23.69■■□□□ 1.38
SSR1-204ENST00000474597 ANKIB1Q9P2G1 1089 aa23.69■■□□□ 1.38
SSR1-204ENST00000474597 BAG6P46379 1132 aa23.68■■□□□ 1.38
SSR1-204ENST00000474597 TM6SF1Q9BZW5 370 aa23.68■■□□□ 1.38
SSR1-204ENST00000474597 MMP10P09238 476 aa23.68■■□□□ 1.38
SSR1-204ENST00000474597 UBE3CQ15386 1083 aa23.68■■□□□ 1.38
SSR1-204ENST00000474597 SLC15A2Q16348 729 aa23.68■■□□□ 1.38
SSR1-204ENST00000474597 FOXD4L1Q9NU39 408 aa23.68■■□□□ 1.38
SSR1-204ENST00000474597 NRXN2Q9P2S2 1712 aa23.68■■□□□ 1.38
SSR1-204ENST00000474597 MYH13Q9UKX3 1938 aa23.67■■□□□ 1.38
SSR1-204ENST00000474597 HSPD1P10809 573 aaKnown RBP23.67■■□□□ 1.38
SSR1-204ENST00000474597 KRT32Q14532 448 aa23.67■■□□□ 1.38
SSR1-204ENST00000474597 FAM84BQ96KN1 310 aaPredicted RBP23.67■■□□□ 1.38
SSR1-204ENST00000474597 CHMP5Q9NZZ3 219 aa23.67■■□□□ 1.38
SSR1-204ENST00000474597 IQSEC3Q9UPP2 1182 aaPredicted RBP23.67■■□□□ 1.38
SSR1-204ENST00000474597 CYP46A1Q9Y6A2 500 aa23.67■■□□□ 1.38
SSR1-204ENST00000474597 WTIPA6NIX2 430 aaPredicted RBP23.66■■□□□ 1.38
SSR1-204ENST00000474597 FRAT2O75474 233 aaPredicted RBP23.66■■□□□ 1.38
SSR1-204ENST00000474597 PDE6AP16499 860 aa23.66■■□□□ 1.38
SSR1-204ENST00000474597 ADCK5Q3MIX3 580 aa23.66■■□□□ 1.38
SSR1-204ENST00000474597 MSL1Q68DK7 614 aa23.66■■□□□ 1.38
SSR1-204ENST00000474597 ANP32EQ9BTT0 268 aa23.66■■□□□ 1.38
SSR1-204ENST00000474597 BRIP1Q9BX63 1249 aa23.66■■□□□ 1.38
SSR1-204ENST00000474597 ANO8Q9HCE9 1232 aaPredicted RBP23.66■■□□□ 1.38
SSR1-204ENST00000474597 DENND2AQ9ULE3 1009 aa23.66■■□□□ 1.38
SSR1-204ENST00000474597 LEMD3Q9Y2U8 911 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms