RNA–Protein interactions for RNA: ENST00000473515.5

SCML4-209, Transcript of Scm polycomb group protein like 4, human

TSL 2

Gene SCML4, Length 4,297 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCML4-209	ENST00000473515	PDLIM2	Q96JY6	352 aa		10.91	□□□□□ -0.66
SCML4-209	ENST00000473515	SLC4A4	Q9Y6R1	1079 aa		10.91	□□□□□ -0.66
SCML4-209	ENST00000473515	PPL	O60437	1756 aa		10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	ZC3H13	Q5T200	1668 aa	Known RBP	10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	CFAP100	Q494V2	611 aa		10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	CCAR1	Q8IX12	1150 aa	Known RBP	10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	CCDC43	Q96MW1	224 aa	Known RBP	10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	NLRP3	Q96P20	1036 aa		10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	SETDB2	Q96T68	719 aa		10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	CYP2E1	P05181	493 aa	Predicted RBP	10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	SSB	P05455	408 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	DHX8	Q14562	1220 aa	Known RBP	10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	FILIP1L	Q4L180	1135 aa		10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	CCDC24	Q8N4L8	307 aa		10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	ZHX3	Q9H4I2	956 aa		10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	COL3A1	P02461	1466 aa	Predicted RBP	10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	LRRC7	Q96NW7	1537 aa		10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	TSPY2	A6NKD2	308 aa		10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	SLC27A2	O14975	620 aa		10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	SFPQ	P23246	707 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	ERBB3	P21860	1342 aa		10.9	□□□□□ -0.66
SCML4-209	ENST00000473515	MROH1	Q8NDA8	1641 aa		10.9	□□□□□ -0.67
SCML4-209	ENST00000473515	MPHOSPH10	O00566	681 aa	Known RBP	10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	ZBTB43	O43298	467 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	PNPLA6	Q8IY17	1366 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	DHX32	Q7L7V1	743 aa	Known RBP	10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	NPHP4	O75161	1426 aa	Predicted RBP	10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	TAF5L	O75529	589 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	HSPA4	P34932	840 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	NAP1L1	P55209	391 aa	Known RBP	10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	MAGEB6	Q8N7X4	407 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	XAGE2	Q96GT9	111 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	STX8	Q9UNK0	236 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	LMTK3	Q96Q04	1460 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515		A0A0U1RQG5	324 aa	Predicted RBP	10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	PTH1R	Q03431	593 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	GPS2	Q13227	327 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	CATIP	Q7Z7H3	387 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	SEC62	Q99442	399 aa	Known RBP	10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	ALG1	Q9BT22	464 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	NCOA5	Q9HCD5	579 aa	Known RBP	10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	AXIN2	Q9Y2T1	843 aa		10.89	□□□□□ -0.67
SCML4-209	ENST00000473515	MARCKS	P29966	332 aa	Predicted RBP	10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	WTAP	Q15007	396 aa		10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	KIF18A	Q8NI77	898 aa		10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	PTPDC1	A2A3K4	754 aa		10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	IGSF3	O75054	1194 aa		10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	KRT18	P05783	430 aa	Known RBP	10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
SCML4-209	ENST00000473515		V9GYY5	206 aa	Predicted RBP	10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	KIDINS220	Q9ULH0	1771 aa		10.88	□□□□□ -0.67
SCML4-209	ENST00000473515		A0A0D9SFI3	127 aa		10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	ERICH4	A6NGS2	130 aa		10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	KBTBD3	Q8NAB2	608 aa		10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	CNNM3	Q8NE01	707 aa		10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	VAT1L	Q9HCJ6	419 aa		10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	SH3TC1	Q8TE82	1336 aa		10.88	□□□□□ -0.67
SCML4-209	ENST00000473515	AOX1	Q06278	1338 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	SMARCC1	Q92922	1105 aa	Predicted RBP	10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	ZKSCAN3	Q9BRR0	538 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	NLRP5	P59047	1200 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	STX1A	Q16623	288 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	NAA16	Q6N069	864 aa	Predicted RBP	10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	TLR7	Q9NYK1	1049 aa	Known RBP	10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	DIP2C	Q9Y2E4	1556 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	KDR	P35968	1356 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	TMC6	Q7Z403	805 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	ASAP1	Q9ULH1	1129 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	CTAGE5	O15320	804 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	RPS6KB1	P23443	525 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	RASEF	Q8IZ41	740 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	CEP89	Q96ST8	783 aa		10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.87	□□□□□ -0.67
SCML4-209	ENST00000473515	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	EPS15	P42566	896 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	FAM98C	Q17RN3	349 aa	Known RBP	10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	LRRC24	Q50LG9	513 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	UBXN4	Q92575	508 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	AK9	Q5TCS8	1911 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515		F8W031	263 aa	Predicted RBP	10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	MBD4	O95243	580 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	SKIL	P12757	684 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	ZAP70	P43403	619 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	HSP90AA4P	Q58FG1	418 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	PPFIBP1	Q86W92	1011 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	DACH1	Q9UI36	760 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	CEP131	Q9UPN4	1083 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	SMTNL1	A8MU46	457 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	URI1	O94763	535 aa	Predicted RBP	10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	CEP135	Q66GS9	1140 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	TMX1	Q9H3N1	280 aa		10.86	□□□□□ -0.67
SCML4-209	ENST00000473515	GNPAT	O15228	680 aa		10.85	□□□□□ -0.67
SCML4-209	ENST00000473515	TCIRG1	Q13488	830 aa		10.85	□□□□□ -0.67
SCML4-209	ENST00000473515	OTUD7B	Q6GQQ9	843 aa		10.85	□□□□□ -0.67
SCML4-209	ENST00000473515	PTPRM	P28827	1452 aa		10.85	□□□□□ -0.67

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