RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 PDE2AO00408 941 aaPredicted RBP7.98□□□□□ -1.13
PRPF40A-208ENST00000472760 USP17L7P0C7H9 530 aa7.98□□□□□ -1.13
PRPF40A-208ENST00000472760 PERM1Q5SV97 790 aa7.98□□□□□ -1.13
PRPF40A-208ENST00000472760 CCNJLQ8IV13 435 aa7.98□□□□□ -1.13
PRPF40A-208ENST00000472760 TMEM102Q8N9M5 508 aaPredicted RBP7.98□□□□□ -1.13
PRPF40A-208ENST00000472760 SMG9Q9H0W8 520 aaKnown RBP7.98□□□□□ -1.13
PRPF40A-208ENST00000472760 NFKBIEO00221 500 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 GSTT1P30711 240 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 GMPRP36959 345 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 FCGRTP55899 365 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 PSAPL1Q6NUJ1 521 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 PRPF40BQ6NWY9 871 aaKnown RBP7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 GLIS3Q8NEA6 775 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 ASAP3Q8TDY4 903 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 NXPE3Q969Y0 559 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 CRELD1Q96HD1 420 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 HHIPQ96QV1 700 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 TCF12Q99081 682 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 MDFIQ99750 246 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 FRRS1LQ9P0K9 344 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 NAGPAQ9UK23 515 aa7.97□□□□□ -1.13
PRPF40A-208ENST00000472760 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 RGS9O75916 674 aaPredicted RBP7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 EPXP11678 715 aa7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 XRCC5P13010 732 aaKnown RBP7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 DTHD1Q6ZMT9 781 aa7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 GALNT6Q8NCL4 622 aa7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 NUDT8Q8WV74 236 aa7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 EDARADDQ8WWZ3 215 aa7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 ZNF775Q96BV0 537 aaPredicted RBP7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 POP1Q99575 1024 aaKnown RBP7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 LPIN3Q9BQK8 851 aa7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 BHLHE41Q9C0J9 482 aaPredicted RBP7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 AKAP2Q9Y2D5 859 aa7.96□□□□□ -1.14
PRPF40A-208ENST00000472760 FAM177BA6PVY3 158 aa7.95□□□□□ -1.14
PRPF40A-208ENST00000472760 METTL12A8MUP2 240 aa7.95□□□□□ -1.14
PRPF40A-208ENST00000472760 SCAMP3O14828 347 aaKnown RBP7.95□□□□□ -1.14
PRPF40A-208ENST00000472760 CTSHP09668 335 aa7.95□□□□□ -1.14
PRPF40A-208ENST00000472760 TCF3P15923 654 aa7.95□□□□□ -1.14
PRPF40A-208ENST00000472760 ZFYVE1Q9HBF4 777 aa7.95□□□□□ -1.14
PRPF40A-208ENST00000472760 ABCB6Q9NP58 842 aa7.95□□□□□ -1.14
PRPF40A-208ENST00000472760 A0A096LPE4 126 aa7.94□□□□□ -1.14
PRPF40A-208ENST00000472760 A0A1W2PPZ6 126 aa7.94□□□□□ -1.14
PRPF40A-208ENST00000472760 OIP5O43482 229 aa7.94□□□□□ -1.14
PRPF40A-208ENST00000472760 SLURP2P0DP57 97 aa7.94□□□□□ -1.14
PRPF40A-208ENST00000472760 BCRP11274 1271 aa7.94□□□□□ -1.14
PRPF40A-208ENST00000472760 GRIA4P48058 902 aa7.94□□□□□ -1.14
PRPF40A-208ENST00000472760 TAF1CQ15572 869 aaPredicted RBP7.94□□□□□ -1.14
PRPF40A-208ENST00000472760 SPRED3Q2MJR0 410 aa7.94□□□□□ -1.14
PRPF40A-208ENST00000472760 C1orf229Q6ZS94 237 aaPredicted RBP7.94□□□□□ -1.14
PRPF40A-208ENST00000472760 PTPRAP18433 802 aa7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 AMPD1P23109 780 aa7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 LDLRAD1Q5T700 205 aa7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 MEI1Q5TIA1 1274 aa7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 GDF6Q6KF10 455 aaPredicted RBP7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 KANK3Q6NY19 840 aa7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 BSNDQ8WZ55 320 aa7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 TTC9Q92623 222 aa7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 LACRTQ9GZZ8 138 aa7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 JPH1Q9HDC5 661 aaPredicted RBP7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 TTF2Q9UNY4 1162 aaKnown RBP7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 TRIM33Q9UPN9 1127 aa7.93□□□□□ -1.14
PRPF40A-208ENST00000472760 ITPKAP23677 461 aa7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 PTPN12Q05209 780 aaKnown RBP7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 LYPD4Q6UWN0 246 aa7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 TREML4Q6UXN2 200 aa7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 CHSY3Q70JA7 882 aa7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 C3orf58Q8NDZ4 430 aa7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 RNF34Q969K3 372 aa7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 BTBD6Q96KE9 485 aa7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 METTL5Q9NRN9 209 aaKnown RBP7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 IGSF5Q9NSI5 407 aa7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 STARD13Q9Y3M8 1113 aa7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 USP31Q70CQ4 1352 aa7.92□□□□□ -1.14
PRPF40A-208ENST00000472760 LILRB5O75023 590 aa7.91□□□□□ -1.14
PRPF40A-208ENST00000472760 ALBP02768 609 aa7.91□□□□□ -1.14
PRPF40A-208ENST00000472760 CELA2BP08218 269 aaPredicted RBP7.91□□□□□ -1.14
PRPF40A-208ENST00000472760 ZNF76P36508 570 aa7.91□□□□□ -1.14
PRPF40A-208ENST00000472760 ST13P50502 369 aaKnown RBP7.91□□□□□ -1.14
PRPF40A-208ENST00000472760 LCE2CQ5TA81 110 aa7.91□□□□□ -1.14
PRPF40A-208ENST00000472760 CACTIN-AS1Q8N1I8 211 aa7.91□□□□□ -1.14
PRPF40A-208ENST00000472760 LRRC4BQ9NT99 713 aa7.91□□□□□ -1.14
PRPF40A-208ENST00000472760 PPM1HQ9ULR3 514 aa7.91□□□□□ -1.14
PRPF40A-208ENST00000472760 M0R082 166 aa7.9□□□□□ -1.14
PRPF40A-208ENST00000472760 CDC27P30260 824 aa7.9□□□□□ -1.14
PRPF40A-208ENST00000472760 CABP4P57796 275 aa7.9□□□□□ -1.14
PRPF40A-208ENST00000472760 MAP3K10Q02779 954 aa7.9□□□□□ -1.14
PRPF40A-208ENST00000472760 C20orf204Q6ZNR8 217 aa7.9□□□□□ -1.14
PRPF40A-208ENST00000472760 ZNF417Q8TAU3 575 aa7.9□□□□□ -1.14
PRPF40A-208ENST00000472760 ZNF587Q96SQ5 575 aaPredicted RBP7.9□□□□□ -1.14
PRPF40A-208ENST00000472760 ADAM19Q9H013 955 aa7.9□□□□□ -1.14
PRPF40A-208ENST00000472760 MUC3BQ9H195 1237 aa7.9□□□□□ -1.14
PRPF40A-208ENST00000472760 SH2B1Q9NRF2 756 aaPredicted RBP7.9□□□□□ -1.14
PRPF40A-208ENST00000472760 SHISA8B8ZZ34 492 aa7.89□□□□□ -1.15
PRPF40A-208ENST00000472760 FANCCQ00597 558 aa7.89□□□□□ -1.15
PRPF40A-208ENST00000472760 RPS26P11Q5JNZ5 115 aaPredicted RBP7.89□□□□□ -1.15
PRPF40A-208ENST00000472760 C9orf131Q5VYM1 1079 aa7.89□□□□□ -1.15
PRPF40A-208ENST00000472760 IL22RA1Q8N6P7 574 aa7.89□□□□□ -1.15
PRPF40A-208ENST00000472760 CEP44Q9C0F1 390 aa7.89□□□□□ -1.15
PRPF40A-208ENST00000472760 CLEC4MQ9H2X3 399 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms