RNA–Protein interactions for RNA: ENST00000472735.5

GPM6B-207, Transcript of glycoprotein M6B, humanhuman

TSL 4

Gene GPM6B, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-207ENST00000472735 WTIPA6NIX2 430 aaPredicted RBP13.19□□□□□ -0.3
GPM6B-207ENST00000472735 RASSF10A6NK89 507 aa13.19□□□□□ -0.3
GPM6B-207ENST00000472735 G3V3G9 751 aa13.19□□□□□ -0.3
GPM6B-207ENST00000472735 VIL1P09327 827 aaKnown RBP13.19□□□□□ -0.3
GPM6B-207ENST00000472735 RPS12P25398 132 aaKnown RBP13.19□□□□□ -0.3
GPM6B-207ENST00000472735 VEGFBP49765 207 aa13.19□□□□□ -0.3
GPM6B-207ENST00000472735 CST9Q5W186 159 aa13.19□□□□□ -0.3
GPM6B-207ENST00000472735 ITGA6P23229 1130 aa13.18□□□□□ -0.3
GPM6B-207ENST00000472735 DEFB115Q30KQ5 88 aa13.18□□□□□ -0.3
GPM6B-207ENST00000472735 SAMD7Q7Z3H4 446 aa13.18□□□□□ -0.3
GPM6B-207ENST00000472735 GLIS2Q9BZE0 524 aaPredicted RBP13.18□□□□□ -0.3
GPM6B-207ENST00000472735 EGFRP00533 1210 aa13.17□□□□□ -0.3
GPM6B-207ENST00000472735 IGHMBP2P38935 993 aaKnown RBP13.17□□□□□ -0.3
GPM6B-207ENST00000472735 FOXO4P98177 505 aa13.17□□□□□ -0.3
GPM6B-207ENST00000472735 FAM161AQ3B820 660 aa13.17□□□□□ -0.3
GPM6B-207ENST00000472735 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
GPM6B-207ENST00000472735 ABT1Q9ULW3 272 aaKnown RBP13.17□□□□□ -0.3
GPM6B-207ENST00000472735 MNX1P50219 401 aaPredicted RBP13.16□□□□□ -0.3
GPM6B-207ENST00000472735 CCT4P50991 539 aaKnown RBP13.16□□□□□ -0.3
GPM6B-207ENST00000472735 TBC1D10BQ4KMP7 808 aaPredicted RBP13.16□□□□□ -0.3
GPM6B-207ENST00000472735 CDC37L1Q7L3B6 337 aa13.16□□□□□ -0.3
GPM6B-207ENST00000472735 PODNQ7Z5L7 613 aa13.16□□□□□ -0.3
GPM6B-207ENST00000472735 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
GPM6B-207ENST00000472735 WDR70Q9NW82 654 aa13.16□□□□□ -0.3
GPM6B-207ENST00000472735 MED23Q9ULK4 1368 aa13.16□□□□□ -0.3
GPM6B-207ENST00000472735 WDR33Q9C0J8 1336 aaKnown RBP13.15□□□□□ -0.3
GPM6B-207ENST00000472735 E9PSI1 815 aa13.15□□□□□ -0.3
GPM6B-207ENST00000472735 RBM26Q5T8P6 1007 aaKnown RBP13.15□□□□□ -0.3
GPM6B-207ENST00000472735 RSBN1LQ6PCB5 846 aaPredicted RBP13.15□□□□□ -0.3
GPM6B-207ENST00000472735 AGBL3Q8NEM8 1001 aa13.15□□□□□ -0.3
GPM6B-207ENST00000472735 MPHOSPH8Q99549 860 aa13.15□□□□□ -0.3
GPM6B-207ENST00000472735 LEMD3Q9Y2U8 911 aa13.15□□□□□ -0.3
GPM6B-207ENST00000472735 TLL2Q9Y6L7 1015 aa13.15□□□□□ -0.3
GPM6B-207ENST00000472735 ZNF609O15014 1411 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 ANKRD18BA2A2Z9 1011 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 USP17L3A6NCW0 530 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 USP17L4A6NCW7 530 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 GRM8O00222 908 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 ALDH1L1O75891 902 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
GPM6B-207ENST00000472735 PYGBP11216 843 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 ZNF280AP59817 542 aaPredicted RBP13.14□□□□□ -0.31
GPM6B-207ENST00000472735 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 EPHA10Q5JZY3 1008 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 USP17L1Q7RTZ2 530 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 USP48Q86UV5 1035 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 POTEDQ86YR6 584 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 MRPL50Q8N5N7 158 aaKnown RBP13.14□□□□□ -0.31
GPM6B-207ENST00000472735 GMLQ99445 158 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 ANKRD2Q9GZV1 360 aa13.14□□□□□ -0.31
GPM6B-207ENST00000472735 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
GPM6B-207ENST00000472735 CHRNDQ07001 517 aa13.13□□□□□ -0.31
GPM6B-207ENST00000472735 IFIT5Q13325 482 aaKnown RBP13.13□□□□□ -0.31
GPM6B-207ENST00000472735 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
GPM6B-207ENST00000472735 LMBR1LQ6UX01 489 aa13.13□□□□□ -0.31
GPM6B-207ENST00000472735 DLK2Q6UY11 383 aa13.13□□□□□ -0.31
GPM6B-207ENST00000472735 SRCIN1Q9C0H9 1055 aa13.13□□□□□ -0.31
GPM6B-207ENST00000472735 COA1Q9GZY4 146 aa13.13□□□□□ -0.31
GPM6B-207ENST00000472735 WBP1LQ9NX94 342 aa13.13□□□□□ -0.31
GPM6B-207ENST00000472735 C9orf78Q9NZ63 289 aaPredicted RBP13.13□□□□□ -0.31
GPM6B-207ENST00000472735 CCER2I3L3R5 266 aa13.12□□□□□ -0.31
GPM6B-207ENST00000472735 FOXN1O15353 648 aa13.12□□□□□ -0.31
GPM6B-207ENST00000472735 KLRK1P26718 216 aa13.12□□□□□ -0.31
GPM6B-207ENST00000472735 CYP4F22Q6NT55 531 aa13.12□□□□□ -0.31
GPM6B-207ENST00000472735 KRT26Q7Z3Y9 468 aa13.12□□□□□ -0.31
GPM6B-207ENST00000472735 SAPCD2Q86UD0 394 aa13.12□□□□□ -0.31
GPM6B-207ENST00000472735 DCPSQ96C86 337 aaKnown RBP13.12□□□□□ -0.31
GPM6B-207ENST00000472735 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
GPM6B-207ENST00000472735 CAPNS2Q96L46 248 aa13.12□□□□□ -0.31
GPM6B-207ENST00000472735 ZNF408Q9H9D4 720 aa13.12□□□□□ -0.31
GPM6B-207ENST00000472735 CHMP3Q9Y3E7 222 aa13.12□□□□□ -0.31
GPM6B-207ENST00000472735 USP17L8P0C7I0 530 aa13.11□□□□□ -0.31
GPM6B-207ENST00000472735 ECE1P42892 770 aa13.11□□□□□ -0.31
GPM6B-207ENST00000472735 DACT2Q5SW24 774 aa13.11□□□□□ -0.31
GPM6B-207ENST00000472735 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
GPM6B-207ENST00000472735 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
GPM6B-207ENST00000472735 HHIPL1Q96JK4 782 aa13.11□□□□□ -0.31
GPM6B-207ENST00000472735 UTYO14607 1347 aa13.11□□□□□ -0.31
GPM6B-207ENST00000472735 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
GPM6B-207ENST00000472735 ADM5C9JUS6 153 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 SNAP23O00161 211 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 TAF5LO75529 589 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
GPM6B-207ENST00000472735 KCNJ4P48050 445 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 CCDC57Q2TAC2 916 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 STRIP1Q5VSL9 837 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 HELBQ8NG08 1087 aaPredicted RBP13.1□□□□□ -0.31
GPM6B-207ENST00000472735 KAZALD1Q96I82 304 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 SUCLG2Q96I99 432 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 ZNF594Q96JF6 807 aaPredicted RBP13.1□□□□□ -0.31
GPM6B-207ENST00000472735 MXD3Q9BW11 206 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 MYOZ2Q9NPC6 264 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 GGA3Q9NZ52 723 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 PTPRCP08575 1304 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 IRS2Q9Y4H2 1338 aa13.1□□□□□ -0.31
GPM6B-207ENST00000472735 SCN9AQ15858 1988 aa13.09□□□□□ -0.31
GPM6B-207ENST00000472735 MAP2K1Q02750 393 aaPredicted RBP13.09□□□□□ -0.31
GPM6B-207ENST00000472735 GRM1Q13255 1194 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms