RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 USP17L4A6NCW7 530 aa19.49■□□□□ 0.71
COL1A1-203ENST00000471344 E9PSI1 815 aa19.49■□□□□ 0.71
COL1A1-203ENST00000471344 SLFN5Q08AF3 891 aa19.49■□□□□ 0.71
COL1A1-203ENST00000471344 CDC37L1Q7L3B6 337 aa19.49■□□□□ 0.71
COL1A1-203ENST00000471344 USP17L1Q7RTZ2 530 aa19.49■□□□□ 0.71
COL1A1-203ENST00000471344 HELBQ8NG08 1087 aaPredicted RBP19.49■□□□□ 0.71
COL1A1-203ENST00000471344 GGA3Q9NZ52 723 aa19.49■□□□□ 0.71
COL1A1-203ENST00000471344 ZNF804BA4D1E1 1349 aa19.49■□□□□ 0.71
COL1A1-203ENST00000471344 TAF5LO75529 589 aa19.48■□□□□ 0.71
COL1A1-203ENST00000471344 ZNF280AP59817 542 aaPredicted RBP19.48■□□□□ 0.71
COL1A1-203ENST00000471344 KRT26Q7Z3Y9 468 aa19.48■□□□□ 0.71
COL1A1-203ENST00000471344 PODNQ7Z5L7 613 aa19.48■□□□□ 0.71
COL1A1-203ENST00000471344 SAPCD2Q86UD0 394 aa19.48■□□□□ 0.71
COL1A1-203ENST00000471344 SSH1Q8WYL5 1049 aa19.48■□□□□ 0.71
COL1A1-203ENST00000471344 FBXW7Q969H0 707 aa19.48■□□□□ 0.71
COL1A1-203ENST00000471344 SRCIN1Q9C0H9 1055 aa19.48■□□□□ 0.71
COL1A1-203ENST00000471344 LEMD3Q9Y2U8 911 aa19.48■□□□□ 0.71
COL1A1-203ENST00000471344 AOC2O75106 756 aa19.47■□□□□ 0.71
COL1A1-203ENST00000471344 IFIT5Q13325 482 aaKnown RBP19.47■□□□□ 0.71
COL1A1-203ENST00000471344 DACT2Q5SW24 774 aa19.47■□□□□ 0.71
COL1A1-203ENST00000471344 AGBL3Q8NEM8 1001 aa19.47■□□□□ 0.71
COL1A1-203ENST00000471344 KAZALD1Q96I82 304 aa19.47■□□□□ 0.71
COL1A1-203ENST00000471344 SUCLG2Q96I99 432 aa19.47■□□□□ 0.71
COL1A1-203ENST00000471344 WBP1LQ9NX94 342 aa19.47■□□□□ 0.71
COL1A1-203ENST00000471344 C9orf78Q9NZ63 289 aaPredicted RBP19.47■□□□□ 0.71
COL1A1-203ENST00000471344 SCAF8Q9UPN6 1271 aaKnown RBP19.47■□□□□ 0.71
COL1A1-203ENST00000471344 IRS2Q9Y4H2 1338 aa19.47■□□□□ 0.71
COL1A1-203ENST00000471344 ALDH1L1O75891 902 aa19.46■□□□□ 0.71
COL1A1-203ENST00000471344 NBPF7P0C2Y1 421 aaPredicted RBP19.46■□□□□ 0.71
COL1A1-203ENST00000471344 ANKRD2Q9GZV1 360 aa19.46■□□□□ 0.71
COL1A1-203ENST00000471344 USP17L8P0C7I0 530 aa19.45■□□□□ 0.7
COL1A1-203ENST00000471344 SCARF1Q14162 830 aa19.45■□□□□ 0.7
COL1A1-203ENST00000471344 TNS4Q8IZW8 715 aa19.45■□□□□ 0.7
COL1A1-203ENST00000471344 DCPSQ96C86 337 aaKnown RBP19.45■□□□□ 0.7
COL1A1-203ENST00000471344 COA1Q9GZY4 146 aa19.45■□□□□ 0.7
COL1A1-203ENST00000471344 MYOZ2Q9NPC6 264 aa19.45■□□□□ 0.7
COL1A1-203ENST00000471344 KCNJ4P48050 445 aa19.44■□□□□ 0.7
COL1A1-203ENST00000471344 ANGEL2Q5VTE6 544 aaKnown RBP19.44■□□□□ 0.7
COL1A1-203ENST00000471344 AIDAQ96BJ3 306 aa19.43■□□□□ 0.7
COL1A1-203ENST00000471344 PLIN1O60240 522 aa19.42■□□□□ 0.7
COL1A1-203ENST00000471344 ECE1P42892 770 aa19.42■□□□□ 0.7
COL1A1-203ENST00000471344 CCDC57Q2TAC2 916 aa19.42■□□□□ 0.7
COL1A1-203ENST00000471344 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
COL1A1-203ENST00000471344 STRIP1Q5VSL9 837 aa19.42■□□□□ 0.7
COL1A1-203ENST00000471344 TRMT2AQ8IZ69 625 aaKnown RBP19.42■□□□□ 0.7
COL1A1-203ENST00000471344 PUS3Q9BZE2 481 aaKnown RBP19.42■□□□□ 0.7
COL1A1-203ENST00000471344 BICC1Q9H694 974 aaKnown RBP19.42■□□□□ 0.7
COL1A1-203ENST00000471344 UTYO14607 1347 aa19.42■□□□□ 0.7
COL1A1-203ENST00000471344 CCER2I3L3R5 266 aa19.41■□□□□ 0.7
COL1A1-203ENST00000471344 HSPA8P11142 646 aaKnown RBP19.41■□□□□ 0.7
COL1A1-203ENST00000471344 CTCFP49711 727 aaPredicted RBP19.41■□□□□ 0.7
COL1A1-203ENST00000471344 LBX1P52954 281 aa19.41■□□□□ 0.7
COL1A1-203ENST00000471344 HUNKP57058 714 aa19.41■□□□□ 0.7
COL1A1-203ENST00000471344 GTF2IP78347 998 aa19.41■□□□□ 0.7
COL1A1-203ENST00000471344 TAF7LQ5H9L4 462 aa19.41■□□□□ 0.7
COL1A1-203ENST00000471344 LDHAL6AQ6ZMR3 332 aa19.41■□□□□ 0.7
COL1A1-203ENST00000471344 SULF1Q8IWU6 871 aa19.41■□□□□ 0.7
COL1A1-203ENST00000471344 CDCA5Q96FF9 252 aa19.41■□□□□ 0.7
COL1A1-203ENST00000471344 ZIC5Q96T25 663 aa19.41■□□□□ 0.7
COL1A1-203ENST00000471344 CD209Q9NNX6 404 aa19.41■□□□□ 0.7
COL1A1-203ENST00000471344 PTPRCP08575 1304 aa19.41■□□□□ 0.7
COL1A1-203ENST00000471344 CAPN15O75808 1086 aa19.4■□□□□ 0.7
COL1A1-203ENST00000471344 SASH1O94885 1247 aa19.4■□□□□ 0.7
COL1A1-203ENST00000471344 TTLL5Q6EMB2 1281 aa19.4■□□□□ 0.7
COL1A1-203ENST00000471344 KIAA0825Q8IV33 1275 aa19.4■□□□□ 0.7
COL1A1-203ENST00000471344 CERS5Q8N5B7 392 aa19.4■□□□□ 0.7
COL1A1-203ENST00000471344 ANKRD44Q8N8A2 993 aa19.4■□□□□ 0.7
COL1A1-203ENST00000471344 GBA2Q9HCG7 927 aaPredicted RBP19.4■□□□□ 0.7
COL1A1-203ENST00000471344 CNNM1Q9NRU3 951 aa19.4■□□□□ 0.7
COL1A1-203ENST00000471344 MAP2K1Q02750 393 aaPredicted RBP19.39■□□□□ 0.69
COL1A1-203ENST00000471344 HHIPL1Q96JK4 782 aa19.39■□□□□ 0.69
COL1A1-203ENST00000471344 SMC4Q9NTJ3 1288 aa19.39■□□□□ 0.69
COL1A1-203ENST00000471344 TSKSQ9UJT2 592 aa19.39■□□□□ 0.69
COL1A1-203ENST00000471344 JAG2Q9Y219 1238 aa19.39■□□□□ 0.69
COL1A1-203ENST00000471344 PRAMEF18Q5VWM3 479 aa19.38■□□□□ 0.69
COL1A1-203ENST00000471344 C15orf52Q6ZUT6 534 aaKnown RBP19.38■□□□□ 0.69
COL1A1-203ENST00000471344 MYO3BQ8WXR4 1341 aa19.38■□□□□ 0.69
COL1A1-203ENST00000471344 WNT10BO00744 389 aa19.37■□□□□ 0.69
COL1A1-203ENST00000471344 RABL6Q3YEC7 729 aaPredicted RBP19.37■□□□□ 0.69
COL1A1-203ENST00000471344 KLHDC4Q8TBB5 520 aa19.37■□□□□ 0.69
COL1A1-203ENST00000471344 USP44Q9H0E7 712 aa19.37■□□□□ 0.69
COL1A1-203ENST00000471344 PCDHAC2Q9Y5I4 1007 aa19.37■□□□□ 0.69
COL1A1-203ENST00000471344 PITPNM2Q9BZ72 1349 aa19.36■□□□□ 0.69
COL1A1-203ENST00000471344 ALDH1L2Q3SY69 923 aa19.36■□□□□ 0.69
COL1A1-203ENST00000471344 LRRC24Q50LG9 513 aa19.36■□□□□ 0.69
COL1A1-203ENST00000471344 PRDM10Q9NQV6 1147 aa19.36■□□□□ 0.69
COL1A1-203ENST00000471344 FAM155AB1AL88 458 aaPredicted RBP19.35■□□□□ 0.69
COL1A1-203ENST00000471344 IL1R1P14778 569 aa19.35■□□□□ 0.69
COL1A1-203ENST00000471344 MAP2K2P36507 400 aa19.35■□□□□ 0.69
COL1A1-203ENST00000471344 MOB2Q70IA6 237 aa19.35■□□□□ 0.69
COL1A1-203ENST00000471344 ZNF804AQ7Z570 1209 aa19.35■□□□□ 0.69
COL1A1-203ENST00000471344 OGFOD1Q8N543 542 aa19.35■□□□□ 0.69
COL1A1-203ENST00000471344 C2orf69Q8N8R5 385 aa19.35■□□□□ 0.69
COL1A1-203ENST00000471344 RIPOR2Q9Y4F9 1068 aa19.35■□□□□ 0.69
COL1A1-203ENST00000471344 PAPPA2Q9BXP8 1791 aa19.34■□□□□ 0.69
COL1A1-203ENST00000471344 AOX1Q06278 1338 aa19.34■□□□□ 0.69
COL1A1-203ENST00000471344 F8W031 263 aaPredicted RBP19.34■□□□□ 0.69
COL1A1-203ENST00000471344 GYG1P46976 350 aa19.34■□□□□ 0.69
COL1A1-203ENST00000471344 RGMBQ6NW40 437 aa19.34■□□□□ 0.69
COL1A1-203ENST00000471344 ZBED3Q96IU2 234 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms