RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 ABTB2Q8N961 1025 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 DNAJC25Q9H1X3 360 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 DNMT3AQ9Y6K1 912 aaPredicted RBP3.75□□□□□ -1.81
CCNL1-214ENST00000471247 NKTRP30414 1462 aaKnown RBP3.75□□□□□ -1.81
CCNL1-214ENST00000471247 CFAP65Q6ZU64 1925 aaKnown RBP3.75□□□□□ -1.81
CCNL1-214ENST00000471247 TREHO43280 583 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 MFAP1P55081 439 aaKnown RBP3.75□□□□□ -1.81
CCNL1-214ENST00000471247 ZNF326Q5BKZ1 582 aaKnown RBP3.75□□□□□ -1.81
CCNL1-214ENST00000471247 COX20Q5RI15 118 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 FAM182BQ5T319 152 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 RNF217Q8TC41 542 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 PNNQ9H307 717 aaKnown RBP3.75□□□□□ -1.81
CCNL1-214ENST00000471247 TLL2Q9Y6L7 1015 aa3.75□□□□□ -1.81
CCNL1-214ENST00000471247 SBF2Q86WG5 1849 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 E9PSI1 815 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 GIPC1O14908 333 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 CANXP27824 592 aaKnown RBP3.74□□□□□ -1.81
CCNL1-214ENST00000471247 MRPL58Q14197 206 aaKnown RBP3.74□□□□□ -1.81
CCNL1-214ENST00000471247 CHMP4AQ9BY43 222 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 ARAP2Q8WZ64 1704 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 BCORQ6W2J9 1755 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 PTCH1Q13635 1447 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 VEGFBP49765 207 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 C16orf46Q6P387 395 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 AEBP1Q8IUX7 1158 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 SLC9A9Q8IVB4 645 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 ATP7BP35670 1465 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 EFSO43281 561 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 APPP05067 770 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 OXLD1Q5BKU9 147 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 PRKD2Q9BZL6 878 aa3.74□□□□□ -1.81
CCNL1-214ENST00000471247 AGERQ15109 404 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 DEPDC4Q8N2C3 294 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 TPCN2Q8NHX9 752 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 FBF1Q8TES7 1133 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 C8orf37Q96NL8 207 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 CARD14Q9BXL6 1004 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 WASHC2AQ641Q2 1341 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 ZNF521Q96K83 1311 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 MTUS2Q5JR59 1369 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 ANKRD30AQ9BXX3 1397 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 MAGEB6P1A0A0J9YX57 407 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 PTPN12Q05209 780 aaKnown RBP3.73□□□□□ -1.81
CCNL1-214ENST00000471247 TMCO4Q5TGY1 634 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 KIFC2Q96AC6 838 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 GZF1Q9H116 711 aaPredicted RBP3.73□□□□□ -1.81
CCNL1-214ENST00000471247 DYRK1BQ9Y463 629 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 PNPLA6Q8IY17 1366 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 VSIG8P0DPA2 414 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 LDLRAD1Q5T700 205 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 NBPF10Q6P3W6 841 aaKnown RBP3.73□□□□□ -1.81
CCNL1-214ENST00000471247 PURBQ96QR8 312 aaKnown RBP3.73□□□□□ -1.81
CCNL1-214ENST00000471247 HIRIP3Q9BW71 556 aaPredicted RBP3.73□□□□□ -1.81
CCNL1-214ENST00000471247 STIM2Q9P246 746 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 ANKIB1Q9P2G1 1089 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 BCS1LQ9Y276 419 aa3.73□□□□□ -1.81
CCNL1-214ENST00000471247 LTBP4Q8N2S1 1624 aa3.72□□□□□ -1.81
CCNL1-214ENST00000471247 VGLL3A8MV65 326 aa3.72□□□□□ -1.81
CCNL1-214ENST00000471247 ZIC2O95409 532 aaPredicted RBP3.72□□□□□ -1.81
CCNL1-214ENST00000471247 MZF1P28698 734 aaPredicted RBP3.72□□□□□ -1.81
CCNL1-214ENST00000471247 DNTTIP2Q5QJE6 756 aaKnown RBP3.72□□□□□ -1.81
CCNL1-214ENST00000471247 ANP32BQ92688 251 aaKnown RBP3.72□□□□□ -1.81
CCNL1-214ENST00000471247 FAM13BQ9NYF5 915 aa3.72□□□□□ -1.81
CCNL1-214ENST00000471247 SERTM1A2A2V5 107 aa3.72□□□□□ -1.81
CCNL1-214ENST00000471247 SLC35F4A4IF30 521 aa3.72□□□□□ -1.81
CCNL1-214ENST00000471247 J3QL48 77 aa3.72□□□□□ -1.81
CCNL1-214ENST00000471247 RGS3P49796 1198 aa3.72□□□□□ -1.81
CCNL1-214ENST00000471247 CYP4X1Q8N118 509 aa3.72□□□□□ -1.81
CCNL1-214ENST00000471247 TSEN2Q8NCE0 465 aaKnown RBP3.72□□□□□ -1.81
CCNL1-214ENST00000471247 ZIC5Q96T25 663 aa3.72□□□□□ -1.81
CCNL1-214ENST00000471247 AVENQ9NQS1 362 aaPredicted RBP3.72□□□□□ -1.81
CCNL1-214ENST00000471247 HNRNPUQ00839 825 aaKnown RBP eCLIP3.72□□□□□ -1.81
CCNL1-214ENST00000471247 SCARA3Q6AZY7 606 aa3.72□□□□□ -1.81
CCNL1-214ENST00000471247 TRIM46Q7Z4K8 759 aa3.72□□□□□ -1.81
CCNL1-214ENST00000471247 GTF3C2Q8WUA4 911 aaPredicted RBP3.72□□□□□ -1.81
CCNL1-214ENST00000471247 YTHDC2Q9H6S0 1430 aaKnown RBP3.72□□□□□ -1.81
CCNL1-214ENST00000471247 ITGB4P16144 1822 aa3.71□□□□□ -1.81
CCNL1-214ENST00000471247 LY75O60449 1722 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 MRC1P22897 1456 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 CCDC7Q96M83 1385 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 MAP3K6O95382 1288 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 FAM157BP0CG42 384 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 ATP4AP20648 1035 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 USP5P45974 858 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 HPS1Q92902 700 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 TRIM44Q96DX7 344 aaPredicted RBP3.71□□□□□ -1.82
CCNL1-214ENST00000471247 CFHR5Q9BXR6 569 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 ESF1Q9H501 851 aaKnown RBP3.71□□□□□ -1.82
CCNL1-214ENST00000471247 LRRC4BQ9NT99 713 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 ZHX1Q9UKY1 873 aaPredicted RBP3.71□□□□□ -1.82
CCNL1-214ENST00000471247 LRFN2Q9ULH4 789 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 USP3Q9Y6I4 520 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 TAF1LQ8IZX4 1826 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 NWD2Q9ULI1 1742 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 LRP6O75581 1613 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 TGFBR3LH3BV60 316 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 ENOX2Q16206 610 aaKnown RBP3.71□□□□□ -1.82
CCNL1-214ENST00000471247 TNS4Q8IZW8 715 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 CNKSR1Q969H4 720 aa3.71□□□□□ -1.82
CCNL1-214ENST00000471247 ITPKCQ96DU7 683 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms