RNA–Protein interactions for RNA: ENST00000472749.6

ZIC4-208, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-208ENST00000472749 RNF217Q8TC41 542 aa11.33□□□□□ -0.6
ZIC4-208ENST00000472749 ZNF594Q96JF6 807 aaPredicted RBP11.33□□□□□ -0.6
ZIC4-208ENST00000472749 AK7Q96M32 723 aa11.33□□□□□ -0.6
ZIC4-208ENST00000472749 AXIN2Q9Y2T1 843 aa11.33□□□□□ -0.6
ZIC4-208ENST00000472749 LARP1Q6PKG0 1096 aaKnown RBP11.32□□□□□ -0.6
ZIC4-208ENST00000472749 LEKR1Q6ZMV7 388 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 FILIP1Q7Z7B0 1213 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 ANKRD20A12PQ8NF67 263 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 ZNF496Q96IT1 587 aaPredicted RBP11.32□□□□□ -0.6
ZIC4-208ENST00000472749 NUP62CLQ9H1M0 184 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 DACT1Q9NYF0 836 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 ITSN1Q15811 1721 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 NRXN3Q9Y4C0 1643 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 GIGYF1O75420 1035 aaPredicted RBP11.32□□□□□ -0.6
ZIC4-208ENST00000472749 MUM1L1Q5H9M0 696 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 DBNDD2Q9BQY9 259 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 HYPKQ9NX55 129 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 C3P01024 1663 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 COL9A3Q14050 684 aaPredicted RBP11.32□□□□□ -0.6
ZIC4-208ENST00000472749 POLA2Q14181 598 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 ARID5BQ14865 1188 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 CACTINQ8WUQ7 758 aaKnown RBP11.32□□□□□ -0.6
ZIC4-208ENST00000472749 TPCN1Q9ULQ1 816 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 TAF6LQ9Y6J9 622 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 PTPRUQ92729 1446 aa11.32□□□□□ -0.6
ZIC4-208ENST00000472749 CCDC192P0DO97 292 aa11.31□□□□□ -0.6
ZIC4-208ENST00000472749 IBSPP21815 317 aaPredicted RBP11.31□□□□□ -0.6
ZIC4-208ENST00000472749 GPTP24298 496 aa11.31□□□□□ -0.6
ZIC4-208ENST00000472749 ME1P48163 572 aa11.31□□□□□ -0.6
ZIC4-208ENST00000472749 MNAT1P51948 309 aa11.31□□□□□ -0.6
ZIC4-208ENST00000472749 AMOTQ4VCS5 1084 aa11.31□□□□□ -0.6
ZIC4-208ENST00000472749 TTC14Q96N46 770 aa11.31□□□□□ -0.6
ZIC4-208ENST00000472749 NCOA5Q9HCD5 579 aaKnown RBP11.31□□□□□ -0.6
ZIC4-208ENST00000472749 CLIP2Q9UDT6 1046 aa11.31□□□□□ -0.6
ZIC4-208ENST00000472749 LINS1Q8NG48 757 aa11.31□□□□□ -0.6
ZIC4-208ENST00000472749 SDF4Q9BRK5 362 aa11.31□□□□□ -0.6
ZIC4-208ENST00000472749 ARGLU1Q9NWB6 273 aaPredicted RBP11.31□□□□□ -0.6
ZIC4-208ENST00000472749 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.31□□□□□ -0.6
ZIC4-208ENST00000472749 MON2Q7Z3U7 1717 aa11.31□□□□□ -0.6
ZIC4-208ENST00000472749 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
ZIC4-208ENST00000472749 ZNF589Q86UQ0 364 aaPredicted RBP11.31□□□□□ -0.6
ZIC4-208ENST00000472749 DONSONQ9NYP3 566 aa11.31□□□□□ -0.6
ZIC4-208ENST00000472749 CCDC171Q6TFL3 1326 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 SSH2Q76I76 1423 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 CPLX1O14810 134 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 Q6ZUG5 572 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 CCDC82Q8N4S0 544 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 LRRN4CLQ8ND94 238 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 SLC27A2O14975 620 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 ATP6V1AP38606 617 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 EPHA10Q5JZY3 1008 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 OTUD7BQ6GQQ9 843 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 CCDC144CPQ8IYA2 1237 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 UBXN4Q92575 508 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 AOX1Q06278 1338 aa11.3□□□□□ -0.6
ZIC4-208ENST00000472749 BIN1O00499 593 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 IRF6O14896 467 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 POLR3DP05423 398 aaPredicted RBP11.29□□□□□ -0.6
ZIC4-208ENST00000472749 MAP3K11Q16584 847 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 LRCH2Q5VUJ6 765 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 ZNF790Q6PG37 636 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 PLEKHA4Q9H4M7 779 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 PRDM11Q9NQV5 511 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 MTMR6Q9Y217 621 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 LIG1P18858 919 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 FBXO18Q8NFZ0 1043 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.29□□□□□ -0.6
ZIC4-208ENST00000472749 SASH1O94885 1247 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 A1BGP04217 495 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 SKILP12757 684 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 PDCP20941 246 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 APOBRQ0VD83 1088 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 BIRC2Q13490 618 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 RPAINQ86UA6 219 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 ZSCAN31Q96LW9 406 aaPredicted RBP11.29□□□□□ -0.6
ZIC4-208ENST00000472749 EPC1Q9H2F5 836 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
ZIC4-208ENST00000472749 SETD1AO15047 1707 aaKnown RBP11.29□□□□□ -0.6
ZIC4-208ENST00000472749 PLEKHG1Q9ULL1 1385 aa11.29□□□□□ -0.6
ZIC4-208ENST00000472749 GOLGA5Q8TBA6 731 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 CNKSR2Q8WXI2 1034 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 FTOQ9C0B1 505 aaKnown RBP eCLIP11.28□□□□□ -0.6
ZIC4-208ENST00000472749 DNAJC25Q9H1X3 360 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 FAM53CQ9NYF3 392 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 EIF3CLB5ME19 914 aaKnown RBP11.28□□□□□ -0.6
ZIC4-208ENST00000472749 ANO6Q4KMQ2 910 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 RRP12Q5JTH9 1297 aaKnown RBP11.28□□□□□ -0.6
ZIC4-208ENST00000472749 FOXR1Q6PIV2 292 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 MICALL1Q8N3F8 863 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 EIF3CQ99613 913 aaKnown RBP11.28□□□□□ -0.6
ZIC4-208ENST00000472749 AGLP35573 1532 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 MAGEA9P43362 315 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 SMC1AQ14683 1233 aaKnown RBP11.28□□□□□ -0.6
ZIC4-208ENST00000472749 VPS53Q5VIR6 699 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 HOMER1Q86YM7 354 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 MNS1Q8NEH6 495 aa11.28□□□□□ -0.6
ZIC4-208ENST00000472749 TTC41PQ6P2S7 1318 aa11.27□□□□□ -0.6
ZIC4-208ENST00000472749 RXRAP19793 462 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms