RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SRCIN1Q9C0H9 1055 aa22.79■■□□□ 1.24
SNX4-204ENST00000473417 LEMD3Q9Y2U8 911 aa22.79■■□□□ 1.24
SNX4-204ENST00000473417 CTCFP49711 727 aaPredicted RBP22.78■■□□□ 1.24
SNX4-204ENST00000473417 ZNF280AP59817 542 aaPredicted RBP22.78■■□□□ 1.24
SNX4-204ENST00000473417 SAPCD2Q86UD0 394 aa22.78■■□□□ 1.24
SNX4-204ENST00000473417 CAPNS2Q96L46 248 aa22.78■■□□□ 1.24
SNX4-204ENST00000473417 GMLQ99445 158 aa22.78■■□□□ 1.24
SNX4-204ENST00000473417 MPHOSPH8Q99549 860 aa22.78■■□□□ 1.24
SNX4-204ENST00000473417 ANKRD2Q9GZV1 360 aa22.78■■□□□ 1.24
SNX4-204ENST00000473417 PRDM10Q9NQV6 1147 aa22.78■■□□□ 1.24
SNX4-204ENST00000473417 ANKRD18BA2A2Z9 1011 aa22.77■■□□□ 1.24
SNX4-204ENST00000473417 USP17L3A6NCW0 530 aa22.77■■□□□ 1.24
SNX4-204ENST00000473417 USP17L4A6NCW7 530 aa22.77■■□□□ 1.24
SNX4-204ENST00000473417 GRM8O00222 908 aa22.77■■□□□ 1.24
SNX4-204ENST00000473417 ALDH1L1O75891 902 aa22.77■■□□□ 1.24
SNX4-204ENST00000473417 ECE1P42892 770 aa22.77■■□□□ 1.24
SNX4-204ENST00000473417 MAP2K1Q02750 393 aaPredicted RBP22.77■■□□□ 1.24
SNX4-204ENST00000473417 CYP4F22Q6NT55 531 aa22.77■■□□□ 1.24
SNX4-204ENST00000473417 USP17L1Q7RTZ2 530 aa22.77■■□□□ 1.24
SNX4-204ENST00000473417 ECM29Q5VYK3 1845 aa22.77■■□□□ 1.24
SNX4-204ENST00000473417 ZNF804BA4D1E1 1349 aa22.77■■□□□ 1.24
SNX4-204ENST00000473417 RBM26Q5T8P6 1007 aaKnown RBP22.76■■□□□ 1.23
SNX4-204ENST00000473417 USP48Q86UV5 1035 aa22.76■■□□□ 1.23
SNX4-204ENST00000473417 TXNRD3Q86VQ6 643 aa22.76■■□□□ 1.23
SNX4-204ENST00000473417 HHIPL1Q96JK4 782 aa22.76■■□□□ 1.23
SNX4-204ENST00000473417 ZNF408Q9H9D4 720 aa22.76■■□□□ 1.23
SNX4-204ENST00000473417 CHRNDQ07001 517 aa22.75■■□□□ 1.23
SNX4-204ENST00000473417 PAXIP1Q6ZW49 1069 aaPredicted RBP22.75■■□□□ 1.23
SNX4-204ENST00000473417 KRT26Q7Z3Y9 468 aa22.75■■□□□ 1.23
SNX4-204ENST00000473417 FRAT1Q92837 279 aaPredicted RBP22.75■■□□□ 1.23
SNX4-204ENST00000473417 API5Q9BZZ5 524 aaKnown RBP22.75■■□□□ 1.23
SNX4-204ENST00000473417 COA1Q9GZY4 146 aa22.75■■□□□ 1.23
SNX4-204ENST00000473417 KIF16BQ96L93 1317 aa22.75■■□□□ 1.23
SNX4-204ENST00000473417 IFIT5Q13325 482 aaKnown RBP22.74■■□□□ 1.23
SNX4-204ENST00000473417 EPHA10Q5JZY3 1008 aa22.74■■□□□ 1.23
SNX4-204ENST00000473417 DCPSQ96C86 337 aaKnown RBP22.74■■□□□ 1.23
SNX4-204ENST00000473417 GGA3Q9NZ52 723 aa22.74■■□□□ 1.23
SNX4-204ENST00000473417 C9orf78Q9NZ63 289 aaPredicted RBP22.74■■□□□ 1.23
SNX4-204ENST00000473417 CAPN15O75808 1086 aa22.73■■□□□ 1.23
SNX4-204ENST00000473417 USP17L8P0C7I0 530 aa22.73■■□□□ 1.23
SNX4-204ENST00000473417 KLRK1P26718 216 aa22.73■■□□□ 1.23
SNX4-204ENST00000473417 DACT2Q5SW24 774 aa22.73■■□□□ 1.23
SNX4-204ENST00000473417 LMBR1LQ6UX01 489 aa22.73■■□□□ 1.23
SNX4-204ENST00000473417 DLK2Q6UY11 383 aa22.73■■□□□ 1.23
SNX4-204ENST00000473417 ASTN2O75129 1339 aaPredicted RBP22.73■■□□□ 1.23
SNX4-204ENST00000473417 ARAP2Q8WZ64 1704 aa22.72■■□□□ 1.23
SNX4-204ENST00000473417 ADM5C9JUS6 153 aa22.72■■□□□ 1.23
SNX4-204ENST00000473417 ARHGAP45Q92619 1136 aa22.72■■□□□ 1.23
SNX4-204ENST00000473417 MYOZ2Q9NPC6 264 aa22.72■■□□□ 1.23
SNX4-204ENST00000473417 CHMP3Q9Y3E7 222 aa22.72■■□□□ 1.23
SNX4-204ENST00000473417 MYO3BQ8WXR4 1341 aa22.72■■□□□ 1.23
SNX4-204ENST00000473417 IRS2Q9Y4H2 1338 aa22.72■■□□□ 1.23
SNX4-204ENST00000473417 IPO8O15397 1037 aaKnown RBP22.71■■□□□ 1.23
SNX4-204ENST00000473417 GRM1Q13255 1194 aa22.71■■□□□ 1.23
SNX4-204ENST00000473417 STRIP1Q5VSL9 837 aa22.71■■□□□ 1.23
SNX4-204ENST00000473417 KCNJ4P48050 445 aa22.7■■□□□ 1.22
SNX4-204ENST00000473417 LBX1P52954 281 aa22.7■■□□□ 1.22
SNX4-204ENST00000473417 UTYO14607 1347 aa22.7■■□□□ 1.22
SNX4-204ENST00000473417 PAPPA2Q9BXP8 1791 aa22.7■■□□□ 1.22
SNX4-204ENST00000473417 PITPNM2Q9BZ72 1349 aa22.69■■□□□ 1.22
SNX4-204ENST00000473417 NBPF7P0C2Y1 421 aaPredicted RBP22.69■■□□□ 1.22
SNX4-204ENST00000473417 MAP2K2P36507 400 aa22.69■■□□□ 1.22
SNX4-204ENST00000473417 SCARF1Q14162 830 aa22.69■■□□□ 1.22
SNX4-204ENST00000473417 CCDC57Q2TAC2 916 aa22.69■■□□□ 1.22
SNX4-204ENST00000473417 C15orf52Q6ZUT6 534 aaKnown RBP22.69■■□□□ 1.22
SNX4-204ENST00000473417 SULF1Q8IWU6 871 aa22.69■■□□□ 1.22
SNX4-204ENST00000473417 MXD3Q9BW11 206 aa22.69■■□□□ 1.22
SNX4-204ENST00000473417 TNNQ9UQP3 1299 aa22.69■■□□□ 1.22
SNX4-204ENST00000473417 AOC2O75106 756 aa22.68■■□□□ 1.22
SNX4-204ENST00000473417 TAF5LO75529 589 aa22.68■■□□□ 1.22
SNX4-204ENST00000473417 HSPA8P11142 646 aaKnown RBP22.68■■□□□ 1.22
SNX4-204ENST00000473417 TRIM27P14373 513 aa22.68■■□□□ 1.22
SNX4-204ENST00000473417 ANGEL2Q5VTE6 544 aaKnown RBP22.68■■□□□ 1.22
SNX4-204ENST00000473417 ZKSCAN2Q63HK3 967 aa22.68■■□□□ 1.22
SNX4-204ENST00000473417 ATF7IPQ6VMQ6 1270 aa22.68■■□□□ 1.22
SNX4-204ENST00000473417 KAZALD1Q96I82 304 aa22.68■■□□□ 1.22
SNX4-204ENST00000473417 SUCLG2Q96I99 432 aa22.68■■□□□ 1.22
SNX4-204ENST00000473417 SNAP23O00161 211 aa22.67■■□□□ 1.22
SNX4-204ENST00000473417 HUNKP57058 714 aa22.67■■□□□ 1.22
SNX4-204ENST00000473417 HELBQ8NG08 1087 aaPredicted RBP22.67■■□□□ 1.22
SNX4-204ENST00000473417 FBXW7Q969H0 707 aa22.67■■□□□ 1.22
SNX4-204ENST00000473417 CLUAP1Q96AJ1 413 aa22.67■■□□□ 1.22
SNX4-204ENST00000473417 ZNF594Q96JF6 807 aaPredicted RBP22.67■■□□□ 1.22
SNX4-204ENST00000473417 BEGAINQ9BUH8 593 aa22.67■■□□□ 1.22
SNX4-204ENST00000473417 GBA2Q9HCG7 927 aaPredicted RBP22.67■■□□□ 1.22
SNX4-204ENST00000473417 TAF7LQ5H9L4 462 aa22.66■■□□□ 1.22
SNX4-204ENST00000473417 TTLL5Q6EMB2 1281 aa22.66■■□□□ 1.22
SNX4-204ENST00000473417 LDHAL6AQ6ZMR3 332 aa22.66■■□□□ 1.22
SNX4-204ENST00000473417 CDCA5Q96FF9 252 aa22.66■■□□□ 1.22
SNX4-204ENST00000473417 USP44Q9H0E7 712 aa22.66■■□□□ 1.22
SNX4-204ENST00000473417 CD209Q9NNX6 404 aa22.66■■□□□ 1.22
SNX4-204ENST00000473417 AKAP11Q9UKA4 1901 aa22.66■■□□□ 1.22
SNX4-204ENST00000473417 MMP14P50281 582 aa22.65■■□□□ 1.22
SNX4-204ENST00000473417 OGFOD1Q8N543 542 aa22.65■■□□□ 1.22
SNX4-204ENST00000473417 C2orf69Q8N8R5 385 aa22.65■■□□□ 1.22
SNX4-204ENST00000473417 GTF2IP78347 998 aa22.64■■□□□ 1.21
SNX4-204ENST00000473417 CNNM1Q9NRU3 951 aa22.64■■□□□ 1.21
SNX4-204ENST00000473417 RCAN3Q9UKA8 241 aa22.64■■□□□ 1.21
SNX4-204ENST00000473417 MYH13Q9UKX3 1938 aa22.63■■□□□ 1.21
SNX4-204ENST00000473417 NBPF9Q3BBW0 867 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms