RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 CCDC158Q5M9N0 1113 aa12.91□□□□□ -0.34
UBE2F-220ENST00000472479 SNAP23O00161 211 aa12.91□□□□□ -0.34
UBE2F-220ENST00000472479 TTC39AQ5SRH9 613 aa12.91□□□□□ -0.34
UBE2F-220ENST00000472479 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
UBE2F-220ENST00000472479 RGS3P49796 1198 aa12.9□□□□□ -0.34
UBE2F-220ENST00000472479 WASHC4Q2M389 1173 aa12.9□□□□□ -0.34
UBE2F-220ENST00000472479 C16orf71Q8IYS4 520 aaPredicted RBP12.9□□□□□ -0.34
UBE2F-220ENST00000472479 TBC1D16Q8TBP0 767 aa12.9□□□□□ -0.34
UBE2F-220ENST00000472479 EAF2Q96CJ1 260 aaPredicted RBP12.9□□□□□ -0.34
UBE2F-220ENST00000472479 XAGE2Q96GT9 111 aa12.9□□□□□ -0.34
UBE2F-220ENST00000472479 GPR101Q96P66 508 aaPredicted RBP12.9□□□□□ -0.34
UBE2F-220ENST00000472479 GNL3LQ9NVN8 582 aaKnown RBP12.9□□□□□ -0.34
UBE2F-220ENST00000472479 KDM2BQ8NHM5 1336 aa12.89□□□□□ -0.35
UBE2F-220ENST00000472479 ZNF804AQ7Z570 1209 aa12.89□□□□□ -0.35
UBE2F-220ENST00000472479 SLC51AQ86UW1 340 aa12.89□□□□□ -0.35
UBE2F-220ENST00000472479 DBNDD2Q9BQY9 259 aa12.89□□□□□ -0.35
UBE2F-220ENST00000472479 PODXL2Q9NZ53 605 aa12.89□□□□□ -0.35
UBE2F-220ENST00000472479 TAF1P21675 1872 aa12.88□□□□□ -0.35
UBE2F-220ENST00000472479 PPIP5K2O43314 1243 aa12.88□□□□□ -0.35
UBE2F-220ENST00000472479 HIBADHP31937 336 aaKnown RBP12.88□□□□□ -0.35
UBE2F-220ENST00000472479 FKBP4Q02790 459 aaKnown RBP eCLIP12.88□□□□□ -0.35
UBE2F-220ENST00000472479 VGLL2Q8N8G2 317 aa12.88□□□□□ -0.35
UBE2F-220ENST00000472479 C7orf43Q8WVR3 580 aa12.88□□□□□ -0.35
UBE2F-220ENST00000472479 FBXW7Q969H0 707 aa12.88□□□□□ -0.35
UBE2F-220ENST00000472479 TAOK3Q9H2K8 898 aa12.88□□□□□ -0.35
UBE2F-220ENST00000472479 POLLQ9UGP5 575 aa12.88□□□□□ -0.35
UBE2F-220ENST00000472479 COL11A2P13942 1736 aaPredicted RBP12.87□□□□□ -0.35
UBE2F-220ENST00000472479 WTIPA6NIX2 430 aaPredicted RBP12.87□□□□□ -0.35
UBE2F-220ENST00000472479 ERC2O15083 957 aa12.87□□□□□ -0.35
UBE2F-220ENST00000472479 ADORA1P30542 326 aa12.87□□□□□ -0.35
UBE2F-220ENST00000472479 GYG1P46976 350 aa12.87□□□□□ -0.35
UBE2F-220ENST00000472479 LARGE2Q8N3Y3 721 aa12.87□□□□□ -0.35
UBE2F-220ENST00000472479 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.87□□□□□ -0.35
UBE2F-220ENST00000472479 SPEF2Q9C093 1822 aa12.86□□□□□ -0.35
UBE2F-220ENST00000472479 GRIN3BO60391 1043 aa12.86□□□□□ -0.35
UBE2F-220ENST00000472479 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
UBE2F-220ENST00000472479 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
UBE2F-220ENST00000472479 MX1P20591 662 aa12.86□□□□□ -0.35
UBE2F-220ENST00000472479 FGFR2P21802 821 aa12.86□□□□□ -0.35
UBE2F-220ENST00000472479 BCAMP50895 628 aa12.86□□□□□ -0.35
UBE2F-220ENST00000472479 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
UBE2F-220ENST00000472479 JDP2Q8WYK2 163 aa12.86□□□□□ -0.35
UBE2F-220ENST00000472479 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
UBE2F-220ENST00000472479 ECHDC1Q9NTX5 307 aa12.86□□□□□ -0.35
UBE2F-220ENST00000472479 KIF13BQ9NQT8 1826 aa12.86□□□□□ -0.35
UBE2F-220ENST00000472479 AOC3Q16853 763 aa12.85□□□□□ -0.35
UBE2F-220ENST00000472479 CCDC102BQ68D86 513 aa12.85□□□□□ -0.35
UBE2F-220ENST00000472479 PSMD1Q99460 953 aa12.85□□□□□ -0.35
UBE2F-220ENST00000472479 TLR7Q9NYK1 1049 aaKnown RBP12.85□□□□□ -0.35
UBE2F-220ENST00000472479 DBNLQ9UJU6 430 aaKnown RBP12.85□□□□□ -0.35
UBE2F-220ENST00000472479 IQSEC3Q9UPP2 1182 aaPredicted RBP12.85□□□□□ -0.35
UBE2F-220ENST00000472479 SLX4Q8IY92 1834 aa12.85□□□□□ -0.35
UBE2F-220ENST00000472479 TRIM6-TRIM34B2RNG4 842 aa12.85□□□□□ -0.35
UBE2F-220ENST00000472479 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
UBE2F-220ENST00000472479 PHKA1P46020 1223 aa12.85□□□□□ -0.35
UBE2F-220ENST00000472479 CHAF1AQ13111 956 aaPredicted RBP12.85□□□□□ -0.35
UBE2F-220ENST00000472479 NIM1KQ8IY84 436 aa12.85□□□□□ -0.35
UBE2F-220ENST00000472479 OTUD7AQ8TE49 926 aaPredicted RBP12.85□□□□□ -0.35
UBE2F-220ENST00000472479 FAM84BQ96KN1 310 aaPredicted RBP12.85□□□□□ -0.35
UBE2F-220ENST00000472479 DNAJC2Q99543 621 aaKnown RBP12.85□□□□□ -0.35
UBE2F-220ENST00000472479 BOLA2Q9H3K6 86 aa12.85□□□□□ -0.35
UBE2F-220ENST00000472479 COL4A1P02462 1669 aa12.84□□□□□ -0.35
UBE2F-220ENST00000472479 CACNA1SQ13698 1873 aa12.84□□□□□ -0.35
UBE2F-220ENST00000472479 GLRX3O76003 335 aaKnown RBP12.84□□□□□ -0.35
UBE2F-220ENST00000472479 KLRK1P26718 216 aa12.84□□□□□ -0.35
UBE2F-220ENST00000472479 PDE1AP54750 535 aa12.84□□□□□ -0.35
UBE2F-220ENST00000472479 RASSF7Q02833 373 aa12.84□□□□□ -0.35
UBE2F-220ENST00000472479 TSHZ3Q63HK5 1081 aa12.84□□□□□ -0.35
UBE2F-220ENST00000472479 RTFDC1Q9BY42 306 aaPredicted RBP12.84□□□□□ -0.35
UBE2F-220ENST00000472479 COA1Q9GZY4 146 aa12.84□□□□□ -0.35
UBE2F-220ENST00000472479 VPS33BQ9H267 617 aa12.84□□□□□ -0.35
UBE2F-220ENST00000472479 DBNDD1Q9H9R9 158 aa12.84□□□□□ -0.35
UBE2F-220ENST00000472479 SNRKQ9NRH2 765 aa12.84□□□□□ -0.35
UBE2F-220ENST00000472479 TTC41PQ6P2S7 1318 aa12.83□□□□□ -0.35
UBE2F-220ENST00000472479 ZNF609O15014 1411 aa12.83□□□□□ -0.36
UBE2F-220ENST00000472479 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.363e-6■■□□□ 12.2
UBE2F-220ENST00000472479 PDE4AP27815 886 aa12.83□□□□□ -0.36
UBE2F-220ENST00000472479 TXNRD3Q86VQ6 643 aa12.83□□□□□ -0.36
UBE2F-220ENST00000472479 SKAP1Q86WV1 359 aa12.83□□□□□ -0.36
UBE2F-220ENST00000472479 PLEKHM2Q8IWE5 1019 aa12.83□□□□□ -0.36
UBE2F-220ENST00000472479 RILPL2Q969X0 211 aa12.83□□□□□ -0.36
UBE2F-220ENST00000472479 CD209Q9NNX6 404 aa12.83□□□□□ -0.36
UBE2F-220ENST00000472479 DENND2AQ9ULE3 1009 aa12.83□□□□□ -0.36
UBE2F-220ENST00000472479 MED23Q9ULK4 1368 aa12.82□□□□□ -0.36
UBE2F-220ENST00000472479 NFKBIEO00221 500 aa12.82□□□□□ -0.36
UBE2F-220ENST00000472479 MAP4K4O95819 1239 aaPredicted RBP12.82□□□□□ -0.36
UBE2F-220ENST00000472479 ATP5JP18859 108 aa12.82□□□□□ -0.36
UBE2F-220ENST00000472479 KIAA2012Q0VF49 1180 aa12.82□□□□□ -0.36
UBE2F-220ENST00000472479 FBXO33Q7Z6M2 555 aa12.82□□□□□ -0.36
UBE2F-220ENST00000472479 LRP5O75197 1615 aa12.81□□□□□ -0.36
UBE2F-220ENST00000472479 ECE2O60344 883 aa12.81□□□□□ -0.36
UBE2F-220ENST00000472479 LMNB1P20700 586 aa12.81□□□□□ -0.36
UBE2F-220ENST00000472479 EIF6P56537 245 aaKnown RBP12.81□□□□□ -0.36
UBE2F-220ENST00000472479 C15orf52Q6ZUT6 534 aaKnown RBP12.81□□□□□ -0.36
UBE2F-220ENST00000472479 PODNQ7Z5L7 613 aa12.81□□□□□ -0.36
UBE2F-220ENST00000472479 JAG2Q9Y219 1238 aa12.81□□□□□ -0.36
UBE2F-220ENST00000472479 DLEC1Q9Y238 1755 aa12.81□□□□□ -0.36
UBE2F-220ENST00000472479 SEMA3EO15041 775 aa12.8□□□□□ -0.36
UBE2F-220ENST00000472479 GTF2IP78347 998 aa12.8□□□□□ -0.36
UBE2F-220ENST00000472479 TTLL5Q6EMB2 1281 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms