RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 DCAF5Q96JK2 942 aa12.34□□□□□ -0.43
SGCE-210ENST00000472326 CSRNP1Q96S65 589 aa12.34□□□□□ -0.43
SGCE-210ENST00000472326 GDF11O95390 407 aa12.33□□□□□ -0.44
SGCE-210ENST00000472326 PLCB3Q01970 1234 aa12.33□□□□□ -0.44
SGCE-210ENST00000472326 GALNT12Q8IXK2 581 aa12.33□□□□□ -0.44
SGCE-210ENST00000472326 NPHS2Q9NP85 383 aa12.33□□□□□ -0.44
SGCE-210ENST00000472326 A0A0A0MRY4 1105 aa12.32□□□□□ -0.44
SGCE-210ENST00000472326 SPDYE3A6NKU9 549 aa12.32□□□□□ -0.44
SGCE-210ENST00000472326 CDC25BP30305 580 aa12.32□□□□□ -0.44
SGCE-210ENST00000472326 ILDR2Q71H61 639 aa12.32□□□□□ -0.44
SGCE-210ENST00000472326 PDE2AO00408 941 aaPredicted RBP12.31□□□□□ -0.44
SGCE-210ENST00000472326 TRIM28Q13263 835 aaKnown RBP12.31□□□□□ -0.44
SGCE-210ENST00000472326 TMEM151AQ8N4L1 468 aa12.31□□□□□ -0.44
SGCE-210ENST00000472326 CCDC74AQ96AQ1 378 aa12.31□□□□□ -0.44
SGCE-210ENST00000472326 DNAJC25Q9H1X3 360 aa12.31□□□□□ -0.44
SGCE-210ENST00000472326 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
SGCE-210ENST00000472326 A0A1W2PP55 124 aa12.3□□□□□ -0.44
SGCE-210ENST00000472326 KRBA1A5PL33 1030 aa12.3□□□□□ -0.44
SGCE-210ENST00000472326 MAPK8P45983 427 aa12.3□□□□□ -0.44
SGCE-210ENST00000472326 PRRT3Q5FWE3 981 aa12.3□□□□□ -0.44
SGCE-210ENST00000472326 TXNDC11Q6PKC3 985 aa12.3□□□□□ -0.44
SGCE-210ENST00000472326 PNMA6FA0A0J9YX94 578 aa12.29□□□□□ -0.44
SGCE-210ENST00000472326 ZBTB7CA1YPR0 619 aa12.29□□□□□ -0.44
SGCE-210ENST00000472326 METTL12A8MUP2 240 aa12.29□□□□□ -0.44
SGCE-210ENST00000472326 CDC27P30260 824 aa12.29□□□□□ -0.44
SGCE-210ENST00000472326 TMEM102Q8N9M5 508 aaPredicted RBP12.29□□□□□ -0.44
SGCE-210ENST00000472326 NXPE3Q969Y0 559 aa12.29□□□□□ -0.44
SGCE-210ENST00000472326 SPATA31C1P0DKV0 1188 aa12.28□□□□□ -0.44
SGCE-210ENST00000472326 PTPRAP18433 802 aa12.28□□□□□ -0.44
SGCE-210ENST00000472326 EPHA1P21709 976 aa12.28□□□□□ -0.44
SGCE-210ENST00000472326 RAC1P63000 192 aa12.28□□□□□ -0.44
SGCE-210ENST00000472326 GRIK4Q16099 956 aa12.28□□□□□ -0.44
SGCE-210ENST00000472326 EPS8L3Q8TE67 593 aaKnown RBP12.28□□□□□ -0.44
SGCE-210ENST00000472326 SETDB2Q96T68 719 aa12.28□□□□□ -0.44
SGCE-210ENST00000472326 PPME1Q9Y570 386 aa12.28□□□□□ -0.44
SGCE-210ENST00000472326 LINC01387J3KSC0 135 aa12.27□□□□□ -0.45
SGCE-210ENST00000472326 FMR1Q06787 632 aaKnown RBP eCLIP12.27□□□□□ -0.45
SGCE-210ENST00000472326 PI16Q6UXB8 463 aa12.27□□□□□ -0.45
SGCE-210ENST00000472326 FMR1NBQ8N0W7 255 aaPredicted RBP12.27□□□□□ -0.45
SGCE-210ENST00000472326 ASAP3Q8TDY4 903 aa12.27□□□□□ -0.45
SGCE-210ENST00000472326 ANKRD33BA6NCL7 494 aa12.26□□□□□ -0.45
SGCE-210ENST00000472326 DEAF1O75398 565 aaPredicted RBP12.26□□□□□ -0.45
SGCE-210ENST00000472326 ENOX2Q16206 610 aaKnown RBP12.26□□□□□ -0.45
SGCE-210ENST00000472326 CCDC27Q2M243 656 aa12.25□□□□□ -0.45
SGCE-210ENST00000472326 ADAM19Q9H013 955 aa12.25□□□□□ -0.45
SGCE-210ENST00000472326 LIN7BQ9HAP6 207 aa12.25□□□□□ -0.45
SGCE-210ENST00000472326 WWC3Q9ULE0 1092 aa12.25□□□□□ -0.45
SGCE-210ENST00000472326 GADD45BO75293 160 aaPredicted RBP12.24□□□□□ -0.45
SGCE-210ENST00000472326 P4HBP07237 508 aaKnown RBP12.24□□□□□ -0.45
SGCE-210ENST00000472326 KIAA0319Q5VV43 1072 aa12.24□□□□□ -0.45
SGCE-210ENST00000472326 DNAJC14Q6Y2X3 702 aaPredicted RBP12.24□□□□□ -0.45
SGCE-210ENST00000472326 ALYREFQ86V81 257 aaKnown RBP12.24□□□□□ -0.45
SGCE-210ENST00000472326 CACTIN-AS1Q8N1I8 211 aa12.24□□□□□ -0.45
SGCE-210ENST00000472326 TCF12Q99081 682 aa12.24□□□□□ -0.45
SGCE-210ENST00000472326 BHLHE41Q9C0J9 482 aaPredicted RBP12.24□□□□□ -0.45
SGCE-210ENST00000472326 EHD4Q9H223 541 aa12.24□□□□□ -0.45
SGCE-210ENST00000472326 FAM177BA6PVY3 158 aa12.23□□□□□ -0.45
SGCE-210ENST00000472326 SHISA2Q6UWI4 295 aa12.23□□□□□ -0.45
SGCE-210ENST00000472326 CCNJLQ8IV13 435 aa12.23□□□□□ -0.45
SGCE-210ENST00000472326 CARD10Q9BWT7 1032 aa12.23□□□□□ -0.45
SGCE-210ENST00000472326 SOX13Q9UN79 622 aa12.23□□□□□ -0.45
SGCE-210ENST00000472326 ITGB2P05107 769 aa12.22□□□□□ -0.45
SGCE-210ENST00000472326 ELNP15502 786 aa12.22□□□□□ -0.45
SGCE-210ENST00000472326 CHRNA4P43681 627 aa12.22□□□□□ -0.45
SGCE-210ENST00000472326 GRIA4P48058 902 aa12.22□□□□□ -0.45
SGCE-210ENST00000472326 TRIM26Q12899 539 aaPredicted RBP12.22□□□□□ -0.45
SGCE-210ENST00000472326 SETDB1Q15047 1291 aa12.22□□□□□ -0.45
SGCE-210ENST00000472326 FBXO11Q86XK2 927 aa12.22□□□□□ -0.45
SGCE-210ENST00000472326 DTWD1Q8N5C7 304 aa12.22□□□□□ -0.45
SGCE-210ENST00000472326 SPRED3Q2MJR0 410 aa12.21□□□□□ -0.45
SGCE-210ENST00000472326 PLA2G4EQ3MJ16 856 aa12.21□□□□□ -0.45
SGCE-210ENST00000472326 BSNDQ8WZ55 320 aa12.21□□□□□ -0.45
SGCE-210ENST00000472326 MUC3BQ9H195 1237 aa12.21□□□□□ -0.45
SGCE-210ENST00000472326 SELPP16109 830 aa12.2□□□□□ -0.46
SGCE-210ENST00000472326 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.2□□□□□ -0.46
SGCE-210ENST00000472326 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
SGCE-210ENST00000472326 CD163Q86VB7 1156 aa12.2□□□□□ -0.46
SGCE-210ENST00000472326 GALNT11Q8NCW6 608 aa12.2□□□□□ -0.46
SGCE-210ENST00000472326 NLRP2Q9NX02 1062 aa12.2□□□□□ -0.46
SGCE-210ENST00000472326 C1QTNF9BB2RNN3 333 aa12.19□□□□□ -0.46
SGCE-210ENST00000472326 H3BRJ5 948 aa12.19□□□□□ -0.46
SGCE-210ENST00000472326 CABP4P57796 275 aa12.19□□□□□ -0.46
SGCE-210ENST00000472326 GRM2Q14416 872 aa12.19□□□□□ -0.46
SGCE-210ENST00000472326 A0A096LPE4 126 aa12.18□□□□□ -0.46
SGCE-210ENST00000472326 A0A1W2PPZ6 126 aa12.18□□□□□ -0.46
SGCE-210ENST00000472326 FSCN2O14926 492 aa12.18□□□□□ -0.46
SGCE-210ENST00000472326 APBA3O96018 575 aa12.18□□□□□ -0.46
SGCE-210ENST00000472326 HGSNATQ68CP4 663 aa12.18□□□□□ -0.46
SGCE-210ENST00000472326 NPAS4Q8IUM7 802 aa12.18□□□□□ -0.46
SGCE-210ENST00000472326 SLC7A3Q8WY07 619 aa12.18□□□□□ -0.46
SGCE-210ENST00000472326 DLL1O00548 723 aa12.17□□□□□ -0.46
SGCE-210ENST00000472326 FAM117BQ6P1L5 589 aa12.17□□□□□ -0.46
SGCE-210ENST00000472326 LDHBP07195 334 aaKnown RBP12.16□□□□□ -0.46
SGCE-210ENST00000472326 ATP2B2Q01814 1243 aa12.16□□□□□ -0.46
SGCE-210ENST00000472326 TMCO4Q5TGY1 634 aa12.16□□□□□ -0.46
SGCE-210ENST00000472326 GLIS3Q8NEA6 775 aa12.16□□□□□ -0.46
SGCE-210ENST00000472326 ABCB6Q9NP58 842 aa12.16□□□□□ -0.46
SGCE-210ENST00000472326 IKBKEQ14164 716 aa12.15□□□□□ -0.46
SGCE-210ENST00000472326 GPAT2Q6NUI2 795 aa12.15□□□□□ -0.46
SGCE-210ENST00000472326 KLHDC7BQ96G42 594 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms