RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 LRP10Q7Z4F1 713 aa16.75■□□□□ 0.27
SMARCD3-205ENST00000469154 EDC3Q96F86 508 aaKnown RBP16.75■□□□□ 0.27
SMARCD3-205ENST00000469154 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
SMARCD3-205ENST00000469154 HAUS7Q99871 368 aa16.75■□□□□ 0.27
SMARCD3-205ENST00000469154 DACT1Q9NYF0 836 aa16.75■□□□□ 0.27
SMARCD3-205ENST00000469154 LOC102724428A0A0B4J2F2 783 aa16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 GTF2F1P35269 517 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 SIK1P57059 783 aa16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 MCMDC2Q4G0Z9 681 aa16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 FAM196AQ6ZSG2 479 aa16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 KIAA1524Q8TCG1 905 aa16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 TEX13AQ9BXU3 409 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 HSP90B1P14625 803 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 RESTQ13127 1097 aa16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 NBPF14Q5TI25 921 aa16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 NBPF10Q6P3W6 841 aaKnown RBP16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 ILDR1Q86SU0 546 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 NBPF15Q8N660 670 aa16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 ZSCAN16Q9H4T2 348 aaPredicted RBP16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 CHMP3Q9Y3E7 222 aa16.74■□□□□ 0.27
SMARCD3-205ENST00000469154 SH3TC1Q8TE82 1336 aa16.73■□□□□ 0.27
SMARCD3-205ENST00000469154 STARD3NLO95772 234 aa16.73■□□□□ 0.27
SMARCD3-205ENST00000469154 ATP6V1AP38606 617 aa16.73■□□□□ 0.27
SMARCD3-205ENST00000469154 CAMK4Q16566 473 aa16.73■□□□□ 0.27
SMARCD3-205ENST00000469154 Q6ZUG5 572 aa16.73■□□□□ 0.27
SMARCD3-205ENST00000469154 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
SMARCD3-205ENST00000469154 KCNF1Q9H3M0 494 aa16.73■□□□□ 0.27
SMARCD3-205ENST00000469154 TFIP11Q9UBB9 837 aaKnown RBP16.73■□□□□ 0.27
SMARCD3-205ENST00000469154 TICAM2Q86XR7 235 aa16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 C17orf53Q8N3J3 647 aaPredicted RBP16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 BRF1Q92994 677 aa16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 DNAJC2Q99543 621 aaKnown RBP16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 SPEF2Q9C093 1822 aa16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 H3BQV1 296 aa16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 JAK2O60674 1132 aa16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 IFFO2Q5TF58 517 aa16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 BICD2Q8TD16 824 aa16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 LLPHQ9BRT6 129 aaKnown RBP16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 NUP188Q5SRE5 1749 aa16.72■□□□□ 0.27
SMARCD3-205ENST00000469154 ANO6Q4KMQ2 910 aa16.71■□□□□ 0.27
SMARCD3-205ENST00000469154 SPC24Q8NBT2 197 aa16.71■□□□□ 0.27
SMARCD3-205ENST00000469154 CBX8Q9HC52 389 aa16.71■□□□□ 0.27
SMARCD3-205ENST00000469154 CYP21A2P08686 494 aa16.71■□□□□ 0.27
SMARCD3-205ENST00000469154 CYP19A1P11511 503 aaPredicted RBP16.71■□□□□ 0.27
SMARCD3-205ENST00000469154 KCNQ4P56696 695 aa16.71■□□□□ 0.27
SMARCD3-205ENST00000469154 CKAP2LQ8IYA6 745 aa16.71■□□□□ 0.27
SMARCD3-205ENST00000469154 KBTBD3Q8NAB2 608 aa16.71■□□□□ 0.27
SMARCD3-205ENST00000469154 TDRD7Q8NHU6 1098 aaKnown RBP16.71■□□□□ 0.27
SMARCD3-205ENST00000469154 CFAP45Q9UL16 551 aa16.71■□□□□ 0.27
SMARCD3-205ENST00000469154 ZNF330Q9Y3S2 320 aaPredicted RBP16.71■□□□□ 0.27
SMARCD3-205ENST00000469154 A0A087WZG4 1122 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 TRIM37O94972 964 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 CAVIN2O95810 425 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 CCDC129Q6ZRS4 1044 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 LUZP1Q86V48 1076 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 SMARCC2Q8TAQ2 1214 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 PYCARDQ9ULZ3 195 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 TJP1Q07157 1748 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 NHSQ6T4R5 1651 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 PFKFB2O60825 505 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 CASP7P55210 303 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 ITPK1Q13572 414 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
SMARCD3-205ENST00000469154 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
SMARCD3-205ENST00000469154 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
SMARCD3-205ENST00000469154 KIF3AQ9Y496 699 aa16.69■□□□□ 0.26
SMARCD3-205ENST00000469154 BTAF1O14981 1849 aa16.69■□□□□ 0.26
SMARCD3-205ENST00000469154 NAA16Q6N069 864 aaPredicted RBP16.69■□□□□ 0.26
SMARCD3-205ENST00000469154 DDX46Q7L014 1031 aaKnown RBP16.69■□□□□ 0.26
SMARCD3-205ENST00000469154 GPR108Q9NPR9 543 aa16.69■□□□□ 0.26
SMARCD3-205ENST00000469154 SBF2Q86WG5 1849 aa16.69■□□□□ 0.26
SMARCD3-205ENST00000469154 FGD1P98174 961 aa16.68■□□□□ 0.26
SMARCD3-205ENST00000469154 SEC62Q99442 399 aaKnown RBP16.68■□□□□ 0.26
SMARCD3-205ENST00000469154 NDUFB9Q9Y6M9 179 aa16.68■□□□□ 0.26
SMARCD3-205ENST00000469154 NR1I2O75469 434 aa16.68■□□□□ 0.26
SMARCD3-205ENST00000469154 SCRN1Q12765 414 aa16.68■□□□□ 0.26
SMARCD3-205ENST00000469154 DHX32Q7L7V1 743 aaKnown RBP16.68■□□□□ 0.26
SMARCD3-205ENST00000469154 DSCC1Q9BVC3 393 aa16.68■□□□□ 0.26
SMARCD3-205ENST00000469154 ZBTB1Q9Y2K1 713 aa16.68■□□□□ 0.26
SMARCD3-205ENST00000469154 ATP5J2-PTCD1G3V325 749 aa16.67■□□□□ 0.26
SMARCD3-205ENST00000469154 PTGS1P23219 599 aa16.67■□□□□ 0.26
SMARCD3-205ENST00000469154 ZNF75DP51815 510 aa16.67■□□□□ 0.26
SMARCD3-205ENST00000469154 PLA2G4DQ86XP0 818 aa16.67■□□□□ 0.26
SMARCD3-205ENST00000469154 LMBR1LQ6UX01 489 aa16.67■□□□□ 0.26
SMARCD3-205ENST00000469154 TTLL7Q6ZT98 887 aa16.67■□□□□ 0.26
SMARCD3-205ENST00000469154 STOX1Q6ZVD7 989 aa16.67■□□□□ 0.26
SMARCD3-205ENST00000469154 DDX11Q96FC9 970 aa16.67■□□□□ 0.26
SMARCD3-205ENST00000469154 CTAGE5O15320 804 aa16.66■□□□□ 0.26
SMARCD3-205ENST00000469154 NSUN7Q8NE18 718 aaKnown RBP16.66■□□□□ 0.26
SMARCD3-205ENST00000469154 CHMP4CQ96CF2 233 aa16.66■□□□□ 0.26
SMARCD3-205ENST00000469154 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
SMARCD3-205ENST00000469154 H7C1W4 665 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms