RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 CDC45O75419 566 aa13.11□□□□□ -0.31
SP140-208ENST00000473711 TAF5LO75529 589 aa13.11□□□□□ -0.31
SP140-208ENST00000473711 PDE8BO95263 885 aa13.11□□□□□ -0.31
SP140-208ENST00000473711 ADORA1P30542 326 aa13.11□□□□□ -0.31
SP140-208ENST00000473711 ATP2B3Q16720 1220 aa13.11□□□□□ -0.31
SP140-208ENST00000473711 VGLL2Q8N8G2 317 aa13.11□□□□□ -0.31
SP140-208ENST00000473711 RPGRQ92834 1020 aaKnown RBP13.11□□□□□ -0.31
SP140-208ENST00000473711 XAGE2Q96GT9 111 aa13.11□□□□□ -0.31
SP140-208ENST00000473711 PDGFDQ9GZP0 370 aaPredicted RBP13.11□□□□□ -0.31
SP140-208ENST00000473711 BSDC1Q9NW68 430 aaPredicted RBP13.11□□□□□ -0.31
SP140-208ENST00000473711 LAMB2P55268 1798 aa13.11□□□□□ -0.31
SP140-208ENST00000473711 ATP5JP18859 108 aa13.1□□□□□ -0.31
SP140-208ENST00000473711 CHRNDQ07001 517 aa13.1□□□□□ -0.31
SP140-208ENST00000473711 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
SP140-208ENST00000473711 TBC1D9Q6ZT07 1266 aa13.1□□□□□ -0.31
SP140-208ENST00000473711 RIC1Q4ADV7 1423 aa13.1□□□□□ -0.31
SP140-208ENST00000473711 SNAP23O00161 211 aa13.09□□□□□ -0.31
SP140-208ENST00000473711 ZNF609O15014 1411 aa13.09□□□□□ -0.31
SP140-208ENST00000473711 CNTROBQ8N137 903 aa13.09□□□□□ -0.31
SP140-208ENST00000473711 RBM17Q96I25 401 aaKnown RBP13.09□□□□□ -0.31
SP140-208ENST00000473711 MINPP1Q9UNW1 487 aa13.09□□□□□ -0.31
SP140-208ENST00000473711 FGFR2P21802 821 aa13.08□□□□□ -0.32
SP140-208ENST00000473711 MFAP1P55081 439 aaKnown RBP13.08□□□□□ -0.32
SP140-208ENST00000473711 GRAPQ13588 217 aa13.08□□□□□ -0.32
SP140-208ENST00000473711 PUM3Q15397 648 aaKnown RBP13.08□□□□□ -0.32
SP140-208ENST00000473711 CRY2Q49AN0 593 aa13.08□□□□□ -0.32
SP140-208ENST00000473711 CCDC158Q5M9N0 1113 aa13.08□□□□□ -0.32
SP140-208ENST00000473711 TTC39AQ5SRH9 613 aa13.08□□□□□ -0.32
SP140-208ENST00000473711 GRAPLQ8TC17 118 aaPredicted RBP13.08□□□□□ -0.32
SP140-208ENST00000473711 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.32
SP140-208ENST00000473711 BRIP1Q9BX63 1249 aa13.08□□□□□ -0.32
SP140-208ENST00000473711 COL4A1P02462 1669 aa13.08□□□□□ -0.32
SP140-208ENST00000473711 KLRG2A4D1S0 409 aaPredicted RBP13.07□□□□□ -0.32
SP140-208ENST00000473711 SLC5A1P13866 664 aa13.07□□□□□ -0.32
SP140-208ENST00000473711 CASC1Q6TDU7 716 aa13.07□□□□□ -0.32
SP140-208ENST00000473711 LPIN2Q92539 896 aa13.07□□□□□ -0.32
SP140-208ENST00000473711 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
SP140-208ENST00000473711 OTUD5Q96G74 571 aa13.07□□□□□ -0.32
SP140-208ENST00000473711 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
SP140-208ENST00000473711 IFIT1P09914 478 aaKnown RBP13.06□□□□□ -0.32
SP140-208ENST00000473711 CHMLP26374 656 aa13.06□□□□□ -0.32
SP140-208ENST00000473711 HOXA10P31260 410 aaPredicted RBP13.06□□□□□ -0.32
SP140-208ENST00000473711 PDE6BP35913 854 aa13.06□□□□□ -0.32
SP140-208ENST00000473711 SLC16A10Q8TF71 515 aa13.06□□□□□ -0.32
SP140-208ENST00000473711 EDC3Q96F86 508 aaKnown RBP13.06□□□□□ -0.32
SP140-208ENST00000473711 DNAJC2Q99543 621 aaKnown RBP13.06□□□□□ -0.32
SP140-208ENST00000473711 HAUS7Q99871 368 aa13.06□□□□□ -0.32
SP140-208ENST00000473711 PCDHB8Q9UN66 801 aa13.06□□□□□ -0.32
SP140-208ENST00000473711 NDUFB9Q9Y6M9 179 aa13.06□□□□□ -0.32
SP140-208ENST00000473711 TAF1P21675 1872 aa13.06□□□□□ -0.32
SP140-208ENST00000473711 WTIPA6NIX2 430 aaPredicted RBP13.05□□□□□ -0.32
SP140-208ENST00000473711 IER5LQ5T953 404 aa13.05□□□□□ -0.32
SP140-208ENST00000473711 CRAMP1Q96RY5 1269 aa13.05□□□□□ -0.32
SP140-208ENST00000473711 ANKRD2Q9GZV1 360 aa13.05□□□□□ -0.32
SP140-208ENST00000473711 BBOX1O75936 387 aa13.04□□□□□ -0.32
SP140-208ENST00000473711 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
SP140-208ENST00000473711 NPR1P16066 1061 aa13.04□□□□□ -0.32
SP140-208ENST00000473711 PHKA1P46020 1223 aa13.04□□□□□ -0.32
SP140-208ENST00000473711 KCNJ4P48050 445 aa13.04□□□□□ -0.32
SP140-208ENST00000473711 UBE4AQ14139 1066 aa13.04□□□□□ -0.32
SP140-208ENST00000473711 CCDC102BQ68D86 513 aa13.04□□□□□ -0.32
SP140-208ENST00000473711 SLC51AQ86UW1 340 aa13.04□□□□□ -0.32
SP140-208ENST00000473711 C2CD5Q86YS7 1000 aa13.04□□□□□ -0.32
SP140-208ENST00000473711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.04□□□□□ -0.32
SP140-208ENST00000473711 UPF2Q9HAU5 1272 aaKnown RBP13.04□□□□□ -0.32
SP140-208ENST00000473711 SNRKQ9NRH2 765 aa13.04□□□□□ -0.32
SP140-208ENST00000473711 CIZ1Q9ULV3 898 aaPredicted RBP13.04□□□□□ -0.32
SP140-208ENST00000473711 QSER1Q2KHR3 1735 aa13.04□□□□□ -0.32
SP140-208ENST00000473711 SPEF2Q9C093 1822 aa13.04□□□□□ -0.32
SP140-208ENST00000473711 CASZ1Q86V15 1759 aa13.03□□□□□ -0.32
SP140-208ENST00000473711 GOLIM4O00461 696 aa13.03□□□□□ -0.32
SP140-208ENST00000473711 ZBTB7AO95365 584 aa13.03□□□□□ -0.32
SP140-208ENST00000473711 SRGNP10124 158 aa13.03□□□□□ -0.32
SP140-208ENST00000473711 BCAMP50895 628 aa13.03□□□□□ -0.32
SP140-208ENST00000473711 FKBP4Q02790 459 aaKnown RBP eCLIP13.03□□□□□ -0.32
SP140-208ENST00000473711 SCARF1Q14162 830 aa13.03□□□□□ -0.32
SP140-208ENST00000473711 R3HDM1Q15032 1099 aaKnown RBP13.03□□□□□ -0.32
SP140-208ENST00000473711 ZNF467Q7Z7K2 595 aaPredicted RBP13.03□□□□□ -0.32
SP140-208ENST00000473711 ZNF622Q969S3 477 aaKnown RBP eCLIP13.03□□□□□ -0.32
SP140-208ENST00000473711 FSD1Q9BTV5 496 aa13.03□□□□□ -0.32
SP140-208ENST00000473711 NRXN2Q9P2S2 1712 aa13.02□□□□□ -0.32
SP140-208ENST00000473711 H0YIN7 160 aa13.02□□□□□ -0.33
SP140-208ENST00000473711 UQCRFS1P1P0C7P4 283 aa13.02□□□□□ -0.33
SP140-208ENST00000473711 ZAP70P43403 619 aa13.02□□□□□ -0.33
SP140-208ENST00000473711 MAMSTRQ6ZN01 415 aa13.02□□□□□ -0.33
SP140-208ENST00000473711 MASTLQ96GX5 879 aa13.02□□□□□ -0.33
SP140-208ENST00000473711 ZNF512BQ96KM6 892 aaPredicted RBP13.02□□□□□ -0.33
SP140-208ENST00000473711 ESYT1Q9BSJ8 1104 aa13.02□□□□□ -0.33
SP140-208ENST00000473711 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.33
SP140-208ENST00000473711 PAG1Q9NWQ8 432 aa13.02□□□□□ -0.33
SP140-208ENST00000473711 ANKIB1Q9P2G1 1089 aa13.02□□□□□ -0.33
SP140-208ENST00000473711 POTEFA5A3E0 1075 aa13.01□□□□□ -0.33
SP140-208ENST00000473711 PPEF1O14829 653 aaPredicted RBP13.01□□□□□ -0.33
SP140-208ENST00000473711 EIF5BO60841 1220 aaKnown RBP13.01□□□□□ -0.33
SP140-208ENST00000473711 CHRNA5P30532 468 aa13.01□□□□□ -0.33
SP140-208ENST00000473711 ALDH1B1P30837 517 aa13.01□□□□□ -0.33
SP140-208ENST00000473711 MCAMP43121 646 aa13.01□□□□□ -0.33
SP140-208ENST00000473711 GYG1P46976 350 aa13.01□□□□□ -0.33
SP140-208ENST00000473711 GPSM2P81274 684 aa13.01□□□□□ -0.33
SP140-208ENST00000473711 IFFO2Q5TF58 517 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms