RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-209	ENST00000470247	DUOX1	Q9NRD9	1551 aa		13.83	□□□□□ -0.2
SREBF1-209	ENST00000470247	UFL1	O94874	794 aa		13.82	□□□□□ -0.2
SREBF1-209	ENST00000470247	IFIT2	P09913	472 aa	Known RBP	13.82	□□□□□ -0.2
SREBF1-209	ENST00000470247	IFIT1	P09914	478 aa	Known RBP	13.82	□□□□□ -0.2
SREBF1-209	ENST00000470247	SLC5A1	P13866	664 aa		13.82	□□□□□ -0.2
SREBF1-209	ENST00000470247	OSBPL3	Q9H4L5	887 aa		13.82	□□□□□ -0.2
SREBF1-209	ENST00000470247	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.82	□□□□□ -0.2
SREBF1-209	ENST00000470247	BCS1L	Q9Y276	419 aa		13.82	□□□□□ -0.2
SREBF1-209	ENST00000470247	CACNA1S	Q13698	1873 aa		13.82	□□□□□ -0.2
SREBF1-209	ENST00000470247	MX1	P20591	662 aa		13.81	□□□□□ -0.2
SREBF1-209	ENST00000470247	BCAM	P50895	628 aa		13.81	□□□□□ -0.2
SREBF1-209	ENST00000470247	GRIPAP1	Q4V328	841 aa		13.81	□□□□□ -0.2
SREBF1-209	ENST00000470247	CCDC93	Q567U6	631 aa		13.81	□□□□□ -0.2
SREBF1-209	ENST00000470247	TSHZ3	Q63HK5	1081 aa		13.81	□□□□□ -0.2
SREBF1-209	ENST00000470247	DPP8	Q6V1X1	898 aa	Predicted RBP	13.81	□□□□□ -0.2
SREBF1-209	ENST00000470247	RTKN2	Q8IZC4	609 aa		13.81	□□□□□ -0.2
SREBF1-209	ENST00000470247	PI4K2B	Q8TCG2	481 aa		13.81	□□□□□ -0.2
SREBF1-209	ENST00000470247	PHKA1	P46020	1223 aa		13.8	□□□□□ -0.2
SREBF1-209	ENST00000470247	GYG1	P46976	350 aa		13.8	□□□□□ -0.2
SREBF1-209	ENST00000470247	KCNJ4	P48050	445 aa		13.8	□□□□□ -0.2
SREBF1-209	ENST00000470247	RGS3	P49796	1198 aa		13.8	□□□□□ -0.2
SREBF1-209	ENST00000470247	CCDC102B	Q68D86	513 aa		13.8	□□□□□ -0.2
SREBF1-209	ENST00000470247	PSMD1	Q99460	953 aa		13.8	□□□□□ -0.2
SREBF1-209	ENST00000470247	ECHDC1	Q9NTX5	307 aa		13.8	□□□□□ -0.2
SREBF1-209	ENST00000470247	C6orf229	H3BNL8	230 aa		13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	NFKBIE	O00221	500 aa		13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	ZBTB22	O15209	634 aa		13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	YBX3	P16989	372 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	ATP5J	P18859	108 aa		13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	SCARF1	Q14162	830 aa		13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	SOGA3	Q5TF21	947 aa		13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	TMX4	Q9H1E5	349 aa	Predicted RBP	13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	TTC41P	Q6P2S7	1318 aa		13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	MED23	Q9ULK4	1368 aa		13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	SRCAP	Q6ZRS2	3230 aa		13.79	□□□□□ -0.2
SREBF1-209	ENST00000470247	ARID4A	P29374	1257 aa	Predicted RBP	13.78	□□□□□ -0.2
SREBF1-209	ENST00000470247	HIBADH	P31937	336 aa	Known RBP	13.78	□□□□□ -0.2
SREBF1-209	ENST00000470247	PRELP	P51888	382 aa		13.78	□□□□□ -0.2
SREBF1-209	ENST00000470247	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
SREBF1-209	ENST00000470247	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
SREBF1-209	ENST00000470247	AOX1	Q06278	1338 aa		13.78	□□□□□ -0.2
SREBF1-209	ENST00000470247	RIMBP2	O15034	1052 aa		13.77	□□□□□ -0.21
SREBF1-209	ENST00000470247	GSPT1	P15170	499 aa	Known RBP	13.77	□□□□□ -0.21
SREBF1-209	ENST00000470247	MCAM	P43121	646 aa		13.77	□□□□□ -0.21
SREBF1-209	ENST00000470247	KIAA2012	Q0VF49	1180 aa		13.77	□□□□□ -0.21
SREBF1-209	ENST00000470247	CCDC158	Q5M9N0	1113 aa		13.77	□□□□□ -0.21
SREBF1-209	ENST00000470247	TDRD7	Q8NHU6	1098 aa	Known RBP	13.77	□□□□□ -0.21
SREBF1-209	ENST00000470247	ARAP2	Q8WZ64	1704 aa		13.77	□□□□□ -0.21
SREBF1-209	ENST00000470247	BOLA2	Q9H3K6	86 aa		13.77	□□□□□ -0.21
SREBF1-209	ENST00000470247	CD209	Q9NNX6	404 aa		13.77	□□□□□ -0.21
SREBF1-209	ENST00000470247	LTBP3	Q9NS15	1303 aa		13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	GLRX3	O76003	335 aa	Known RBP	13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	IL1R1	P14778	569 aa		13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	WASHC4	Q2M389	1173 aa		13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	CAVIN4	Q5BKX8	364 aa		13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	TTC39A	Q5SRH9	613 aa		13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	GORAB	Q5T7V8	394 aa		13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	TTC22	Q5TAA0	569 aa		13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	SUPT20H	Q8NEM7	779 aa		13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	EYA3	Q99504	573 aa		13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	FER1L6	Q2WGJ9	1857 aa		13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	ARFGEF1	Q9Y6D6	1849 aa		13.76	□□□□□ -0.21
SREBF1-209	ENST00000470247	UQCRFS1P1	P0C7P4	283 aa		13.75	□□□□□ -0.21
SREBF1-209	ENST00000470247	RASGRF1	Q13972	1273 aa		13.75	□□□□□ -0.21
SREBF1-209	ENST00000470247	AOC3	Q16853	763 aa		13.75	□□□□□ -0.21
SREBF1-209	ENST00000470247	DOK7	Q18PE1	504 aa		13.75	□□□□□ -0.21
SREBF1-209	ENST00000470247	PI16	Q6UXB8	463 aa		13.75	□□□□□ -0.21
SREBF1-209	ENST00000470247	HAUS7	Q99871	368 aa		13.75	□□□□□ -0.21
SREBF1-209	ENST00000470247	COA1	Q9GZY4	146 aa		13.75	□□□□□ -0.21
SREBF1-209	ENST00000470247	VPS33B	Q9H267	617 aa		13.75	□□□□□ -0.21
SREBF1-209	ENST00000470247	TAOK3	Q9H2K8	898 aa		13.75	□□□□□ -0.21
SREBF1-209	ENST00000470247	HMG20B	Q9P0W2	317 aa		13.75	□□□□□ -0.21
SREBF1-209	ENST00000470247	NDUFB9	Q9Y6M9	179 aa		13.75	□□□□□ -0.21
SREBF1-209	ENST00000470247	COL1A1	P02452	1464 aa	Predicted RBP	13.74	□□□□□ -0.21
SREBF1-209	ENST00000470247	ERC2	O15083	957 aa		13.74	□□□□□ -0.21
SREBF1-209	ENST00000470247	RASSF7	Q02833	373 aa		13.74	□□□□□ -0.21
SREBF1-209	ENST00000470247	ZNF804A	Q7Z570	1209 aa		13.74	□□□□□ -0.21
SREBF1-209	ENST00000470247	EDC3	Q96F86	508 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-209	ENST00000470247	GPATCH3	Q96I76	525 aa		13.74	□□□□□ -0.21
SREBF1-209	ENST00000470247	SNRK	Q9NRH2	765 aa		13.74	□□□□□ -0.21
SREBF1-209	ENST00000470247	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.74	□□□□□ -0.21
SREBF1-209	ENST00000470247	COL4A5	P29400	1685 aa		13.74	□□□□□ -0.21
SREBF1-209	ENST00000470247	AKAP11	Q9UKA4	1901 aa		13.74	□□□□□ -0.21
SREBF1-209	ENST00000470247	YDJC	A8MPS7	323 aa		13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	PPIP5K2	O43314	1243 aa		13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	IARS	P41252	1262 aa	Known RBP	13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	ZAP70	P43403	619 aa		13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	BMP2KL	Q5H9B9	411 aa		13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	VPS37D	Q86XT2	251 aa		13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	SPATA5	Q8NB90	893 aa		13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	ANTXR1	Q9H6X2	564 aa		13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	DBNDD1	Q9H9R9	158 aa		13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	KCNQ5	Q9NR82	932 aa		13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	GNL3L	Q9NVN8	582 aa	Known RBP	13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	GOLGB1	Q14789	3259 aa	Known RBP	13.73	□□□□□ -0.21
SREBF1-209	ENST00000470247	CHD4	Q14839	1912 aa		13.72	□□□□□ -0.21
SREBF1-209	ENST00000470247	PDS5A	Q29RF7	1337 aa	Known RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms