RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 CNNM3Q8NE01 707 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 VEZTQ9HBM0 779 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 RBM28Q9NW13 759 aaKnown RBP10.92□□□□□ -0.66
UBE3C-205ENST00000470408 MCM9Q9NXL9 1143 aa10.92□□□□□ -0.66
UBE3C-205ENST00000470408 GNA11P29992 359 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 ZNF496Q96IT1 587 aaPredicted RBP10.91□□□□□ -0.66
UBE3C-205ENST00000470408 CCT2P78371 535 aaKnown RBP10.91□□□□□ -0.66
UBE3C-205ENST00000470408 CCDC82Q8N4S0 544 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 CALCOCO1Q9P1Z2 691 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 CGNQ9P2M7 1197 aaKnown RBP10.91□□□□□ -0.66
UBE3C-205ENST00000470408 CLASP1Q7Z460 1538 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 BRF1Q92994 677 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 PCDHB15Q9Y5E8 787 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 CCDC171Q6TFL3 1326 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 WDR17Q8IZU2 1322 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 EPB41L2O43491 1005 aaKnown RBP10.91□□□□□ -0.66
UBE3C-205ENST00000470408 GCKRQ14397 625 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 PPP2R5BQ15173 497 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 RRP36Q96EU6 259 aaKnown RBP10.91□□□□□ -0.66
UBE3C-205ENST00000470408 FAM89AQ96GI7 184 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 VAT1LQ9HCJ6 419 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 A2ML1A8K2U0 1454 aa10.91□□□□□ -0.66
UBE3C-205ENST00000470408 GJB2P29033 226 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 KCNG4Q8TDN1 519 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 LGR6Q9HBX8 967 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 F8W031 263 aaPredicted RBP10.9□□□□□ -0.66
UBE3C-205ENST00000470408 DYNC1I1O14576 645 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 CNKSR1Q969H4 720 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 QTRT2Q9H974 415 aaKnown RBP10.9□□□□□ -0.66
UBE3C-205ENST00000470408 PA2G4Q9UQ80 394 aaKnown RBP10.9□□□□□ -0.66
UBE3C-205ENST00000470408 CCDC102BQ68D86 513 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 MAGEB6Q8N7X4 407 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 TBC1D32Q96NH3 1257 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 USP6P35125 1406 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 TET3O43151 1660 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 IGHDP01880 384 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 CCDC181Q5TID7 509 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 JAKMIP3Q5VZ66 844 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 TEX11Q8IYF3 940 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 SMARCC2Q8TAQ2 1214 aa10.9□□□□□ -0.66
UBE3C-205ENST00000470408 TBCAO75347 108 aaKnown RBP10.89□□□□□ -0.67
UBE3C-205ENST00000470408 SSFA2P28290 1259 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 RXRBP28702 533 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 PICALMQ13492 652 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 IQSEC3Q9UPP2 1182 aaPredicted RBP10.89□□□□□ -0.67
UBE3C-205ENST00000470408 PRC1O43663 620 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 A1BGP04217 495 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 NMIQ13287 307 aaPredicted RBP10.89□□□□□ -0.67
UBE3C-205ENST00000470408 LARGE2Q8N3Y3 721 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 TAF4BQ92750 862 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 SYNMO15061 1565 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 A0A1B0GUL7 405 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 CLCN1P35523 988 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 CFAP100Q494V2 611 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 FSIP1Q8NA03 581 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 ALG1Q9BT22 464 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 ZBTB7BO15156 539 aaPredicted RBP10.89□□□□□ -0.67
UBE3C-205ENST00000470408 TNNI3KQ59H18 835 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 DHX32Q7L7V1 743 aaKnown RBP10.89□□□□□ -0.67
UBE3C-205ENST00000470408 NIM1KQ8IY84 436 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 TMEM87BQ96K49 555 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 ARHGEF10LQ9HCE6 1279 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 TRIM35Q9UPQ4 493 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 FPGT-TNNI3KV9GXZ4 949 aa10.89□□□□□ -0.67
UBE3C-205ENST00000470408 SPDYE3A6NKU9 549 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 GIGYF1O75420 1035 aaPredicted RBP10.88□□□□□ -0.67
UBE3C-205ENST00000470408 APPBP2Q92624 585 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 GOLGA6L10A6NI86 522 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 RIMBP2O15034 1052 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 RPS8P62241 208 aaKnown RBP10.88□□□□□ -0.67
UBE3C-205ENST00000470408 SPA17Q15506 151 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 TMCO3Q6UWJ1 677 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 GBP3Q9H0R5 595 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 SAMM50Q9Y512 469 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 KIF1BO60333 1816 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 GOLGA6L7A0A1B0GV03 622 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 SYCE3A1L190 88 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 CCDC172P0C7W6 258 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 ATP2B4P23634 1241 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 NAPAP54920 295 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 TNFAIP1Q13829 316 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 ATL3Q6DD88 541 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 HELBQ8NG08 1087 aaPredicted RBP10.88□□□□□ -0.67
UBE3C-205ENST00000470408 PNMA2Q9UL42 364 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 IL6STP40189 918 aaPredicted RBP10.88□□□□□ -0.67
UBE3C-205ENST00000470408 MPNDQ8N594 471 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 UBXN4Q92575 508 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 PICK1Q9NRD5 415 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 ROBO2Q9HCK4 1378 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 CACNA2D4Q7Z3S7 1137 aa10.88□□□□□ -0.67
UBE3C-205ENST00000470408 TSPOAP1O95153 1857 aa10.87□□□□□ -0.67
UBE3C-205ENST00000470408 NEMFO60524 1076 aa10.87□□□□□ -0.67
UBE3C-205ENST00000470408 HCLS1P14317 486 aaPredicted RBP10.87□□□□□ -0.67
UBE3C-205ENST00000470408 STK24Q9Y6E0 443 aa10.87□□□□□ -0.67
UBE3C-205ENST00000470408 IGSF1Q8N6C5 1336 aa10.87□□□□□ -0.67
UBE3C-205ENST00000470408 ADCY10Q96PN6 1610 aa10.87□□□□□ -0.67
UBE3C-205ENST00000470408 PCCAP05165 728 aaPredicted RBP10.87□□□□□ -0.67
UBE3C-205ENST00000470408 KRT24Q2M2I5 525 aa10.87□□□□□ -0.67
UBE3C-205ENST00000470408 TMEM87AQ8NBN3 555 aa10.87□□□□□ -0.67
UBE3C-205ENST00000470408 SNX21Q969T3 373 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms