RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 ITGA6P23229 1130 aa10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 SF3B3Q15393 1217 aaKnown RBP10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 TAF7LQ5H9L4 462 aa10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 SSH3Q8TE77 659 aa10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 RPGRQ92834 1020 aaKnown RBP10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 ZNF594Q96JF6 807 aaPredicted RBP10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 BRIP1Q9BX63 1249 aa10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 SIL1Q9H173 461 aa10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 SEC31BQ9NQW1 1179 aa10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 PA2G4Q9UQ80 394 aaKnown RBP10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 MYH7P12883 1935 aa10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 CHD4Q14839 1912 aa10.43□□□□□ -0.74
GAPVD1-213ENST00000469498 MYO5AQ9Y4I1 1855 aaKnown RBP10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 ANKRD18BA2A2Z9 1011 aa10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 APBB1O00213 710 aa10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 PDE6BP35913 854 aa10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 RFX5P48382 616 aaPredicted RBP10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 IFIT5Q13325 482 aaKnown RBP10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 HDAC1Q13547 482 aaPredicted RBP10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 CCDC57Q2TAC2 916 aa10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 C2CD5Q86YS7 1000 aa10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 ZNF687Q8N1G0 1237 aa10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 PPP1R1BQ9UD71 204 aaPredicted RBP10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 EXOC6BQ9Y2D4 811 aa10.42□□□□□ -0.74
GAPVD1-213ENST00000469498 CHRNA5P30532 468 aa10.41□□□□□ -0.74
GAPVD1-213ENST00000469498 OS9Q13438 667 aaPredicted RBP10.41□□□□□ -0.74
GAPVD1-213ENST00000469498 CRY2Q49AN0 593 aa10.41□□□□□ -0.74
GAPVD1-213ENST00000469498 DDX46Q7L014 1031 aaKnown RBP10.41□□□□□ -0.74
GAPVD1-213ENST00000469498 RWDD1Q9H446 243 aaPredicted RBP10.41□□□□□ -0.74
GAPVD1-213ENST00000469498 KDM2BQ8NHM5 1336 aa10.4□□□□□ -0.74
GAPVD1-213ENST00000469498 SURF6O75683 361 aaKnown RBP10.4□□□□□ -0.74
GAPVD1-213ENST00000469498 PTPN12Q05209 780 aaKnown RBP10.4□□□□□ -0.74
GAPVD1-213ENST00000469498 CELF1Q92879 486 aaKnown RBP10.4□□□□□ -0.74
GAPVD1-213ENST00000469498 ZNF622Q969S3 477 aaKnown RBP eCLIP10.4□□□□□ -0.741e-11■□□□□ 10.9
GAPVD1-213ENST00000469498 RBM17Q96I25 401 aaKnown RBP10.4□□□□□ -0.74
GAPVD1-213ENST00000469498 CDC5LQ99459 802 aaKnown RBP10.4□□□□□ -0.74
GAPVD1-213ENST00000469498 PUS3Q9BZE2 481 aaKnown RBP10.4□□□□□ -0.74
GAPVD1-213ENST00000469498 BCL11AQ9H165 835 aa10.4□□□□□ -0.74
GAPVD1-213ENST00000469498 SBF1O95248 1867 aa10.4□□□□□ -0.75
GAPVD1-213ENST00000469498 DUOX1Q9NRD9 1551 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 AKAP11Q9UKA4 1901 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 DICER1Q9UPY3 1922 aaKnown RBP10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 KLRG2A4D1S0 409 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 H0YIN7 160 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 SRGNP10124 158 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 NPR1P16066 1061 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 IGHMBP2P38935 993 aaKnown RBP10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 GRAPQ13588 217 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 LRRC24Q50LG9 513 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 SLC51AQ86UW1 340 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 ANKRD18AQ8IVF6 992 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 GRAPLQ8TC17 118 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 MASTLQ96GX5 879 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 COPRSQ9NQ92 184 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 CNNM1Q9NRU3 951 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 WWC3Q9ULE0 1092 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 PSME4Q14997 1843 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 ZNF609O15014 1411 aa10.39□□□□□ -0.75
GAPVD1-213ENST00000469498 ZNF646O15015 1829 aaPredicted RBP10.38□□□□□ -0.75
GAPVD1-213ENST00000469498 A0A0G2JLW4 131 aa10.38□□□□□ -0.75
GAPVD1-213ENST00000469498 EYA2O00167 538 aa10.38□□□□□ -0.75
GAPVD1-213ENST00000469498 DPEP1P16444 411 aa10.38□□□□□ -0.75
GAPVD1-213ENST00000469498 HOXA10P31260 410 aaPredicted RBP10.38□□□□□ -0.75
GAPVD1-213ENST00000469498 G3BP1Q13283 466 aaKnown RBP eCLIP10.38□□□□□ -0.75
GAPVD1-213ENST00000469498 CENPQQ7L2Z9 268 aaPredicted RBP10.38□□□□□ -0.75
GAPVD1-213ENST00000469498 MPHOSPH8Q99549 860 aa10.38□□□□□ -0.75
GAPVD1-213ENST00000469498 DCTPP1Q9H773 170 aa10.38□□□□□ -0.75
GAPVD1-213ENST00000469498 ZSWIM6Q9HCJ5 1215 aa10.38□□□□□ -0.75
GAPVD1-213ENST00000469498 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 SMARCA5O60264 1052 aaPredicted RBP10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 STYK1Q6J9G0 422 aa10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 LDHAL6AQ6ZMR3 332 aa10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 ATG9AQ7Z3C6 839 aa10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 TIAM2Q8IVF5 1701 aa10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 SMC5Q8IY18 1101 aa10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 NLGN2Q8NFZ4 835 aa10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 GCC1Q96CN9 775 aa10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 CRAMP1Q96RY5 1269 aa10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 NOP58Q9Y2X3 529 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 DOCK2Q92608 1830 aa10.37□□□□□ -0.75
GAPVD1-213ENST00000469498 CIAO1O76071 339 aa10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 SASH1O94885 1247 aa10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 RPS8P62241 208 aaKnown RBP10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 TFCP2Q12800 502 aa10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 HSP90AB4PQ58FF6 505 aa10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 METTL24Q5JXM2 366 aa10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 PRPF40BQ6NWY9 871 aaKnown RBP10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 ERC1Q8IUD2 1116 aa10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 MICALL2Q8IY33 904 aa10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 HELBQ8NG08 1087 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 FHDC1Q9C0D6 1143 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 IL1RAPL2Q9NP60 686 aa10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 PDZRN3Q9UPQ7 1066 aa10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 CD2APQ9Y5K6 639 aa10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-213ENST00000469498 RAB11FIP3O75154 756 aa10.35□□□□□ -0.75
GAPVD1-213ENST00000469498 IL15P40933 162 aaPredicted RBP10.35□□□□□ -0.75
GAPVD1-213ENST00000469498 TGFB2P61812 414 aa10.35□□□□□ -0.75
GAPVD1-213ENST00000469498 CHRNDQ07001 517 aa10.35□□□□□ -0.75
GAPVD1-213ENST00000469498 ANKRD45Q5TZF3 282 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms