RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 HELQQ8TDG4 1101 aa11.35□□□□□ -0.59
A1CF-209ENST00000473480 MDFIQ99750 246 aa11.35□□□□□ -0.59
A1CF-209ENST00000473480 NUP153P49790 1475 aaKnown RBP11.35□□□□□ -0.59
A1CF-209ENST00000473480 MLH3Q9UHC1 1453 aa11.34□□□□□ -0.59
A1CF-209ENST00000473480 JCADQ9P266 1359 aa11.34□□□□□ -0.59
A1CF-209ENST00000473480 PHF20L1A8MW92 1017 aa11.34□□□□□ -0.59
A1CF-209ENST00000473480 NFKB1P19838 968 aa11.34□□□□□ -0.59
A1CF-209ENST00000473480 KCNMA1Q12791 1236 aa11.34□□□□□ -0.59
A1CF-209ENST00000473480 FAM26DQ5JW98 314 aa11.34□□□□□ -0.59
A1CF-209ENST00000473480 NPHP4O75161 1426 aaPredicted RBP11.34□□□□□ -0.59
A1CF-209ENST00000473480 STRCP1A6NGW2 1772 aa11.33□□□□□ -0.59
A1CF-209ENST00000473480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.33□□□□□ -0.6
A1CF-209ENST00000473480 CMTR1Q8N1G2 835 aaKnown RBP11.33□□□□□ -0.6
A1CF-209ENST00000473480 GTF3C2Q8WUA4 911 aaPredicted RBP11.33□□□□□ -0.6
A1CF-209ENST00000473480 MKL2Q9ULH7 1088 aa11.33□□□□□ -0.6
A1CF-209ENST00000473480 USP20Q9Y2K6 914 aa11.33□□□□□ -0.6
A1CF-209ENST00000473480 CNTNAP5Q8WYK1 1306 aa11.33□□□□□ -0.6
A1CF-209ENST00000473480 EGFRP00533 1210 aa11.32□□□□□ -0.6
A1CF-209ENST00000473480 ADH7P40394 386 aa11.32□□□□□ -0.6
A1CF-209ENST00000473480 ZAP70P43403 619 aa11.32□□□□□ -0.6
A1CF-209ENST00000473480 SNRPNP63162 240 aaKnown RBP11.32□□□□□ -0.6
A1CF-209ENST00000473480 PIK3R5Q8WYR1 880 aa11.32□□□□□ -0.6
A1CF-209ENST00000473480 MED14O60244 1454 aa11.32□□□□□ -0.6
A1CF-209ENST00000473480 CDK13Q14004 1512 aaKnown RBP11.31□□□□□ -0.6
A1CF-209ENST00000473480 CLTCQ00610 1675 aaKnown RBP11.31□□□□□ -0.6
A1CF-209ENST00000473480 XYLBO75191 536 aa11.31□□□□□ -0.6
A1CF-209ENST00000473480 MAP3K6O95382 1288 aa11.31□□□□□ -0.6
A1CF-209ENST00000473480 KANK3Q6NY19 840 aa11.31□□□□□ -0.6
A1CF-209ENST00000473480 THEMISQ8N1K5 641 aaPredicted RBP11.31□□□□□ -0.6
A1CF-209ENST00000473480 UBE2OQ9C0C9 1292 aaKnown RBP11.31□□□□□ -0.6
A1CF-209ENST00000473480 PIK3R2O00459 728 aa11.3□□□□□ -0.6
A1CF-209ENST00000473480 SASH3O75995 380 aa11.3□□□□□ -0.6
A1CF-209ENST00000473480 HOXB4P17483 251 aaPredicted RBP11.3□□□□□ -0.6
A1CF-209ENST00000473480 YY1P25490 414 aa11.3□□□□□ -0.6
A1CF-209ENST00000473480 IRS1P35568 1242 aa11.3□□□□□ -0.6
A1CF-209ENST00000473480 DGKGP49619 791 aa11.3□□□□□ -0.6
A1CF-209ENST00000473480 KRT25Q7Z3Z0 450 aa11.3□□□□□ -0.6
A1CF-209ENST00000473480 IGFLR1Q9H665 355 aa11.3□□□□□ -0.6
A1CF-209ENST00000473480 KCNMB2Q9Y691 235 aa11.3□□□□□ -0.6
A1CF-209ENST00000473480 ZBTB39O15060 712 aa11.29□□□□□ -0.6
A1CF-209ENST00000473480 RARAP10276 462 aa11.29□□□□□ -0.6
A1CF-209ENST00000473480 TARSP26639 723 aaKnown RBP11.29□□□□□ -0.6
A1CF-209ENST00000473480 TBC1D8BQ0IIM8 1120 aa11.29□□□□□ -0.6
A1CF-209ENST00000473480 ROBO1Q9Y6N7 1651 aa11.29□□□□□ -0.6
A1CF-209ENST00000473480 SPATA31A6Q5VVP1 1343 aa11.29□□□□□ -0.6
A1CF-209ENST00000473480 DEPDC5O75140 1603 aa11.28□□□□□ -0.6
A1CF-209ENST00000473480 IQGAP1P46940 1657 aa11.28□□□□□ -0.6
A1CF-209ENST00000473480 PCSK7Q16549 785 aa11.28□□□□□ -0.6
A1CF-209ENST00000473480 ZFATQ9P243 1243 aa11.28□□□□□ -0.6
A1CF-209ENST00000473480 MYO5CQ9NQX4 1742 aa11.27□□□□□ -0.61
A1CF-209ENST00000473480 ARID4AP29374 1257 aaPredicted RBP11.27□□□□□ -0.61
A1CF-209ENST00000473480 RASSF7Q02833 373 aa11.27□□□□□ -0.61
A1CF-209ENST00000473480 LINC00114Q6XXX2 140 aa11.27□□□□□ -0.61
A1CF-209ENST00000473480 GPR152Q8TDT2 470 aa11.27□□□□□ -0.61
A1CF-209ENST00000473480 DNAJB12Q9NXW2 375 aaKnown RBP11.27□□□□□ -0.61
A1CF-209ENST00000473480 SLC6A14Q9UN76 642 aa11.27□□□□□ -0.61
A1CF-209ENST00000473480 FNDC3AQ9Y2H6 1198 aaKnown RBP11.27□□□□□ -0.61
A1CF-209ENST00000473480 GNB5O14775 395 aa11.26□□□□□ -0.61
A1CF-209ENST00000473480 GSK3AP49840 483 aa11.26□□□□□ -0.61
A1CF-209ENST00000473480 SF3B2Q13435 895 aaKnown RBP11.26□□□□□ -0.61
A1CF-209ENST00000473480 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
A1CF-209ENST00000473480 DHX32Q7L7V1 743 aaKnown RBP11.26□□□□□ -0.61
A1CF-209ENST00000473480 ABCC1P33527 1531 aa11.25□□□□□ -0.61
A1CF-209ENST00000473480 LRP5O75197 1615 aa11.25□□□□□ -0.61
A1CF-209ENST00000473480 LRP6O75581 1613 aa11.25□□□□□ -0.61
A1CF-209ENST00000473480 ABL1P00519 1130 aa11.25□□□□□ -0.61
A1CF-209ENST00000473480 MPSTP25325 297 aa11.25□□□□□ -0.61
A1CF-209ENST00000473480 MTMR3Q13615 1198 aa11.25□□□□□ -0.61
A1CF-209ENST00000473480 TRIP4Q15650 581 aaPredicted RBP11.25□□□□□ -0.61
A1CF-209ENST00000473480 STARD13Q9Y3M8 1113 aa11.25□□□□□ -0.61
A1CF-209ENST00000473480 PHLPP1O60346 1717 aa11.25□□□□□ -0.61
A1CF-209ENST00000473480 ALKBH2Q6NS38 261 aa11.24□□□□□ -0.61
A1CF-209ENST00000473480 NLRP13Q86W25 1043 aa11.24□□□□□ -0.61
A1CF-209ENST00000473480 TMEM151AQ8N4L1 468 aa11.24□□□□□ -0.61
A1CF-209ENST00000473480 RGS12O14924 1447 aa11.24□□□□□ -0.61
A1CF-209ENST00000473480 XIRP1Q702N8 1843 aaKnown RBP11.23□□□□□ -0.61
A1CF-209ENST00000473480 M0R082 166 aa11.23□□□□□ -0.61
A1CF-209ENST00000473480 FAM13AO94988 1023 aa11.23□□□□□ -0.61
A1CF-209ENST00000473480 GDF11O95390 407 aa11.23□□□□□ -0.61
A1CF-209ENST00000473480 RPLP1P05386 114 aaKnown RBP11.23□□□□□ -0.61
A1CF-209ENST00000473480 NPR3P17342 541 aa11.23□□□□□ -0.61
A1CF-209ENST00000473480 EIF1AXP47813 144 aaKnown RBP11.23□□□□□ -0.61
A1CF-209ENST00000473480 RBM6P78332 1123 aaKnown RBP11.23□□□□□ -0.61
A1CF-209ENST00000473480 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
A1CF-209ENST00000473480 GGT6Q6P531 493 aa11.23□□□□□ -0.61
A1CF-209ENST00000473480 ATCAYQ86WG3 371 aa11.23□□□□□ -0.61
A1CF-209ENST00000473480 ZNF417Q8TAU3 575 aa11.23□□□□□ -0.61
A1CF-209ENST00000473480 TRPM4Q8TD43 1214 aa11.23□□□□□ -0.61
A1CF-209ENST00000473480 ZNF587Q96SQ5 575 aaPredicted RBP11.23□□□□□ -0.61
A1CF-209ENST00000473480 TLR7Q9NYK1 1049 aaKnown RBP11.23□□□□□ -0.61
A1CF-209ENST00000473480 ARHGAP5Q13017 1502 aa11.23□□□□□ -0.61
A1CF-209ENST00000473480 ITSN2Q9NZM3 1697 aa11.23□□□□□ -0.61
A1CF-209ENST00000473480 ALBP02768 609 aa11.22□□□□□ -0.61
A1CF-209ENST00000473480 PCSK2P16519 638 aa11.22□□□□□ -0.61
A1CF-209ENST00000473480 MICALL1Q8N3F8 863 aa11.22□□□□□ -0.61
A1CF-209ENST00000473480 TNRQ92752 1358 aa11.22□□□□□ -0.61
A1CF-209ENST00000473480 KDM5DQ9BY66 1539 aa11.22□□□□□ -0.61
A1CF-209ENST00000473480 PRDM6Q9NQX0 595 aa11.22□□□□□ -0.61
A1CF-209ENST00000473480 FAM135AQ9P2D6 1515 aa11.22□□□□□ -0.61
A1CF-209ENST00000473480 EGFL7Q9UHF1 273 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms