RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 ZNF157P51786 506 aaPredicted RBP8.99□□□□□ -0.97
CKS1B-205ENST00000473344 RTL5Q5HYW3 569 aaPredicted RBP8.99□□□□□ -0.97
CKS1B-205ENST00000473344 RGMBQ6NW40 437 aa8.99□□□□□ -0.97
CKS1B-205ENST00000473344 EFCAB3Q8N7B9 438 aa8.99□□□□□ -0.97
CKS1B-205ENST00000473344 PLBD2Q8NHP8 589 aa8.99□□□□□ -0.97
CKS1B-205ENST00000473344 CELF1Q92879 486 aaKnown RBP8.99□□□□□ -0.97
CKS1B-205ENST00000473344 CCDC102AQ96A19 550 aa8.99□□□□□ -0.97
CKS1B-205ENST00000473344 ZC3H12CQ9C0D7 883 aaKnown RBP8.99□□□□□ -0.97
CKS1B-205ENST00000473344 TRPM7Q96QT4 1865 aa8.98□□□□□ -0.97
CKS1B-205ENST00000473344 ATP5J2-PTCD1G3V325 749 aa8.98□□□□□ -0.97
CKS1B-205ENST00000473344 ECE2O60344 883 aa8.98□□□□□ -0.97
CKS1B-205ENST00000473344 HSP90B1P14625 803 aaKnown RBP8.98□□□□□ -0.97
CKS1B-205ENST00000473344 GPSM2P81274 684 aa8.98□□□□□ -0.97
CKS1B-205ENST00000473344 WDR43Q15061 677 aaKnown RBP eCLIP8.98□□□□□ -0.97
CKS1B-205ENST00000473344 RALBP1Q15311 655 aa8.98□□□□□ -0.97
CKS1B-205ENST00000473344 SF3B3Q15393 1217 aaKnown RBP8.98□□□□□ -0.97
CKS1B-205ENST00000473344 KRT24Q2M2I5 525 aa8.98□□□□□ -0.97
CKS1B-205ENST00000473344 SULF1Q8IWU6 871 aa8.98□□□□□ -0.97
CKS1B-205ENST00000473344 CCDC146Q8IYE0 955 aa8.98□□□□□ -0.97
CKS1B-205ENST00000473344 GBA2Q9HCG7 927 aaPredicted RBP8.98□□□□□ -0.97
CKS1B-205ENST00000473344 ZSWIM6Q9HCJ5 1215 aa8.98□□□□□ -0.97
CKS1B-205ENST00000473344 TAOK2Q9UL54 1235 aa8.98□□□□□ -0.97
CKS1B-205ENST00000473344 ADM5C9JUS6 153 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 CHL1O00533 1208 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 IRS4O14654 1257 aaPredicted RBP8.97□□□□□ -0.97
CKS1B-205ENST00000473344 RIOK3O14730 519 aaKnown RBP8.97□□□□□ -0.97
CKS1B-205ENST00000473344 HOXB7P09629 217 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 RPS8P62241 208 aaKnown RBP8.97□□□□□ -0.97
CKS1B-205ENST00000473344 KIF4BQ2VIQ3 1234 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 DLK2Q6UY11 383 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 RIC3Q7Z5B4 369 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 TBC1D16Q8TBP0 767 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 ISCA1Q9BUE6 129 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 KRTAP3-3Q9BYR6 98 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 KRTAP3-2Q9BYR7 98 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 HYPKQ9NX55 129 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 SAGE1Q9NXZ1 904 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 ANKIB1Q9P2G1 1089 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 POLLQ9UGP5 575 aa8.97□□□□□ -0.97
CKS1B-205ENST00000473344 TNRC18O15417 2968 aaPredicted RBP8.97□□□□□ -0.97
CKS1B-205ENST00000473344 ANKRD36CQ5JPF3 1778 aa8.96□□□□□ -0.97
CKS1B-205ENST00000473344 DUOX1Q9NRD9 1551 aa8.96□□□□□ -0.97
CKS1B-205ENST00000473344 TRPA1O75762 1119 aa8.96□□□□□ -0.98
CKS1B-205ENST00000473344 EGFRP00533 1210 aa8.96□□□□□ -0.98
CKS1B-205ENST00000473344 KIF23Q02241 960 aaPredicted RBP8.96□□□□□ -0.98
CKS1B-205ENST00000473344 RUNDC1Q96C34 613 aa8.96□□□□□ -0.98
CKS1B-205ENST00000473344 ZIC5Q96T25 663 aa8.96□□□□□ -0.98
CKS1B-205ENST00000473344 KCNQ5Q9NR82 932 aa8.96□□□□□ -0.98
CKS1B-205ENST00000473344 GGA3Q9NZ52 723 aa8.96□□□□□ -0.98
CKS1B-205ENST00000473344 LAMB2P55268 1798 aa8.95□□□□□ -0.98
CKS1B-205ENST00000473344 FAM155AB1AL88 458 aaPredicted RBP8.95□□□□□ -0.98
CKS1B-205ENST00000473344 UFL1O94874 794 aa8.95□□□□□ -0.98
CKS1B-205ENST00000473344 CCDC152Q4G0S7 254 aa8.95□□□□□ -0.98
CKS1B-205ENST00000473344 ZBTB38Q8NAP3 1195 aaPredicted RBP8.95□□□□□ -0.98
CKS1B-205ENST00000473344 GGA1Q9UJY5 639 aa8.95□□□□□ -0.98
CKS1B-205ENST00000473344 RTL9Q8NET4 1388 aa8.95□□□□□ -0.98
CKS1B-205ENST00000473344 LRRC37AA6NMS7 1700 aa8.94□□□□□ -0.98
CKS1B-205ENST00000473344 POTEB3A0JP26 581 aa8.94□□□□□ -0.98
CKS1B-205ENST00000473344 SLC10A3P09131 477 aa8.94□□□□□ -0.98
CKS1B-205ENST00000473344 VIL1P09327 827 aaKnown RBP8.94□□□□□ -0.98
CKS1B-205ENST00000473344 TRIM28Q13263 835 aaKnown RBP8.94□□□□□ -0.98
CKS1B-205ENST00000473344 ANGEL2Q5VTE6 544 aaKnown RBP8.94□□□□□ -0.98
CKS1B-205ENST00000473344 DUSP27Q5VZP5 1158 aa8.94□□□□□ -0.98
CKS1B-205ENST00000473344 RSBN1LQ6PCB5 846 aaPredicted RBP8.94□□□□□ -0.98
CKS1B-205ENST00000473344 POTEBQ6S5H4 581 aa8.94□□□□□ -0.98
CKS1B-205ENST00000473344 CDCA5Q96FF9 252 aa8.94□□□□□ -0.98
CKS1B-205ENST00000473344 RNF186Q9NXI6 227 aa8.94□□□□□ -0.98
CKS1B-205ENST00000473344 PODXL2Q9NZ53 605 aa8.94□□□□□ -0.98
CKS1B-205ENST00000473344 MYBBP1AQ9BQG0 1328 aaKnown RBP8.94□□□□□ -0.98
CKS1B-205ENST00000473344 SCARF1Q14162 830 aa8.93□□□□□ -0.98
CKS1B-205ENST00000473344 ANKRD18AQ8IVF6 992 aa8.93□□□□□ -0.98
CKS1B-205ENST00000473344 AGBL3Q8NEM8 1001 aa8.93□□□□□ -0.98
CKS1B-205ENST00000473344 CCDC85AQ96PX6 553 aaPredicted RBP8.93□□□□□ -0.98
CKS1B-205ENST00000473344 CSRNP1Q96S65 589 aa8.93□□□□□ -0.98
CKS1B-205ENST00000473344 MYD88Q99836 296 aa8.93□□□□□ -0.98
CKS1B-205ENST00000473344 MYOZ2Q9NPC6 264 aa8.93□□□□□ -0.98
CKS1B-205ENST00000473344 SEC31BQ9NQW1 1179 aa8.93□□□□□ -0.98
CKS1B-205ENST00000473344 DDX60Q8IY21 1712 aaKnown RBP8.92□□□□□ -0.98
CKS1B-205ENST00000473344 ASTN2O75129 1339 aaPredicted RBP8.92□□□□□ -0.98
CKS1B-205ENST00000473344 XDHP47989 1333 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 USP17L3A6NCW0 530 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 USP17L4A6NCW7 530 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 PDE8AO60658 829 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 DDX58O95786 925 aaKnown RBP8.92□□□□□ -0.98
CKS1B-205ENST00000473344 USP17L8P0C7I0 530 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 SOX10P56693 466 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 FKBP1BP68106 108 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 CALD1Q05682 793 aaKnown RBP8.92□□□□□ -0.98
CKS1B-205ENST00000473344 DIEXFQ68CQ4 756 aaKnown RBP8.92□□□□□ -0.98
CKS1B-205ENST00000473344 USP17L1Q7RTZ2 530 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 PODNQ7Z5L7 613 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 OGFOD1Q8N543 542 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 CCDC191Q8NCU4 936 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 CHMP4AQ9BY43 222 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 MBIPQ9NS73 344 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 CWC25Q9NXE8 425 aaPredicted RBP8.92□□□□□ -0.98
CKS1B-205ENST00000473344 HDAC9Q9UKV0 1011 aa8.92□□□□□ -0.98
CKS1B-205ENST00000473344 PITPNM2Q9BZ72 1349 aa8.91□□□□□ -0.98
CKS1B-205ENST00000473344 ELL2O00472 640 aaPredicted RBP8.91□□□□□ -0.98
CKS1B-205ENST00000473344 PCCAP05165 728 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms