RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 UQCRFS1P1P0C7P4 283 aa21.82■■□□□ 1.08
SMC4-211ENST00000469858 TM4SF1P30408 202 aa21.82■■□□□ 1.08
SMC4-211ENST00000469858 NEK4P51957 841 aa21.82■■□□□ 1.08
SMC4-211ENST00000469858 CCDC129Q6ZRS4 1044 aa21.82■■□□□ 1.08
SMC4-211ENST00000469858 TICAM2Q86XR7 235 aa21.82■■□□□ 1.08
SMC4-211ENST00000469858 MINPP1Q9UNW1 487 aa21.82■■□□□ 1.08
SMC4-211ENST00000469858 RBM8AQ9Y5S9 174 aaKnown RBP21.82■■□□□ 1.08
SMC4-211ENST00000469858 SNX14Q9Y5W7 946 aa21.82■■□□□ 1.08
SMC4-211ENST00000469858 PRPF40BQ6NWY9 871 aaKnown RBP21.81■■□□□ 1.08
SMC4-211ENST00000469858 MAP4K1Q92918 833 aa21.81■■□□□ 1.08
SMC4-211ENST00000469858 RNF113AO15541 343 aaKnown RBP21.81■■□□□ 1.08
SMC4-211ENST00000469858 RASEFQ8IZ41 740 aa21.81■■□□□ 1.08
SMC4-211ENST00000469858 ST5P78524 1137 aa21.8■■□□□ 1.08
SMC4-211ENST00000469858 DDR1Q08345 913 aa21.8■■□□□ 1.08
SMC4-211ENST00000469858 LRRFIP1Q32MZ4 808 aaKnown RBP21.8■■□□□ 1.08
SMC4-211ENST00000469858 ZMYM1Q5SVZ6 1142 aa21.8■■□□□ 1.08
SMC4-211ENST00000469858 COL23A1Q86Y22 540 aaPredicted RBP21.8■■□□□ 1.08
SMC4-211ENST00000469858 HELLSQ9NRZ9 838 aa21.8■■□□□ 1.08
SMC4-211ENST00000469858 NECTIN1Q15223 517 aa21.79■■□□□ 1.08
SMC4-211ENST00000469858 UPF3BQ9BZI7 483 aaKnown RBP21.79■■□□□ 1.08
SMC4-211ENST00000469858 CYP2E1P05181 493 aaPredicted RBP21.79■■□□□ 1.08
SMC4-211ENST00000469858 HSP90AA1P07900 732 aaKnown RBP21.79■■□□□ 1.08
SMC4-211ENST00000469858 POLRMTO00411 1230 aaKnown RBP21.78■■□□□ 1.08
SMC4-211ENST00000469858 BCAMP50895 628 aa21.78■■□□□ 1.08
SMC4-211ENST00000469858 HMG20BQ9P0W2 317 aa21.78■■□□□ 1.08
SMC4-211ENST00000469858 RASGRF1Q13972 1273 aa21.78■■□□□ 1.08
SMC4-211ENST00000469858 UBE4AQ14139 1066 aa21.78■■□□□ 1.08
SMC4-211ENST00000469858 TTF1Q15361 905 aaPredicted RBP21.78■■□□□ 1.08
SMC4-211ENST00000469858 CREB3L3Q68CJ9 461 aa21.78■■□□□ 1.08
SMC4-211ENST00000469858 MAST3O60307 1309 aa21.77■■□□□ 1.08
SMC4-211ENST00000469858 WTIPA6NIX2 430 aaPredicted RBP21.77■■□□□ 1.08
SMC4-211ENST00000469858 ZFYP08048 801 aaPredicted RBP21.77■■□□□ 1.08
SMC4-211ENST00000469858 SPATA5Q8NB90 893 aa21.77■■□□□ 1.08
SMC4-211ENST00000469858 ZKSCAN1P17029 563 aaPredicted RBP21.76■■□□□ 1.07
SMC4-211ENST00000469858 FLAD1Q8NFF5 587 aa21.76■■□□□ 1.07
SMC4-211ENST00000469858 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.76■■□□□ 1.075e-8■■■□□ 16.4
SMC4-211ENST00000469858 PIH1D3Q9NQM4 214 aaKnown RBP21.76■■□□□ 1.07
SMC4-211ENST00000469858 SLC27A2O14975 620 aa21.76■■□□□ 1.07
SMC4-211ENST00000469858 GRAPQ13588 217 aa21.76■■□□□ 1.07
SMC4-211ENST00000469858 WASHC4Q2M389 1173 aa21.76■■□□□ 1.07
SMC4-211ENST00000469858 GRAPLQ8TC17 118 aaPredicted RBP21.76■■□□□ 1.07
SMC4-211ENST00000469858 RPGRQ92834 1020 aaKnown RBP21.76■■□□□ 1.07
SMC4-211ENST00000469858 KCNB2Q92953 911 aa21.76■■□□□ 1.07
SMC4-211ENST00000469858 ANP32EQ9BTT0 268 aa21.76■■□□□ 1.07
SMC4-211ENST00000469858 FOXD4L1Q9NU39 408 aa21.76■■□□□ 1.07
SMC4-211ENST00000469858 DOCK2Q92608 1830 aa21.75■■□□□ 1.07
SMC4-211ENST00000469858 M0R2C6 588 aa21.75■■□□□ 1.07
SMC4-211ENST00000469858 NLGN1Q8N2Q7 840 aa21.75■■□□□ 1.07
SMC4-211ENST00000469858 OSBP2Q969R2 916 aa21.75■■□□□ 1.07
SMC4-211ENST00000469858 IDH1O75874 414 aaKnown RBP21.74■■□□□ 1.07
SMC4-211ENST00000469858 GYG1P46976 350 aa21.74■■□□□ 1.07
SMC4-211ENST00000469858 EN1Q05925 392 aaPredicted RBP21.74■■□□□ 1.07
SMC4-211ENST00000469858 EZH2Q15910 746 aaKnown RBP21.74■■□□□ 1.07
SMC4-211ENST00000469858 RNF20Q5VTR2 975 aa21.74■■□□□ 1.07
SMC4-211ENST00000469858 ANKRD2Q9GZV1 360 aa21.74■■□□□ 1.07
SMC4-211ENST00000469858 PNPLA7Q6ZV29 1317 aa21.74■■□□□ 1.07
SMC4-211ENST00000469858 ADCK5Q3MIX3 580 aa21.74■■□□□ 1.07
SMC4-211ENST00000469858 APPBP2Q92624 585 aa21.74■■□□□ 1.07
SMC4-211ENST00000469858 JAKMIP1Q96N16 626 aaKnown RBP21.74■■□□□ 1.07
SMC4-211ENST00000469858 CASTP20810 708 aaKnown RBP21.73■■□□□ 1.07
SMC4-211ENST00000469858 NBR1Q14596 966 aa21.73■■□□□ 1.07
SMC4-211ENST00000469858 CRY2Q49AN0 593 aa21.73■■□□□ 1.07
SMC4-211ENST00000469858 VPS53Q5VIR6 699 aa21.73■■□□□ 1.07
SMC4-211ENST00000469858 ZSCAN25Q6NSZ9 544 aa21.73■■□□□ 1.07
SMC4-211ENST00000469858 IQSEC3Q9UPP2 1182 aaPredicted RBP21.73■■□□□ 1.07
SMC4-211ENST00000469858 ADD2P35612 726 aa21.72■■□□□ 1.07
SMC4-211ENST00000469858 MCM2P49736 904 aa21.72■■□□□ 1.07
SMC4-211ENST00000469858 CAVIN4Q5BKX8 364 aa21.72■■□□□ 1.07
SMC4-211ENST00000469858 SLC9C2Q5TAH2 1124 aa21.72■■□□□ 1.07
SMC4-211ENST00000469858 NOL8Q76FK4 1167 aaKnown RBP21.72■■□□□ 1.07
SMC4-211ENST00000469858 U3KPZ7 1027 aaPredicted RBP21.72■■□□□ 1.07
SMC4-211ENST00000469858 ANKRD31Q8N7Z5 1873 aa21.72■■□□□ 1.07
SMC4-211ENST00000469858 ZNF804BA4D1E1 1349 aa21.72■■□□□ 1.07
SMC4-211ENST00000469858 MYH13Q9UKX3 1938 aa21.72■■□□□ 1.07
SMC4-211ENST00000469858 NRXN2Q9P2S2 1712 aa21.72■■□□□ 1.07
SMC4-211ENST00000469858 VPS37DQ86XT2 251 aa21.71■■□□□ 1.07
SMC4-211ENST00000469858 CAMKK2Q96RR4 588 aa21.71■■□□□ 1.07
SMC4-211ENST00000469858 ANO8Q9HCE9 1232 aaPredicted RBP21.71■■□□□ 1.07
SMC4-211ENST00000469858 GNL3LQ9NVN8 582 aaKnown RBP21.71■■□□□ 1.07
SMC4-211ENST00000469858 CPA1P15085 419 aa21.7■■□□□ 1.07
SMC4-211ENST00000469858 KLRK1P26718 216 aa21.7■■□□□ 1.07
SMC4-211ENST00000469858 SLC51AQ86UW1 340 aa21.7■■□□□ 1.07
SMC4-211ENST00000469858 DSCC1Q9BVC3 393 aa21.7■■□□□ 1.07
SMC4-211ENST00000469858 PUS7LQ9H0K6 701 aaKnown RBP21.7■■□□□ 1.07
SMC4-211ENST00000469858 TAF6LQ9Y6J9 622 aa21.7■■□□□ 1.07
SMC4-211ENST00000469858 HSPD1P10809 573 aaKnown RBP21.7■■□□□ 1.06
SMC4-211ENST00000469858 MSL1Q68DK7 614 aa21.7■■□□□ 1.06
SMC4-211ENST00000469858 RBM17Q96I25 401 aaKnown RBP21.7■■□□□ 1.06
SMC4-211ENST00000469858 TM6SF1Q9BZW5 370 aa21.7■■□□□ 1.06
SMC4-211ENST00000469858 CHMP5Q9NZZ3 219 aa21.7■■□□□ 1.06
SMC4-211ENST00000469858 WWC3Q9ULE0 1092 aa21.7■■□□□ 1.06
SMC4-211ENST00000469858 PDE6AP16499 860 aa21.69■■□□□ 1.06
SMC4-211ENST00000469858 IL27Q8NEV9 243 aa21.69■■□□□ 1.06
SMC4-211ENST00000469858 TMX3Q96JJ7 454 aa21.69■■□□□ 1.06
SMC4-211ENST00000469858 FAM84BQ96KN1 310 aaPredicted RBP21.69■■□□□ 1.06
SMC4-211ENST00000469858 TTC14Q96N46 770 aa21.69■■□□□ 1.06
SMC4-211ENST00000469858 RPAP1Q9BWH6 1393 aaPredicted RBP21.69■■□□□ 1.06
SMC4-211ENST00000469858 ZNF532Q9HCE3 1301 aa21.69■■□□□ 1.06
SMC4-211ENST00000469858 MMP10P09238 476 aa21.68■■□□□ 1.06
SMC4-211ENST00000469858 DDIT3P35638 169 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms