RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ELOA3DA6NLF2 546 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-212ENST00000473961 UBAP1LF5GYI3 381 aa6.57□□□□□ -1.36
BRCA1-212ENST00000473961 MAPTP10636 758 aaKnown RBP6.57□□□□□ -1.36
BRCA1-212ENST00000473961 HDLBPQ00341 1268 aaKnown RBP6.57□□□□□ -1.36
BRCA1-212ENST00000473961 TRIM28Q13263 835 aaKnown RBP6.57□□□□□ -1.36
BRCA1-212ENST00000473961 ORC1Q13415 861 aa6.57□□□□□ -1.36
BRCA1-212ENST00000473961 ELOA3BQ3SY89 546 aa6.57□□□□□ -1.36
BRCA1-212ENST00000473961 TXNRD3Q86VQ6 643 aa6.57□□□□□ -1.36
BRCA1-212ENST00000473961 ELOA3Q8NG57 546 aa6.57□□□□□ -1.36
BRCA1-212ENST00000473961 TP53INP1Q96A56 240 aa6.57□□□□□ -1.36
BRCA1-212ENST00000473961 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
BRCA1-212ENST00000473961 TGIF2Q9GZN2 237 aa6.57□□□□□ -1.36
BRCA1-212ENST00000473961 CCSER2Q9H7U1 834 aa6.57□□□□□ -1.36
BRCA1-212ENST00000473961 BCS1LQ9Y276 419 aa6.57□□□□□ -1.36
BRCA1-212ENST00000473961 C9orf172C9J069 976 aa6.56□□□□□ -1.36
BRCA1-212ENST00000473961 ATXN7O15265 892 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-212ENST00000473961 PHACTR2O75167 634 aa6.56□□□□□ -1.36
BRCA1-212ENST00000473961 TNP2Q05952 138 aa6.56□□□□□ -1.36
BRCA1-212ENST00000473961 NT5DC4Q86YG4 428 aa6.56□□□□□ -1.36
BRCA1-212ENST00000473961 CMTR1Q8N1G2 835 aaKnown RBP6.56□□□□□ -1.36
BRCA1-212ENST00000473961 UBXN4Q92575 508 aa6.56□□□□□ -1.36
BRCA1-212ENST00000473961 HSH2DQ96JZ2 352 aa6.56□□□□□ -1.36
BRCA1-212ENST00000473961 GGNBP2Q9H3C7 697 aa6.56□□□□□ -1.36
BRCA1-212ENST00000473961 RTCBQ9Y3I0 505 aaKnown RBP6.56□□□□□ -1.36
BRCA1-212ENST00000473961 RNF114Q9Y508 228 aa6.56□□□□□ -1.36
BRCA1-212ENST00000473961 TNFRSF21O75509 655 aa6.55□□□□□ -1.36
BRCA1-212ENST00000473961 SELPP16109 830 aa6.55□□□□□ -1.36
BRCA1-212ENST00000473961 ATP4AP20648 1035 aa6.55□□□□□ -1.36
BRCA1-212ENST00000473961 INPP5BP32019 993 aa6.55□□□□□ -1.36
BRCA1-212ENST00000473961 IRAK1P51617 712 aa6.55□□□□□ -1.36
BRCA1-212ENST00000473961 NLRP8Q86W28 1048 aa6.55□□□□□ -1.36
BRCA1-212ENST00000473961 CEP63Q96MT8 703 aa6.55□□□□□ -1.36
BRCA1-212ENST00000473961 SSBP4Q9BWG4 385 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-212ENST00000473961 PRDM6Q9NQX0 595 aa6.55□□□□□ -1.36
BRCA1-212ENST00000473961 PCMTD2Q9NV79 361 aa6.55□□□□□ -1.36
BRCA1-212ENST00000473961 PPP4R2Q9NY27 417 aa6.55□□□□□ -1.36
BRCA1-212ENST00000473961 DMGDHQ9UI17 866 aaKnown RBP6.55□□□□□ -1.36
BRCA1-212ENST00000473961 M0R082 166 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 OPLAHO14841 1288 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 NID1P14543 1247 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 TAL1P17542 331 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-212ENST00000473961 FANCCQ00597 558 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 LRRC69Q6ZNQ3 347 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 ZNF280CQ8ND82 737 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 ZNF417Q8TAU3 575 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 C7orf43Q8WVR3 580 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 ZNF587Q96SQ5 575 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-212ENST00000473961 ZIC5Q96T25 663 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 C12orf49Q9H741 205 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 ELP3Q9H9T3 547 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 FAM8A1Q9UBU6 413 aa6.54□□□□□ -1.36
BRCA1-212ENST00000473961 A0A1W2PNR3 127 aa6.53□□□□□ -1.36
BRCA1-212ENST00000473961 JAG1P78504 1218 aa6.53□□□□□ -1.36
BRCA1-212ENST00000473961 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.53□□□□□ -1.36
BRCA1-212ENST00000473961 LCE4AQ5TA78 99 aa6.53□□□□□ -1.36
BRCA1-212ENST00000473961 C8orf86Q6ZUL3 223 aa6.53□□□□□ -1.36
BRCA1-212ENST00000473961 HS2ST1Q7LGA3 356 aa6.53□□□□□ -1.36
BRCA1-212ENST00000473961 CCDC74AQ96AQ1 378 aa6.53□□□□□ -1.36
BRCA1-212ENST00000473961 SETDB2Q96T68 719 aa6.53□□□□□ -1.36
BRCA1-212ENST00000473961 ZFYVE28Q9HCC9 887 aa6.53□□□□□ -1.36
BRCA1-212ENST00000473961 STARD13Q9Y3M8 1113 aa6.53□□□□□ -1.36
BRCA1-212ENST00000473961 A6NHS1 94 aa6.52□□□□□ -1.37
BRCA1-212ENST00000473961 KHNYNO15037 678 aaKnown RBP6.52□□□□□ -1.37
BRCA1-212ENST00000473961 XYLBO75191 536 aa6.52□□□□□ -1.37
BRCA1-212ENST00000473961 EGFRP00533 1210 aa6.52□□□□□ -1.37
BRCA1-212ENST00000473961 TYRO3Q06418 890 aa6.52□□□□□ -1.37
BRCA1-212ENST00000473961 SAMD5Q5TGI4 173 aa6.52□□□□□ -1.37
BRCA1-212ENST00000473961 TTC39BQ5VTQ0 682 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-212ENST00000473961 ABI2Q9NYB9 513 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-212ENST00000473961 GADD45BO75293 160 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-212ENST00000473961 ALBP02768 609 aa6.51□□□□□ -1.37
BRCA1-212ENST00000473961 ALAS2P22557 587 aa6.51□□□□□ -1.37
BRCA1-212ENST00000473961 C9orf131Q5VYM1 1079 aa6.51□□□□□ -1.37
BRCA1-212ENST00000473961 NLRP13Q86W25 1043 aa6.51□□□□□ -1.37
BRCA1-212ENST00000473961 METTL16Q86W50 562 aaKnown RBP6.51□□□□□ -1.37
BRCA1-212ENST00000473961 ZNF654Q8IZM8 581 aa6.51□□□□□ -1.37
BRCA1-212ENST00000473961 BRD7Q9NPI1 651 aa6.51□□□□□ -1.37
BRCA1-212ENST00000473961 PPP1R1BQ9UD71 204 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-212ENST00000473961 FOXD3Q9UJU5 478 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-212ENST00000473961 PRR12Q9ULL5 1215 aa6.51□□□□□ -1.37
BRCA1-212ENST00000473961 TRAK1Q9UPV9 953 aa6.51□□□□□ -1.37
BRCA1-212ENST00000473961 KCNMB2Q9Y691 235 aa6.51□□□□□ -1.37
BRCA1-212ENST00000473961 CES1P23141 567 aa6.5□□□□□ -1.37
BRCA1-212ENST00000473961 ST13P50502 369 aaKnown RBP6.5□□□□□ -1.37
BRCA1-212ENST00000473961 NRG1Q02297 640 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-212ENST00000473961 TAF1CQ15572 869 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-212ENST00000473961 TRIP4Q15650 581 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-212ENST00000473961 LDLRAD1Q5T700 205 aa6.5□□□□□ -1.37
BRCA1-212ENST00000473961 VPS37DQ86XT2 251 aa6.5□□□□□ -1.37
BRCA1-212ENST00000473961 MICALL1Q8N3F8 863 aa6.5□□□□□ -1.37
BRCA1-212ENST00000473961 SLC43A3Q8NBI5 491 aa6.5□□□□□ -1.37
BRCA1-212ENST00000473961 EFCC1Q9HA90 598 aa6.5□□□□□ -1.37
BRCA1-212ENST00000473961 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-212ENST00000473961 LOC105371045A0A1W2PR82 267 aa6.49□□□□□ -1.37
BRCA1-212ENST00000473961 EDN3P14138 238 aa6.49□□□□□ -1.37
BRCA1-212ENST00000473961 GSTT1P30711 240 aa6.49□□□□□ -1.37
BRCA1-212ENST00000473961 RAD51AP2Q09MP3 1159 aa6.49□□□□□ -1.37
BRCA1-212ENST00000473961 GALNT12Q8IXK2 581 aa6.49□□□□□ -1.37
BRCA1-212ENST00000473961 LENG1Q96BZ8 264 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-212ENST00000473961 TANGO6Q9C0B7 1094 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms