RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 ZAP70P43403 619 aa17.35■□□□□ 0.37
CBWD3-205ENST00000469687 SMARCC2Q8TAQ2 1214 aa17.35■□□□□ 0.37
CBWD3-205ENST00000469687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.35■□□□□ 0.37
CBWD3-205ENST00000469687 MYH3P11055 1940 aa17.35■□□□□ 0.37
CBWD3-205ENST00000469687 AKAP11Q9UKA4 1901 aa17.35■□□□□ 0.37
CBWD3-205ENST00000469687 MYH15Q9Y2K3 1946 aa17.35■□□□□ 0.37
CBWD3-205ENST00000469687 HMGB1P09429 215 aaKnown RBP17.35■□□□□ 0.37
CBWD3-205ENST00000469687 UVSSAQ2YD98 709 aa17.35■□□□□ 0.37
CBWD3-205ENST00000469687 NLRP10Q86W26 655 aa17.35■□□□□ 0.37
CBWD3-205ENST00000469687 TEX13AQ9BXU3 409 aaPredicted RBP17.35■□□□□ 0.37
CBWD3-205ENST00000469687 ZBTB1Q9Y2K1 713 aa17.35■□□□□ 0.37
CBWD3-205ENST00000469687 H3BQV1 296 aa17.34■□□□□ 0.37
CBWD3-205ENST00000469687 ZNF500O60304 480 aaPredicted RBP17.34■□□□□ 0.37
CBWD3-205ENST00000469687 PTMAP06454 111 aaKnown RBP17.34■□□□□ 0.37
CBWD3-205ENST00000469687 NUP98P52948 1817 aa17.34■□□□□ 0.37
CBWD3-205ENST00000469687 HAND2P61296 217 aa17.34■□□□□ 0.37
CBWD3-205ENST00000469687 WASHC4Q2M389 1173 aa17.34■□□□□ 0.37
CBWD3-205ENST00000469687 IFFO2Q5TF58 517 aa17.34■□□□□ 0.37
CBWD3-205ENST00000469687 SYTL4Q96C24 671 aaPredicted RBP17.34■□□□□ 0.37
CBWD3-205ENST00000469687 PGBD1Q96JS3 809 aa17.34■□□□□ 0.37
CBWD3-205ENST00000469687 AGXT2Q9BYV1 514 aa17.34■□□□□ 0.37
CBWD3-205ENST00000469687 GPHNQ9NQX3 736 aaPredicted RBP17.34■□□□□ 0.37
CBWD3-205ENST00000469687 AKAP2Q9Y2D5 859 aa17.34■□□□□ 0.37
CBWD3-205ENST00000469687 ANKRD36CQ5JPF3 1778 aa17.34■□□□□ 0.37
CBWD3-205ENST00000469687 LRP6O75581 1613 aa17.34■□□□□ 0.37
CBWD3-205ENST00000469687 ADCY5O95622 1261 aa17.33■□□□□ 0.37
CBWD3-205ENST00000469687 CYP19A1P11511 503 aaPredicted RBP17.33■□□□□ 0.37
CBWD3-205ENST00000469687 ITGA6P23229 1130 aa17.33■□□□□ 0.37
CBWD3-205ENST00000469687 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.37
CBWD3-205ENST00000469687 SCAND2PQ9GZW5 306 aaPredicted RBP17.33■□□□□ 0.37
CBWD3-205ENST00000469687 PUS7LQ9H0K6 701 aaKnown RBP17.33■□□□□ 0.37
CBWD3-205ENST00000469687 DACT1Q9NYF0 836 aa17.33■□□□□ 0.37
CBWD3-205ENST00000469687 NAP1L2Q9ULW6 460 aaPredicted RBP17.33■□□□□ 0.37
CBWD3-205ENST00000469687 DISP2A7MBM2 1401 aa17.33■□□□□ 0.36
CBWD3-205ENST00000469687 BCL9O00512 1426 aa17.33■□□□□ 0.36
CBWD3-205ENST00000469687 PTPDC1A2A3K4 754 aa17.33■□□□□ 0.36
CBWD3-205ENST00000469687 AP5Z1O43299 807 aa17.33■□□□□ 0.36
CBWD3-205ENST00000469687 OFD1O75665 1012 aa17.33■□□□□ 0.36
CBWD3-205ENST00000469687 RIPOR2Q9Y4F9 1068 aa17.33■□□□□ 0.36
CBWD3-205ENST00000469687 METTL24Q5JXM2 366 aa17.32■□□□□ 0.36
CBWD3-205ENST00000469687 ZNF830Q96NB3 372 aaPredicted RBP17.32■□□□□ 0.36
CBWD3-205ENST00000469687 NUP62CLQ9H1M0 184 aa17.32■□□□□ 0.36
CBWD3-205ENST00000469687 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
CBWD3-205ENST00000469687 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.32■□□□□ 0.36
CBWD3-205ENST00000469687 MCAMP43121 646 aa17.32■□□□□ 0.36
CBWD3-205ENST00000469687 CEBPZQ03701 1054 aaKnown RBP17.32■□□□□ 0.36
CBWD3-205ENST00000469687 CKAP2LQ8IYA6 745 aa17.32■□□□□ 0.36
CBWD3-205ENST00000469687 FTOQ9C0B1 505 aaKnown RBP eCLIP17.32■□□□□ 0.36
CBWD3-205ENST00000469687 KDM4AO75164 1064 aa17.31■□□□□ 0.36
CBWD3-205ENST00000469687 PDIA3P30101 505 aaKnown RBP17.31■□□□□ 0.36
CBWD3-205ENST00000469687 PLCB2Q00722 1185 aa17.31■□□□□ 0.36
CBWD3-205ENST00000469687 ATP2B3Q16720 1220 aa17.31■□□□□ 0.36
CBWD3-205ENST00000469687 LDHAL6AQ6ZMR3 332 aa17.31■□□□□ 0.36
CBWD3-205ENST00000469687 TBC1D2BQ9UPU7 963 aa17.31■□□□□ 0.36
CBWD3-205ENST00000469687 CDHR2Q9BYE9 1310 aa17.31■□□□□ 0.36
CBWD3-205ENST00000469687 NR1I2O75469 434 aa17.3■□□□□ 0.36
CBWD3-205ENST00000469687 FGAP02671 866 aa17.3■□□□□ 0.36
CBWD3-205ENST00000469687 CTSWP56202 376 aa17.3■□□□□ 0.36
CBWD3-205ENST00000469687 MAP3K11Q16584 847 aa17.3■□□□□ 0.36
CBWD3-205ENST00000469687 TICAM2Q86XR7 235 aa17.3■□□□□ 0.36
CBWD3-205ENST00000469687 LLPHQ9BRT6 129 aaKnown RBP17.3■□□□□ 0.36
CBWD3-205ENST00000469687 SALL1Q9NSC2 1324 aa17.3■□□□□ 0.36
CBWD3-205ENST00000469687 GOLGA6L4A6NEF3 574 aa17.3■□□□□ 0.36
CBWD3-205ENST00000469687 IRS4O14654 1257 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-205ENST00000469687 CCDC192P0DO97 292 aa17.3■□□□□ 0.36
CBWD3-205ENST00000469687 ADD1P35611 737 aaKnown RBP17.29■□□□□ 0.36
CBWD3-205ENST00000469687 GUCY1B3Q02153 619 aa17.29■□□□□ 0.36
CBWD3-205ENST00000469687 VGLL2Q8N8G2 317 aa17.29■□□□□ 0.36
CBWD3-205ENST00000469687 TRMT112Q9UI30 125 aaKnown RBP17.29■□□□□ 0.36
CBWD3-205ENST00000469687 MRVI1Q9Y6F6 885 aa17.29■□□□□ 0.36
CBWD3-205ENST00000469687 UBN2Q6ZU65 1347 aa17.29■□□□□ 0.36
CBWD3-205ENST00000469687 BICD2Q8TD16 824 aa17.29■□□□□ 0.36
CBWD3-205ENST00000469687 APPBP2Q92624 585 aa17.29■□□□□ 0.36
CBWD3-205ENST00000469687 TNMDQ9H2S6 317 aa17.29■□□□□ 0.36
CBWD3-205ENST00000469687 CNNM1Q9NRU3 951 aa17.29■□□□□ 0.36
CBWD3-205ENST00000469687 SLIT2O94813 1529 aa17.29■□□□□ 0.36
CBWD3-205ENST00000469687 GPAA1O43292 621 aa17.28■□□□□ 0.36
CBWD3-205ENST00000469687 MCM5P33992 734 aa17.28■□□□□ 0.36
CBWD3-205ENST00000469687 TYRO3Q06418 890 aa17.28■□□□□ 0.36
CBWD3-205ENST00000469687 ZSCAN16Q9H4T2 348 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-205ENST00000469687 COL14A1Q05707 1796 aaKnown RBP17.28■□□□□ 0.36
CBWD3-205ENST00000469687 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
CBWD3-205ENST00000469687 ZFYP08048 801 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-205ENST00000469687 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-205ENST00000469687 RAB11FIP4Q86YS3 637 aa17.28■□□□□ 0.36
CBWD3-205ENST00000469687 TTC12Q9H892 705 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-205ENST00000469687 DENND2AQ9ULE3 1009 aa17.28■□□□□ 0.36
CBWD3-205ENST00000469687 DOT1LQ8TEK3 1739 aa17.28■□□□□ 0.36
CBWD3-205ENST00000469687 COL16A1Q07092 1604 aaPredicted RBP17.27■□□□□ 0.36
CBWD3-205ENST00000469687 NKX2-3Q8TAU0 364 aa17.27■□□□□ 0.36
CBWD3-205ENST00000469687 ZNF274Q96GC6 653 aaPredicted RBP17.27■□□□□ 0.36
CBWD3-205ENST00000469687 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.35
CBWD3-205ENST00000469687 FDPSP14324 419 aaKnown RBP17.26■□□□□ 0.35
CBWD3-205ENST00000469687 HMGN5P82970 282 aaKnown RBP17.26■□□□□ 0.35
CBWD3-205ENST00000469687 IMMTQ16891 758 aaKnown RBP17.26■□□□□ 0.35
CBWD3-205ENST00000469687 NAA16Q6N069 864 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-205ENST00000469687 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
CBWD3-205ENST00000469687 HELBQ8NG08 1087 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-205ENST00000469687 CLSTN2Q9H4D0 955 aa17.26■□□□□ 0.35
CBWD3-205ENST00000469687 CARMIL3Q8ND23 1372 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms