RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 IFFO2Q5TF58 517 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 BRF1Q92994 677 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 TCEANC2Q96MN5 208 aa12.55□□□□□ -0.4
APLF-204ENST00000471727 TRMT112Q9UI30 125 aaKnown RBP12.55□□□□□ -0.4
APLF-204ENST00000471727 NOL7Q9UMY1 257 aaKnown RBP12.55□□□□□ -0.4
APLF-204ENST00000471727 EVCP57679 992 aa12.54□□□□□ -0.4
APLF-204ENST00000471727 STK3Q13188 491 aa12.54□□□□□ -0.4
APLF-204ENST00000471727 CDC37L1Q7L3B6 337 aa12.54□□□□□ -0.4
APLF-204ENST00000471727 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
APLF-204ENST00000471727 ZNF34Q8IZ26 560 aa12.54□□□□□ -0.4
APLF-204ENST00000471727 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
APLF-204ENST00000471727 DDX19AQ9NUU7 478 aaKnown RBP12.54□□□□□ -0.4
APLF-204ENST00000471727 CCDC9Q9Y3X0 531 aaKnown RBP12.54□□□□□ -0.4
APLF-204ENST00000471727 MROH5Q6ZUA9 1318 aa12.53□□□□□ -0.4
APLF-204ENST00000471727 DHX16O60231 1041 aaKnown RBP12.53□□□□□ -0.4
APLF-204ENST00000471727 HLFQ16534 295 aa12.53□□□□□ -0.4
APLF-204ENST00000471727 WASHC4Q2M389 1173 aa12.53□□□□□ -0.4
APLF-204ENST00000471727 PARP10Q53GL7 1025 aa12.53□□□□□ -0.4
APLF-204ENST00000471727 STOX1Q6ZVD7 989 aa12.53□□□□□ -0.4
APLF-204ENST00000471727 OSBP2Q969R2 916 aa12.53□□□□□ -0.4
APLF-204ENST00000471727 SPATA32Q96LK8 384 aa12.53□□□□□ -0.4
APLF-204ENST00000471727 PDE8BO95263 885 aa12.52□□□□□ -0.4
APLF-204ENST00000471727 CCDC192P0DO97 292 aa12.52□□□□□ -0.4
APLF-204ENST00000471727 SCRN1Q12765 414 aa12.52□□□□□ -0.4
APLF-204ENST00000471727 UBE3CQ15386 1083 aa12.52□□□□□ -0.4
APLF-204ENST00000471727 TTC6Q86TZ1 520 aa12.52□□□□□ -0.4
APLF-204ENST00000471727 ZBTB1Q9Y2K1 713 aa12.52□□□□□ -0.4
APLF-204ENST00000471727 M0R2C6 588 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 ADORA1P30542 326 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 ZAP70P43403 619 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 EIF5P55010 431 aaKnown RBP12.51□□□□□ -0.41
APLF-204ENST00000471727 RESTQ13127 1097 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 NSUN7Q8NE18 718 aaKnown RBP12.51□□□□□ -0.41
APLF-204ENST00000471727 LEO1Q8WVC0 666 aaPredicted RBP12.51□□□□□ -0.41
APLF-204ENST00000471727 LPIN2Q92539 896 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 ZNF396Q96N95 335 aaPredicted RBP12.51□□□□□ -0.41
APLF-204ENST00000471727 SLC4A9Q96Q91 983 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 FUCA2Q9BTY2 467 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 GREM2Q9H772 168 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 TBC1D2BQ9UPU7 963 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 RIC1Q4ADV7 1423 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 ITGB4P16144 1822 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 ZNF213O14771 459 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 ZNF500O60304 480 aaPredicted RBP12.51□□□□□ -0.41
APLF-204ENST00000471727 GPTP24298 496 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
APLF-204ENST00000471727 COL9A3Q14050 684 aaPredicted RBP12.51□□□□□ -0.41
APLF-204ENST00000471727 VGLL2Q8N8G2 317 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 RNF214Q8ND24 703 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 NCOA7Q8NI08 942 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 NUP62CLQ9H1M0 184 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 ZKSCAN5Q9Y2L8 839 aa12.51□□□□□ -0.41
APLF-204ENST00000471727 JAK2O60674 1132 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 CAVIN2O95810 425 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 FGAP02671 866 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 CHGBP05060 677 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 PDIA3P30101 505 aaKnown RBP12.5□□□□□ -0.41
APLF-204ENST00000471727 ADD2P35612 726 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 APOBRQ0VD83 1088 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 PUM3Q15397 648 aaKnown RBP12.5□□□□□ -0.41
APLF-204ENST00000471727 DDB1Q16531 1140 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 FERMT3Q86UX7 667 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 SMARCC1Q92922 1105 aaPredicted RBP12.5□□□□□ -0.41
APLF-204ENST00000471727 CCDC87Q9NVE4 849 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 ATRNO75882 1429 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 SPATA31A1Q5TZJ5 1347 aa12.5□□□□□ -0.41
APLF-204ENST00000471727 PTPDC1A2A3K4 754 aa12.49□□□□□ -0.41
APLF-204ENST00000471727 RGL2O15211 777 aa12.49□□□□□ -0.41
APLF-204ENST00000471727 GPAA1O43292 621 aa12.49□□□□□ -0.41
APLF-204ENST00000471727 TPM3P06753 285 aa12.49□□□□□ -0.41
APLF-204ENST00000471727 SLC5A1P13866 664 aa12.49□□□□□ -0.41
APLF-204ENST00000471727 TRDNQ13061 729 aa12.49□□□□□ -0.41
APLF-204ENST00000471727 RALYLQ86SE5 291 aaKnown RBP12.49□□□□□ -0.41
APLF-204ENST00000471727 SYTL4Q96C24 671 aaPredicted RBP12.49□□□□□ -0.41
APLF-204ENST00000471727 UTP14AQ9BVJ6 771 aaKnown RBP12.49□□□□□ -0.41
APLF-204ENST00000471727 SALL1Q9NSC2 1324 aa12.49□□□□□ -0.41
APLF-204ENST00000471727 RTL9Q8NET4 1388 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 CTAGE5O15320 804 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 KDM4AO75164 1064 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 PTMAP06454 111 aaKnown RBP12.48□□□□□ -0.41
APLF-204ENST00000471727 FGFR2P21802 821 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 MCAMP43121 646 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 MAPK8IP2Q13387 824 aaPredicted RBP12.48□□□□□ -0.41
APLF-204ENST00000471727 ALX1Q15699 326 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.48□□□□□ -0.41
APLF-204ENST00000471727 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
APLF-204ENST00000471727 RCOR1Q9UKL0 485 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 ZMYM6O95789 1325 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 ANKRD36CQ5JPF3 1778 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 TCHHQ07283 1943 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 TERF1P54274 439 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 SCARF1Q14162 830 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 CCDC152Q4G0S7 254 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 GIMAP6Q6P9H5 292 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 RBM43Q6ZSC3 357 aaKnown RBP12.48□□□□□ -0.41
APLF-204ENST00000471727 BARGINQ6ZT62 677 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 MB21D2Q8IYB1 491 aaPredicted RBP12.48□□□□□ -0.41
APLF-204ENST00000471727 LRRC2Q9BYS8 371 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 PUS7LQ9H0K6 701 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms