RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ATRIPQ8WXE1 791 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 PPANQ9NQ55 473 aaKnown RBP14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 DYNC1I1O14576 645 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 KIF3CO14782 793 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 TNNI2P48788 182 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 MAEAQ7L5Y9 396 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 TTC12Q9H892 705 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 FAM83GA6ND36 823 aa14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 TRIM6Q9C030 488 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 CGNQ9P2M7 1197 aaKnown RBP14.99□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 CFAP157Q5JU67 520 aa14.98□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 XRCC6P12956 609 aaKnown RBP eCLIP14.98□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 MCM7P33993 719 aa14.98□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 SMC6Q96SB8 1091 aa14.98□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 AGTPBP1Q9UPW5 1226 aa14.98□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 MCM9Q9NXL9 1143 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ATP6V0A2Q9Y487 856 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 TLDC2A0PJX2 215 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 KANK3Q6NY19 840 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ATAD2Q6PL18 1390 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 FAM160A1Q05DH4 1040 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 FGD5Q6ZNL6 1462 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 KCNK9Q9NPC2 374 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 PARP3Q9Y6F1 533 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 MNAT1P51948 309 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 IFNL2Q8IZJ0 200 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ZNF830Q96NB3 372 aaPredicted RBP14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 PSMD6Q15008 389 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ESR2Q92731 530 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 DHX58Q96C10 678 aa14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 SAP30BPQ9UHR5 308 aaKnown RBP14.97□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 RXRAP19793 462 aa14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 NOP9Q86U38 636 aaKnown RBP14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ZSCAN30Q86W11 494 aa14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 MIPOL1Q8TD10 442 aa14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 DACT3Q96B18 629 aaPredicted RBP14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 LRRC27Q9C0I9 530 aa14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ANKRD13DQ6ZTN6 518 aa14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ACRBPQ8NEB7 543 aa14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 PRG4Q92954 1404 aaPredicted RBP14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ATP2A1O14983 1001 aa14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 WHAMMQ8TF30 809 aa14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 RASAL2Q9UJF2 1139 aa14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 TOP2AP11388 1531 aaKnown RBP14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 ECHDC1Q9NTX5 307 aa14.96□□□□□ -0.01
NPHP3-ACAD11-201ENST00000471702 B4DLN1 442 aa14.96□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 DAPK3O43293 454 aa14.96□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 CHMP2AO43633 222 aa14.96□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 MRPL12P52815 198 aaKnown RBP14.96□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 EIF6P56537 245 aaKnown RBP14.96□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 ANKRD24Q8TF21 1146 aa14.96□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 ANO3Q9BYT9 981 aa14.96□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 ZGPATQ8N5A5 531 aaKnown RBP14.96□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 C9orf84Q5VXU9 1444 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 E7EVH7 732 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 GSDMBQ8TAX9 411 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 RAPGEF1Q13905 1077 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 ZNF804AQ7Z570 1209 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 PSPC1Q8WXF1 523 aaKnown RBP14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 IFT81Q8WYA0 676 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 ERCC3P19447 782 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 NAA25Q14CX7 972 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 PPP1R7Q15435 360 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 CFTRP13569 1480 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 BIRC3Q13489 604 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 STX17P56962 302 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 SLC9C2Q5TAH2 1124 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 NCAPGQ9BPX3 1015 aa14.95□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 HSPA4P34932 840 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 MAGEB6Q8N7X4 407 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 CABLES1Q8TDN4 633 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 RMND1Q9NWS8 449 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 GSDMDP57764 484 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 BRF1Q92994 677 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 ZEB2O60315 1214 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 AFG3L2Q9Y4W6 797 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 MAGEB6P1A0A0J9YX57 407 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 PPP4R3BQ5MIZ7 849 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 ZKSCAN3Q9BRR0 538 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 TEX13AQ9BXU3 409 aaPredicted RBP14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 CYLC1P35663 651 aaPredicted RBP14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 TRIM7Q9C029 511 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 PICK1Q9NRD5 415 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 HSPA1LP34931 641 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 FCHSD1Q86WN1 690 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 CHPF2Q9P2E5 772 aa14.94□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 HGSO14964 777 aaPredicted RBP14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 C20orf194Q5TEA3 1177 aa14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 SEPT14Q6ZU15 432 aa14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 TBC1D31Q96DN5 1066 aa14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 KRT23Q9C075 422 aa14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 CCDC169A6NNP5 214 aa14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 SNRPA1P09661 255 aaKnown RBP14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 RTCBQ9Y3I0 505 aaKnown RBP14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 HCLS1P14317 486 aaPredicted RBP14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 EAPPQ56P03 285 aaPredicted RBP14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 HS2ST1Q7LGA3 356 aa14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 NCOA2Q15596 1464 aa14.93□□□□□ -0.02
NPHP3-ACAD11-201ENST00000471702 NOP56O00567 594 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms