RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 HSPA8P11142 646 aaKnown RBP13.97□□□□□ -0.17
COL4A3-204ENST00000469504 CCT4P50991 539 aaKnown RBP13.97□□□□□ -0.17
COL4A3-204ENST00000469504 LBX1P52954 281 aa13.97□□□□□ -0.17
COL4A3-204ENST00000469504 NOGQ13253 232 aa13.97□□□□□ -0.17
COL4A3-204ENST00000469504 USP48Q86UV5 1035 aa13.97□□□□□ -0.17
COL4A3-204ENST00000469504 MPHOSPH8Q99549 860 aa13.97□□□□□ -0.17
COL4A3-204ENST00000469504 COA1Q9GZY4 146 aa13.97□□□□□ -0.17
COL4A3-204ENST00000469504 ZNF408Q9H9D4 720 aa13.97□□□□□ -0.17
COL4A3-204ENST00000469504 KCNQ5Q9NR82 932 aa13.97□□□□□ -0.17
COL4A3-204ENST00000469504 USP17L8P0C7I0 530 aa13.96□□□□□ -0.17
COL4A3-204ENST00000469504 ITGA6P23229 1130 aa13.96□□□□□ -0.17
COL4A3-204ENST00000469504 CASP7P55210 303 aa13.96□□□□□ -0.17
COL4A3-204ENST00000469504 EXOSC9Q06265 439 aaKnown RBP13.96□□□□□ -0.17
COL4A3-204ENST00000469504 STRIP1Q5VSL9 837 aa13.96□□□□□ -0.17
COL4A3-204ENST00000469504 C2orf69Q8N8R5 385 aa13.96□□□□□ -0.17
COL4A3-204ENST00000469504 GMLQ99445 158 aa13.96□□□□□ -0.17
COL4A3-204ENST00000469504 MYH3P11055 1940 aa13.96□□□□□ -0.18
COL4A3-204ENST00000469504 ABCB7O75027 752 aa13.95□□□□□ -0.18
COL4A3-204ENST00000469504 HUNKP57058 714 aa13.95□□□□□ -0.18
COL4A3-204ENST00000469504 FKBP1BP68106 108 aa13.95□□□□□ -0.18
COL4A3-204ENST00000469504 GRM1Q13255 1194 aa13.95□□□□□ -0.18
COL4A3-204ENST00000469504 RBM26Q5T8P6 1007 aaKnown RBP13.95□□□□□ -0.18
COL4A3-204ENST00000469504 OGFOD1Q8N543 542 aa13.95□□□□□ -0.18
COL4A3-204ENST00000469504 CCDC102AQ96A19 550 aa13.95□□□□□ -0.18
COL4A3-204ENST00000469504 GBA2Q9HCG7 927 aaPredicted RBP13.95□□□□□ -0.18
COL4A3-204ENST00000469504 MYOZ2Q9NPC6 264 aa13.95□□□□□ -0.18
COL4A3-204ENST00000469504 GGA3Q9NZ52 723 aa13.95□□□□□ -0.18
COL4A3-204ENST00000469504 ANKRD18BA2A2Z9 1011 aa13.94□□□□□ -0.18
COL4A3-204ENST00000469504 EGFRP00533 1210 aa13.94□□□□□ -0.18
COL4A3-204ENST00000469504 RGMBQ6NW40 437 aa13.94□□□□□ -0.18
COL4A3-204ENST00000469504 ZNF804BA4D1E1 1349 aa13.93□□□□□ -0.18
COL4A3-204ENST00000469504 SCN9AQ15858 1988 aa13.93□□□□□ -0.18
COL4A3-204ENST00000469504 PSME4Q14997 1843 aa13.93□□□□□ -0.18
COL4A3-204ENST00000469504 IFIT5Q13325 482 aaKnown RBP13.93□□□□□ -0.18
COL4A3-204ENST00000469504 SCARF1Q14162 830 aa13.93□□□□□ -0.18
COL4A3-204ENST00000469504 FAM161AQ3B820 660 aa13.93□□□□□ -0.18
COL4A3-204ENST00000469504 BEND3Q5T5X7 828 aa13.93□□□□□ -0.18
COL4A3-204ENST00000469504 REM2Q8IYK8 340 aaPredicted RBP13.93□□□□□ -0.18
COL4A3-204ENST00000469504 SALL2Q9Y467 1007 aaPredicted RBP13.93□□□□□ -0.18
COL4A3-204ENST00000469504 ADM5C9JUS6 153 aa13.92□□□□□ -0.18
COL4A3-204ENST00000469504 AOC2O75106 756 aa13.92□□□□□ -0.18
COL4A3-204ENST00000469504 ALDH1L1O75891 902 aa13.92□□□□□ -0.18
COL4A3-204ENST00000469504 KCNJ4P48050 445 aa13.92□□□□□ -0.18
COL4A3-204ENST00000469504 DACT2Q5SW24 774 aa13.92□□□□□ -0.18
COL4A3-204ENST00000469504 C15orf52Q6ZUT6 534 aaKnown RBP13.92□□□□□ -0.18
COL4A3-204ENST00000469504 CHRNDQ07001 517 aa13.91□□□□□ -0.18
COL4A3-204ENST00000469504 ANGEL2Q5VTE6 544 aaKnown RBP13.91□□□□□ -0.18
COL4A3-204ENST00000469504 FAM9BQ8IZU0 186 aa13.91□□□□□ -0.18
COL4A3-204ENST00000469504 CDCA5Q96FF9 252 aa13.91□□□□□ -0.18
COL4A3-204ENST00000469504 SAGE1Q9NXZ1 904 aa13.91□□□□□ -0.18
COL4A3-204ENST00000469504 HDAC9Q9UKV0 1011 aa13.91□□□□□ -0.18
COL4A3-204ENST00000469504 GRM8O00222 908 aa13.9□□□□□ -0.18
COL4A3-204ENST00000469504 CCDC57Q2TAC2 916 aa13.9□□□□□ -0.18
COL4A3-204ENST00000469504 TTLL5Q6EMB2 1281 aa13.9□□□□□ -0.18
COL4A3-204ENST00000469504 ZNF521Q96K83 1311 aa13.9□□□□□ -0.19
COL4A3-204ENST00000469504 FAM155AB1AL88 458 aaPredicted RBP13.89□□□□□ -0.19
COL4A3-204ENST00000469504 F6X3S4 739 aa13.89□□□□□ -0.19
COL4A3-204ENST00000469504 ZNF157P51786 506 aaPredicted RBP13.89□□□□□ -0.19
COL4A3-204ENST00000469504 FOXO4P98177 505 aa13.89□□□□□ -0.19
COL4A3-204ENST00000469504 SRCIN1Q9C0H9 1055 aa13.89□□□□□ -0.19
COL4A3-204ENST00000469504 C9orf78Q9NZ63 289 aaPredicted RBP13.89□□□□□ -0.19
COL4A3-204ENST00000469504 SLC10A3P09131 477 aa13.88□□□□□ -0.19
COL4A3-204ENST00000469504 NF2P35240 595 aa13.88□□□□□ -0.19
COL4A3-204ENST00000469504 FKBP1AP62942 108 aaKnown RBP13.88□□□□□ -0.19
COL4A3-204ENST00000469504 ZNF804AQ7Z570 1209 aa13.88□□□□□ -0.19
COL4A3-204ENST00000469504 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
COL4A3-204ENST00000469504 CD209Q9NNX6 404 aa13.88□□□□□ -0.19
COL4A3-204ENST00000469504 CHMP3Q9Y3E7 222 aa13.88□□□□□ -0.19
COL4A3-204ENST00000469504 WTIPA6NIX2 430 aaPredicted RBP13.87□□□□□ -0.19
COL4A3-204ENST00000469504 E9PSI1 815 aa13.87□□□□□ -0.19
COL4A3-204ENST00000469504 WNT10BO00744 389 aa13.87□□□□□ -0.19
COL4A3-204ENST00000469504 TAF7LQ5H9L4 462 aa13.87□□□□□ -0.19
COL4A3-204ENST00000469504 LMBR1LQ6UX01 489 aa13.87□□□□□ -0.19
COL4A3-204ENST00000469504 LDHAL6AQ6ZMR3 332 aa13.87□□□□□ -0.19
COL4A3-204ENST00000469504 APOBEC3FQ8IUX4 373 aaKnown RBP13.87□□□□□ -0.19
COL4A3-204ENST00000469504 FBXW7Q969H0 707 aa13.87□□□□□ -0.19
COL4A3-204ENST00000469504 ABHD8Q96I13 439 aa13.87□□□□□ -0.19
COL4A3-204ENST00000469504 ASTN2O75129 1339 aaPredicted RBP13.87□□□□□ -0.19
COL4A3-204ENST00000469504 PTPRCP08575 1304 aa13.87□□□□□ -0.19
COL4A3-204ENST00000469504 COL1A1P02452 1464 aaPredicted RBP13.87□□□□□ -0.19
COL4A3-204ENST00000469504 PAPPA2Q9BXP8 1791 aa13.86□□□□□ -0.19
COL4A3-204ENST00000469504 IL1R1P14778 569 aa13.86□□□□□ -0.19
COL4A3-204ENST00000469504 NBPF9Q3BBW0 867 aa13.86□□□□□ -0.19
COL4A3-204ENST00000469504 MTMR14Q8NCE2 650 aa13.86□□□□□ -0.19
COL4A3-204ENST00000469504 UTYO14607 1347 aa13.86□□□□□ -0.19
COL4A3-204ENST00000469504 IRS2Q9Y4H2 1338 aa13.86□□□□□ -0.19
COL4A3-204ENST00000469504 GTF2IP78347 998 aa13.85□□□□□ -0.19
COL4A3-204ENST00000469504 KIF23Q02241 960 aaPredicted RBP13.85□□□□□ -0.19
COL4A3-204ENST00000469504 SLC4A10Q6U841 1118 aa13.85□□□□□ -0.19
COL4A3-204ENST00000469504 DLK2Q6UY11 383 aa13.85□□□□□ -0.19
COL4A3-204ENST00000469504 CNNM1Q9NRU3 951 aa13.85□□□□□ -0.19
COL4A3-204ENST00000469504 PPP2R3BQ9Y5P8 575 aa13.85□□□□□ -0.19
COL4A3-204ENST00000469504 SPEF2Q9C093 1822 aa13.85□□□□□ -0.19
COL4A3-204ENST00000469504 KLRK1P26718 216 aa13.84□□□□□ -0.19
COL4A3-204ENST00000469504 UBE4AQ14139 1066 aa13.84□□□□□ -0.19
COL4A3-204ENST00000469504 RASAL3Q86YV0 1011 aa13.84□□□□□ -0.19
COL4A3-204ENST00000469504 KIAA0825Q8IV33 1275 aa13.84□□□□□ -0.19
COL4A3-204ENST00000469504 ZBED3Q96IU2 234 aaPredicted RBP13.84□□□□□ -0.19
COL4A3-204ENST00000469504 POLR2AP24928 1970 aaKnown RBP13.83□□□□□ -0.19
COL4A3-204ENST00000469504 MYO1BO43795 1136 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms