RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 H7C1D1 291 aa11.72□□□□□ -0.53
SHROOM3-203ENST00000469923 LRRC24Q50LG9 513 aa11.72□□□□□ -0.53
SHROOM3-203ENST00000469923 RSBN1LQ6PCB5 846 aaPredicted RBP11.72□□□□□ -0.53
SHROOM3-203ENST00000469923 DPF2Q92785 391 aa11.72□□□□□ -0.53
SHROOM3-203ENST00000469923 CDC5LQ99459 802 aaKnown RBP11.72□□□□□ -0.53
SHROOM3-203ENST00000469923 EYA3Q99504 573 aa11.72□□□□□ -0.53
SHROOM3-203ENST00000469923 SRCIN1Q9C0H9 1055 aa11.72□□□□□ -0.53
SHROOM3-203ENST00000469923 BICC1Q9H694 974 aaKnown RBP11.72□□□□□ -0.53
SHROOM3-203ENST00000469923 NOB1Q9ULX3 412 aaKnown RBP11.72□□□□□ -0.53
SHROOM3-203ENST00000469923 FZD1Q9UP38 647 aa11.72□□□□□ -0.53
SHROOM3-203ENST00000469923 ZNF804BA4D1E1 1349 aa11.71□□□□□ -0.53
SHROOM3-203ENST00000469923 E9PSI1 815 aa11.71□□□□□ -0.53
SHROOM3-203ENST00000469923 G3V3G9 751 aa11.71□□□□□ -0.53
SHROOM3-203ENST00000469923 IGHMBP2P38935 993 aaKnown RBP11.71□□□□□ -0.53
SHROOM3-203ENST00000469923 GTF2IP78347 998 aa11.71□□□□□ -0.53
SHROOM3-203ENST00000469923 DCAF8Q5TAQ9 597 aa11.71□□□□□ -0.53
SHROOM3-203ENST00000469923 C9orf78Q9NZ63 289 aaPredicted RBP11.71□□□□□ -0.53
SHROOM3-203ENST00000469923 WDR33Q9C0J8 1336 aaKnown RBP11.7□□□□□ -0.54
SHROOM3-203ENST00000469923 ANKRD18BA2A2Z9 1011 aa11.7□□□□□ -0.54
SHROOM3-203ENST00000469923 USP17L3A6NCW0 530 aa11.7□□□□□ -0.54
SHROOM3-203ENST00000469923 USP17L4A6NCW7 530 aa11.7□□□□□ -0.54
SHROOM3-203ENST00000469923 RASSF10A6NK89 507 aa11.7□□□□□ -0.54
SHROOM3-203ENST00000469923 BCAR3O75815 825 aa11.7□□□□□ -0.54
SHROOM3-203ENST00000469923 ZNF280AP59817 542 aaPredicted RBP11.7□□□□□ -0.54
SHROOM3-203ENST00000469923 USP17L1Q7RTZ2 530 aa11.7□□□□□ -0.54
SHROOM3-203ENST00000469923 MPHOSPH8Q99549 860 aa11.7□□□□□ -0.54
SHROOM3-203ENST00000469923 SPEF2Q9C093 1822 aa11.7□□□□□ -0.54
SHROOM3-203ENST00000469923 CCER2I3L3R5 266 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 CAPN15O75808 1086 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 ALDH1L1O75891 902 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 SASH1O94885 1247 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 GYG1P46976 350 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 IFIT5Q13325 482 aaKnown RBP11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 KIF4BQ2VIQ3 1234 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 ANGEL2Q5VTE6 544 aaKnown RBP11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 PAXIP1Q6ZW49 1069 aaPredicted RBP11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 KRT26Q7Z3Y9 468 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 SAPCD2Q86UD0 394 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 CAPNS2Q96L46 248 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 CHMP4AQ9BY43 222 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 CD209Q9NNX6 404 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 WBP1LQ9NX94 342 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 IQSEC3Q9UPP2 1182 aaPredicted RBP11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 RIPOR2Q9Y4F9 1068 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 TLL2Q9Y6L7 1015 aa11.69□□□□□ -0.54
SHROOM3-203ENST00000469923 F8W031 263 aaPredicted RBP11.68□□□□□ -0.54
SHROOM3-203ENST00000469923 USP17L8P0C7I0 530 aa11.68□□□□□ -0.54
SHROOM3-203ENST00000469923 TTLL5Q6EMB2 1281 aa11.68□□□□□ -0.54
SHROOM3-203ENST00000469923 LDHAL6AQ6ZMR3 332 aa11.68□□□□□ -0.54
SHROOM3-203ENST00000469923 CDC37L1Q7L3B6 337 aa11.68□□□□□ -0.54
SHROOM3-203ENST00000469923 KIAA0825Q8IV33 1275 aa11.68□□□□□ -0.54
SHROOM3-203ENST00000469923 MYOZ2Q9NPC6 264 aa11.68□□□□□ -0.54
SHROOM3-203ENST00000469923 GGA3Q9NZ52 723 aa11.68□□□□□ -0.54
SHROOM3-203ENST00000469923 LEMD3Q9Y2U8 911 aa11.68□□□□□ -0.54
SHROOM3-203ENST00000469923 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.68□□□□□ -0.54
SHROOM3-203ENST00000469923 UTYO14607 1347 aa11.67□□□□□ -0.54
SHROOM3-203ENST00000469923 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
SHROOM3-203ENST00000469923 RFX5P48382 616 aaPredicted RBP11.67□□□□□ -0.54
SHROOM3-203ENST00000469923 LBX1P52954 281 aa11.67□□□□□ -0.54
SHROOM3-203ENST00000469923 RARSP54136 660 aaKnown RBP11.67□□□□□ -0.54
SHROOM3-203ENST00000469923 DIEXFQ68CQ4 756 aaKnown RBP11.67□□□□□ -0.54
SHROOM3-203ENST00000469923 PODNQ7Z5L7 613 aa11.67□□□□□ -0.54
SHROOM3-203ENST00000469923 CDCA5Q96FF9 252 aa11.67□□□□□ -0.54
SHROOM3-203ENST00000469923 FAM84BQ96KN1 310 aaPredicted RBP11.67□□□□□ -0.54
SHROOM3-203ENST00000469923 SMC4Q9NTJ3 1288 aa11.67□□□□□ -0.54
SHROOM3-203ENST00000469923 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.67□□□□□ -0.54
SHROOM3-203ENST00000469923 UBE2Q2LH0YL09 131 aa11.66□□□□□ -0.54
SHROOM3-203ENST00000469923 RPS12P25398 132 aaKnown RBP11.66□□□□□ -0.54
SHROOM3-203ENST00000469923 PRKG1Q13976 671 aa11.66□□□□□ -0.54
SHROOM3-203ENST00000469923 CCDC57Q2TAC2 916 aa11.66□□□□□ -0.54
SHROOM3-203ENST00000469923 AGBL3Q8NEM8 1001 aa11.66□□□□□ -0.54
SHROOM3-203ENST00000469923 ZC3H15Q8WU90 426 aaKnown RBP11.66□□□□□ -0.54
SHROOM3-203ENST00000469923 ANKRD2Q9GZV1 360 aa11.66□□□□□ -0.54
SHROOM3-203ENST00000469923 COA1Q9GZY4 146 aa11.66□□□□□ -0.54
SHROOM3-203ENST00000469923 CNNM1Q9NRU3 951 aa11.66□□□□□ -0.54
SHROOM3-203ENST00000469923 PA2G4Q9UQ80 394 aaKnown RBP11.66□□□□□ -0.54
SHROOM3-203ENST00000469923 MED23Q9ULK4 1368 aa11.66□□□□□ -0.54
SHROOM3-203ENST00000469923 WNT10BO00744 389 aa11.65□□□□□ -0.54
SHROOM3-203ENST00000469923 HSPA8P11142 646 aaKnown RBP11.65□□□□□ -0.54
SHROOM3-203ENST00000469923 KCNJ4P48050 445 aa11.65□□□□□ -0.54
SHROOM3-203ENST00000469923 BCAMP50895 628 aa11.65□□□□□ -0.54
SHROOM3-203ENST00000469923 RABL6Q3YEC7 729 aaPredicted RBP11.65□□□□□ -0.54
SHROOM3-203ENST00000469923 CDAN1Q8IWY9 1227 aa11.65□□□□□ -0.54
SHROOM3-203ENST00000469923 ZBED3Q96IU2 234 aaPredicted RBP11.65□□□□□ -0.54
SHROOM3-203ENST00000469923 PRMT6Q96LA8 375 aaPredicted RBP11.65□□□□□ -0.54
SHROOM3-203ENST00000469923 FAM155AB1AL88 458 aaPredicted RBP11.64□□□□□ -0.55
SHROOM3-203ENST00000469923 HUNKP57058 714 aa11.64□□□□□ -0.55
SHROOM3-203ENST00000469923 TAF7LQ5H9L4 462 aa11.64□□□□□ -0.55
SHROOM3-203ENST00000469923 STRIP1Q5VSL9 837 aa11.64□□□□□ -0.55
SHROOM3-203ENST00000469923 ATG9AQ7Z3C6 839 aa11.64□□□□□ -0.55
SHROOM3-203ENST00000469923 VGLL2Q8N8G2 317 aa11.64□□□□□ -0.55
SHROOM3-203ENST00000469923 DCPSQ96C86 337 aaKnown RBP11.64□□□□□ -0.55
SHROOM3-203ENST00000469923 MEIS3Q99687 375 aa11.64□□□□□ -0.55
SHROOM3-203ENST00000469923 MYH3P11055 1940 aa11.63□□□□□ -0.55
SHROOM3-203ENST00000469923 CLRN2A0PK11 232 aa11.63□□□□□ -0.55
SHROOM3-203ENST00000469923 IL1R1P14778 569 aa11.63□□□□□ -0.55
SHROOM3-203ENST00000469923 PTPN12Q05209 780 aaKnown RBP11.63□□□□□ -0.55
SHROOM3-203ENST00000469923 C15orf52Q6ZUT6 534 aaKnown RBP11.63□□□□□ -0.55
SHROOM3-203ENST00000469923 FBXO33Q7Z6M2 555 aa11.63□□□□□ -0.55
SHROOM3-203ENST00000469923 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms