RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 DBNLQ9UJU6 430 aaKnown RBP12.83□□□□□ -0.36
CASC3-204ENST00000474190 FER1L6Q2WGJ9 1857 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 MED23Q9ULK4 1368 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 A0A1B0GUL6 1792 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 A0A1B0GUL7 405 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 KIF3CO14782 793 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 ZBTB22O15209 634 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 AOC3Q16853 763 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 ARHGAP27Q6ZUM4 889 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 LPIN2Q92539 896 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 KIF1BPQ96EK5 621 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 RWDD1Q9H446 243 aaPredicted RBP12.82□□□□□ -0.36
CASC3-204ENST00000474190 KCNQ5Q9NR82 932 aa12.82□□□□□ -0.36
CASC3-204ENST00000474190 COL1A1P02452 1464 aaPredicted RBP12.81□□□□□ -0.36
CASC3-204ENST00000474190 APBB1O00213 710 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 PDE4AP27815 886 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 IARSP41252 1262 aaKnown RBP12.81□□□□□ -0.36
CASC3-204ENST00000474190 GYG1P46976 350 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 BCAMP50895 628 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 NUCB1Q02818 461 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 ATP2B3Q16720 1220 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 B4GALNT3Q6L9W6 998 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 SKAP1Q86WV1 359 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 GCC1Q96CN9 775 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 XAGE2Q96GT9 111 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 DBNDD2Q9BQY9 259 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
CASC3-204ENST00000474190 C6orf229H3BNL8 230 aa12.8□□□□□ -0.36
CASC3-204ENST00000474190 CAPN15O75808 1086 aa12.8□□□□□ -0.36
CASC3-204ENST00000474190 PHKA1P46020 1223 aa12.8□□□□□ -0.36
CASC3-204ENST00000474190 WASHC4Q2M389 1173 aa12.8□□□□□ -0.36
CASC3-204ENST00000474190 HSP90AB4PQ58FF6 505 aa12.8□□□□□ -0.36
CASC3-204ENST00000474190 LRRCC1Q9C099 1032 aa12.8□□□□□ -0.36
CASC3-204ENST00000474190 CCDC8Q9H0W5 538 aaPredicted RBP12.8□□□□□ -0.36
CASC3-204ENST00000474190 VPS33BQ9H267 617 aa12.8□□□□□ -0.36
CASC3-204ENST00000474190 FZD9O00144 591 aa12.79□□□□□ -0.36
CASC3-204ENST00000474190 RIMBP2O15034 1052 aa12.79□□□□□ -0.36
CASC3-204ENST00000474190 NEFLP07196 543 aa12.79□□□□□ -0.36
CASC3-204ENST00000474190 IL1R1P14778 569 aa12.79□□□□□ -0.36
CASC3-204ENST00000474190 LMNB1P20700 586 aa12.79□□□□□ -0.36
CASC3-204ENST00000474190 SCARF1Q14162 830 aa12.79□□□□□ -0.36
CASC3-204ENST00000474190 DOK7Q18PE1 504 aa12.79□□□□□ -0.36
CASC3-204ENST00000474190 ERC1Q8IUD2 1116 aa12.79□□□□□ -0.36
CASC3-204ENST00000474190 DNAJC5GQ8N7S2 189 aa12.79□□□□□ -0.36
CASC3-204ENST00000474190 TDRD7Q8NHU6 1098 aaKnown RBP12.79□□□□□ -0.36
CASC3-204ENST00000474190 CD209Q9NNX6 404 aa12.79□□□□□ -0.36
CASC3-204ENST00000474190 PPP4R2Q9NY27 417 aa12.79□□□□□ -0.36
CASC3-204ENST00000474190 CACNA1SQ13698 1873 aa12.78□□□□□ -0.36
CASC3-204ENST00000474190 PPIP5K2O43314 1243 aa12.78□□□□□ -0.36
CASC3-204ENST00000474190 APLP1P51693 650 aa12.78□□□□□ -0.36
CASC3-204ENST00000474190 OS9Q13438 667 aaPredicted RBP12.78□□□□□ -0.36
CASC3-204ENST00000474190 COL13A1Q5TAT6 717 aaPredicted RBP12.78□□□□□ -0.36
CASC3-204ENST00000474190 C9orf131Q5VYM1 1079 aa12.78□□□□□ -0.36
CASC3-204ENST00000474190 CCDC102BQ68D86 513 aa12.78□□□□□ -0.36
CASC3-204ENST00000474190 AACSQ86V21 672 aa12.78□□□□□ -0.36
CASC3-204ENST00000474190 DBNDD1Q9H9R9 158 aa12.78□□□□□ -0.36
CASC3-204ENST00000474190 SLC5A1P13866 664 aa12.77□□□□□ -0.37
CASC3-204ENST00000474190 RASGRF1Q13972 1273 aa12.77□□□□□ -0.37
CASC3-204ENST00000474190 ANKRD45Q5TZF3 282 aa12.77□□□□□ -0.37
CASC3-204ENST00000474190 PI16Q6UXB8 463 aa12.77□□□□□ -0.37
CASC3-204ENST00000474190 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.37
CASC3-204ENST00000474190 SUPT20HQ8NEM7 779 aa12.77□□□□□ -0.37
CASC3-204ENST00000474190 ZNF512BQ96KM6 892 aaPredicted RBP12.77□□□□□ -0.37
CASC3-204ENST00000474190 COA1Q9GZY4 146 aa12.77□□□□□ -0.37
CASC3-204ENST00000474190 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.37
CASC3-204ENST00000474190 ZNF541Q9H0D2 1346 aa12.77□□□□□ -0.37
CASC3-204ENST00000474190 ECE2O60344 883 aa12.76□□□□□ -0.37
CASC3-204ENST00000474190 IFIT1P09914 478 aaKnown RBP12.76□□□□□ -0.37
CASC3-204ENST00000474190 ARID4AP29374 1257 aaPredicted RBP12.76□□□□□ -0.37
CASC3-204ENST00000474190 HIBADHP31937 336 aaKnown RBP12.76□□□□□ -0.37
CASC3-204ENST00000474190 GRIK5Q16478 980 aa12.76□□□□□ -0.37
CASC3-204ENST00000474190 TSHZ3Q63HK5 1081 aa12.76□□□□□ -0.37
CASC3-204ENST00000474190 LARGE2Q8N3Y3 721 aa12.76□□□□□ -0.37
CASC3-204ENST00000474190 CERS5Q8N5B7 392 aa12.76□□□□□ -0.37
CASC3-204ENST00000474190 PI4K2BQ8TCG2 481 aa12.76□□□□□ -0.37
CASC3-204ENST00000474190 EYA3Q99504 573 aa12.76□□□□□ -0.37
CASC3-204ENST00000474190 ZC3H12CQ9C0D7 883 aaKnown RBP12.76□□□□□ -0.37
CASC3-204ENST00000474190 LNPKQ9C0E8 428 aa12.76□□□□□ -0.37
CASC3-204ENST00000474190 PCNTO95613 3336 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 MCAMP43121 646 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 KCNJ4P48050 445 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 CXCL9Q07325 125 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 FAM205AQ6ZU69 1335 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 CENPQQ7L2Z9 268 aaPredicted RBP12.75□□□□□ -0.37
CASC3-204ENST00000474190 PLEKHM2Q8IWE5 1019 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 CLASRPQ8N2M8 674 aaKnown RBP12.75□□□□□ -0.37
CASC3-204ENST00000474190 NEUROD6Q96NK8 337 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 GMLQ99445 158 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 MXD3Q9BW11 206 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 TMX4Q9H1E5 349 aaPredicted RBP12.75□□□□□ -0.37
CASC3-204ENST00000474190 RNF181Q9P0P0 153 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 HMG20BQ9P0W2 317 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 STAP2Q9UGK3 403 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
CASC3-204ENST00000474190 IQSEC3Q9UPP2 1182 aaPredicted RBP12.75□□□□□ -0.37
CASC3-204ENST00000474190 DACT2Q5SW24 774 aa12.74□□□□□ -0.37
CASC3-204ENST00000474190 PODNQ7Z5L7 613 aa12.74□□□□□ -0.37
CASC3-204ENST00000474190 ZNF384Q8TF68 577 aa12.74□□□□□ -0.37
CASC3-204ENST00000474190 CCDC136Q96JN2 1154 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms