RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 FAM114A1Q8IWE2 563 aa9.8□□□□□ -0.84
CD47-204ENST00000471694 TRPM2O94759 1503 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 URB2Q14146 1524 aaKnown RBP9.79□□□□□ -0.84
CD47-204ENST00000471694 TOP2BQ02880 1626 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 DDX39AO00148 427 aaKnown RBP9.79□□□□□ -0.84
CD47-204ENST00000471694 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
CD47-204ENST00000471694 ABL1P00519 1130 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 FBLN1P23142 703 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 SNX16P57768 344 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 NSMFQ6X4W1 530 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 CCDC129Q6ZRS4 1044 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 CCDC172P0C7W6 258 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 STRN3Q13033 797 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 RAB3IL1Q8TBN0 382 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 IL15P40933 162 aaPredicted RBP9.79□□□□□ -0.84
CD47-204ENST00000471694 DOK7Q18PE1 504 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 DYDC1Q8WWB3 177 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 C14orf93Q9H972 538 aaKnown RBP9.79□□□□□ -0.84
CD47-204ENST00000471694 YTHDC2Q9H6S0 1430 aaKnown RBP9.79□□□□□ -0.84
CD47-204ENST00000471694 ZFYP08048 801 aaPredicted RBP9.79□□□□□ -0.84
CD47-204ENST00000471694 MICAL1Q8TDZ2 1067 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 IFT74Q96LB3 600 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 NUP88Q99567 741 aaPredicted RBP9.79□□□□□ -0.84
CD47-204ENST00000471694 AP5M1Q9H0R1 490 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 GAS8O95995 478 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 ABI1Q8IZP0 508 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 KIFC2Q96AC6 838 aa9.79□□□□□ -0.84
CD47-204ENST00000471694 TMTC2Q8N394 836 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 PUS7Q96PZ0 661 aaKnown RBP9.78□□□□□ -0.84
CD47-204ENST00000471694 PYM1Q9BRP8 204 aaKnown RBP9.78□□□□□ -0.84
CD47-204ENST00000471694 NUP62CLQ9H1M0 184 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 CCDC169A6NNP5 214 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 MCM5P33992 734 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 ECHDC1Q9NTX5 307 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 STAT6P42226 847 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 METTL13Q8N6R0 699 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 TTC12Q9H892 705 aaPredicted RBP9.78□□□□□ -0.84
CD47-204ENST00000471694 INCENPQ9NQS7 918 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 SBNO2Q9Y2G9 1366 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 UBE4AQ14139 1066 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 MLXIPQ9HAP2 919 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 NPATQ14207 1427 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 YEATS2Q9ULM3 1422 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 SORBS3O60504 671 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 ELMSAN1Q6PJG2 1045 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 PANK2Q9BZ23 570 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 ODF2LQ9ULJ1 636 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 CD2APQ9Y5K6 639 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 RTL9Q8NET4 1388 aa9.78□□□□□ -0.84
CD47-204ENST00000471694 GRM8O00222 908 aa9.77□□□□□ -0.84
CD47-204ENST00000471694 EEF2P13639 858 aaKnown RBP9.77□□□□□ -0.84
CD47-204ENST00000471694 ARHGAP29Q52LW3 1261 aa9.77□□□□□ -0.84
CD47-204ENST00000471694 FERMT3Q86UX7 667 aa9.77□□□□□ -0.84
CD47-204ENST00000471694 NLGN1Q8N2Q7 840 aa9.77□□□□□ -0.84
CD47-204ENST00000471694 ZBTB43O43298 467 aa9.77□□□□□ -0.84
CD47-204ENST00000471694 USH1GQ495M9 461 aa9.77□□□□□ -0.84
CD47-204ENST00000471694 FAM182BQ5T319 152 aa9.77□□□□□ -0.84
CD47-204ENST00000471694 RAD50Q92878 1312 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 PPFIA3O75145 1194 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 CAMK4Q16566 473 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 ABCA10Q8WWZ4 1543 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 PSDA5PKW4 1024 aaPredicted RBP9.77□□□□□ -0.85
CD47-204ENST00000471694 CCNA1P78396 465 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 ALDH1L2Q3SY69 923 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 FNBP1Q96RU3 617 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 TRPC6Q9Y210 931 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 TSPOAP1O95153 1857 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 RNMTO43148 476 aaKnown RBP9.77□□□□□ -0.85
CD47-204ENST00000471694 GTF2IP78347 998 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 LUZP1Q86V48 1076 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 WDR66Q8TBY9 1149 aa9.77□□□□□ -0.85
CD47-204ENST00000471694 SREK1Q8WXA9 508 aaKnown RBP9.77□□□□□ -0.85
CD47-204ENST00000471694 DDX23Q9BUQ8 820 aaKnown RBP9.77□□□□□ -0.85
CD47-204ENST00000471694 ABCC11Q96J66 1382 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 TRPC3Q13507 836 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 TAOK3Q9H2K8 898 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 IKBKGQ9Y6K9 419 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 DKC1O60832 514 aaKnown RBP eCLIP9.76□□□□□ -0.85
CD47-204ENST00000471694 CCDC175P0C221 793 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 CALML3P27482 149 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 GLG1Q92896 1179 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 USO1O60763 962 aaKnown RBP9.76□□□□□ -0.85
CD47-204ENST00000471694 KSR2Q6VAB6 950 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 TMEM110-MUSTN1A8MSY1 372 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 ITGA6P23229 1130 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 MARCKSP29966 332 aaPredicted RBP9.76□□□□□ -0.85
CD47-204ENST00000471694 NOP9Q86U38 636 aaKnown RBP9.76□□□□□ -0.85
CD47-204ENST00000471694 SLC10A4Q96EP9 437 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 USP40Q9NVE5 1235 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 ORC3Q9UBD5 711 aaPredicted RBP9.76□□□□□ -0.85
CD47-204ENST00000471694 TTF2Q9UNY4 1162 aaKnown RBP9.76□□□□□ -0.85
CD47-204ENST00000471694 PDE8AO60658 829 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 ZBTB7AO95365 584 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 ARHGEF16Q5VV41 709 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 PPP1R14CQ8TAE6 165 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.76□□□□□ -0.85
CD47-204ENST00000471694 FTOQ9C0B1 505 aaKnown RBP eCLIP9.76□□□□□ -0.85
CD47-204ENST00000471694 SH3TC1Q8TE82 1336 aa9.76□□□□□ -0.85
CD47-204ENST00000471694 PTPN23Q9H3S7 1636 aa9.75□□□□□ -0.85
CD47-204ENST00000471694 GOLGA6L7A0A1B0GV03 622 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms