RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 PHKA1P46020 1223 aa18.14■□□□□ 0.49
CRAMP1-206ENST00000468839 SCARF1Q14162 830 aa18.14■□□□□ 0.49
CRAMP1-206ENST00000468839 ILDR1Q86SU0 546 aaPredicted RBP18.14■□□□□ 0.49
CRAMP1-206ENST00000468839 IL17RAQ96F46 866 aa18.14■□□□□ 0.49
CRAMP1-206ENST00000468839 LSG1Q9H089 658 aaKnown RBP18.14■□□□□ 0.49
CRAMP1-206ENST00000468839 ANO2Q9NQ90 1003 aa18.14■□□□□ 0.49
CRAMP1-206ENST00000468839 NDUFB9Q9Y6M9 179 aa18.14■□□□□ 0.49
CRAMP1-206ENST00000468839 SNAP23O00161 211 aa18.13■□□□□ 0.49
CRAMP1-206ENST00000468839 BBOX1O75936 387 aa18.13■□□□□ 0.49
CRAMP1-206ENST00000468839 MMP10P09238 476 aa18.13■□□□□ 0.49
CRAMP1-206ENST00000468839 ZAP70P43403 619 aa18.13■□□□□ 0.49
CRAMP1-206ENST00000468839 LRRFIP1Q32MZ4 808 aaKnown RBP18.13■□□□□ 0.49
CRAMP1-206ENST00000468839 KIAA1211Q6ZU35 1233 aa18.13■□□□□ 0.49
CRAMP1-206ENST00000468839 CACNA1SQ13698 1873 aa18.13■□□□□ 0.49
CRAMP1-206ENST00000468839 COL11A2P13942 1736 aaPredicted RBP18.12■□□□□ 0.49
CRAMP1-206ENST00000468839 MCCP23508 829 aa18.12■□□□□ 0.49
CRAMP1-206ENST00000468839 FKBP4Q02790 459 aaKnown RBP eCLIP18.12■□□□□ 0.49
CRAMP1-206ENST00000468839 TTF1Q15361 905 aaPredicted RBP18.12■□□□□ 0.49
CRAMP1-206ENST00000468839 FAM227BQ96M60 508 aa18.12■□□□□ 0.49
CRAMP1-206ENST00000468839 MED23Q9ULK4 1368 aa18.12■□□□□ 0.49
CRAMP1-206ENST00000468839 A0A0D9SFI3 127 aa18.11■□□□□ 0.49
CRAMP1-206ENST00000468839 ANAPC15P60006 121 aa18.11■□□□□ 0.49
CRAMP1-206ENST00000468839 ZMYM1Q5SVZ6 1142 aa18.11■□□□□ 0.49
CRAMP1-206ENST00000468839 TMC4Q7Z404 712 aa18.11■□□□□ 0.49
CRAMP1-206ENST00000468839 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
CRAMP1-206ENST00000468839 HELLSQ9NRZ9 838 aa18.11■□□□□ 0.49
CRAMP1-206ENST00000468839 ZNF804BA4D1E1 1349 aa18.11■□□□□ 0.49
CRAMP1-206ENST00000468839 CCDC88AQ3V6T2 1871 aa18.11■□□□□ 0.49
CRAMP1-206ENST00000468839 RNF113AO15541 343 aaKnown RBP18.1■□□□□ 0.49
CRAMP1-206ENST00000468839 ZFYP08048 801 aaPredicted RBP18.1■□□□□ 0.49
CRAMP1-206ENST00000468839 PDE6BP35913 854 aa18.1■□□□□ 0.49
CRAMP1-206ENST00000468839 BECN1Q14457 450 aa18.1■□□□□ 0.49
CRAMP1-206ENST00000468839 SLC16A10Q8TF71 515 aa18.1■□□□□ 0.49
CRAMP1-206ENST00000468839 SNX21Q969T3 373 aa18.1■□□□□ 0.49
CRAMP1-206ENST00000468839 HMG20BQ9P0W2 317 aa18.1■□□□□ 0.49
CRAMP1-206ENST00000468839 LEMD3Q9Y2U8 911 aa18.1■□□□□ 0.49
CRAMP1-206ENST00000468839 LTBP1Q14766 1721 aa18.09■□□□□ 0.49
CRAMP1-206ENST00000468839 CCDC171Q6TFL3 1326 aa18.09■□□□□ 0.49
CRAMP1-206ENST00000468839 CYP2E1P05181 493 aaPredicted RBP18.09■□□□□ 0.49
CRAMP1-206ENST00000468839 HSPA4P34932 840 aa18.09■□□□□ 0.49
CRAMP1-206ENST00000468839 BCAMP50895 628 aa18.09■□□□□ 0.49
CRAMP1-206ENST00000468839 RABEP1Q15276 862 aa18.09■□□□□ 0.49
CRAMP1-206ENST00000468839 MCMDC2Q4G0Z9 681 aa18.09■□□□□ 0.49
CRAMP1-206ENST00000468839 FBXO33Q7Z6M2 555 aa18.09■□□□□ 0.49
CRAMP1-206ENST00000468839 IL27Q8NEV9 243 aa18.09■□□□□ 0.49
CRAMP1-206ENST00000468839 FAM84BQ96KN1 310 aaPredicted RBP18.09■□□□□ 0.49
CRAMP1-206ENST00000468839 IRS2Q9Y4H2 1338 aa18.08■□□□□ 0.49
CRAMP1-206ENST00000468839 SRGNP10124 158 aa18.08■□□□□ 0.48
CRAMP1-206ENST00000468839 NPR1P16066 1061 aa18.08■□□□□ 0.48
CRAMP1-206ENST00000468839 CAVIN4Q5BKX8 364 aa18.08■□□□□ 0.48
CRAMP1-206ENST00000468839 MSL1Q68DK7 614 aa18.08■□□□□ 0.48
CRAMP1-206ENST00000468839 ZSCAN25Q6NSZ9 544 aa18.08■□□□□ 0.48
CRAMP1-206ENST00000468839 C15orf52Q6ZUT6 534 aaKnown RBP18.08■□□□□ 0.48
CRAMP1-206ENST00000468839 SPATA5Q8NB90 893 aa18.08■□□□□ 0.48
CRAMP1-206ENST00000468839 MAP4K1Q92918 833 aa18.08■□□□□ 0.48
CRAMP1-206ENST00000468839 KCNB2Q92953 911 aa18.08■□□□□ 0.48
CRAMP1-206ENST00000468839 GNL3LQ9NVN8 582 aaKnown RBP18.08■□□□□ 0.48
CRAMP1-206ENST00000468839 XDHP47989 1333 aa18.07■□□□□ 0.48
CRAMP1-206ENST00000468839 KCNJ4P48050 445 aa18.07■□□□□ 0.48
CRAMP1-206ENST00000468839 PTH1RQ03431 593 aa18.07■□□□□ 0.48
CRAMP1-206ENST00000468839 RASGRF1Q13972 1273 aa18.07■□□□□ 0.48
CRAMP1-206ENST00000468839 PI16Q6UXB8 463 aa18.07■□□□□ 0.48
CRAMP1-206ENST00000468839 SP8Q8IXZ3 490 aa18.07■□□□□ 0.48
CRAMP1-206ENST00000468839 KIF13BQ9NQT8 1826 aa18.07■□□□□ 0.48
CRAMP1-206ENST00000468839 DLEC1Q9Y238 1755 aa18.07■□□□□ 0.48
CRAMP1-206ENST00000468839 WTIPA6NIX2 430 aaPredicted RBP18.06■□□□□ 0.48
CRAMP1-206ENST00000468839 SEMA3EO15041 775 aa18.06■□□□□ 0.48
CRAMP1-206ENST00000468839 ALDH1B1P30837 517 aa18.06■□□□□ 0.48
CRAMP1-206ENST00000468839 TBC1D2Q9BYX2 928 aa18.06■□□□□ 0.48
CRAMP1-206ENST00000468839 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.06■□□□□ 0.48
CRAMP1-206ENST00000468839 PODXL2Q9NZ53 605 aa18.06■□□□□ 0.48
CRAMP1-206ENST00000468839 PDS5AQ29RF7 1337 aaKnown RBP18.05■□□□□ 0.48
CRAMP1-206ENST00000468839 ATP2B4P23634 1241 aa18.05■□□□□ 0.48
CRAMP1-206ENST00000468839 ADD2P35612 726 aa18.05■□□□□ 0.48
CRAMP1-206ENST00000468839 GYG1P46976 350 aa18.05■□□□□ 0.48
CRAMP1-206ENST00000468839 NECTIN1Q15223 517 aa18.05■□□□□ 0.48
CRAMP1-206ENST00000468839 ZNF589Q86UQ0 364 aaPredicted RBP18.05■□□□□ 0.48
CRAMP1-206ENST00000468839 APPBP2Q92624 585 aa18.05■□□□□ 0.48
CRAMP1-206ENST00000468839 MASTLQ96GX5 879 aa18.05■□□□□ 0.48
CRAMP1-206ENST00000468839 PIH1D3Q9NQM4 214 aaKnown RBP18.05■□□□□ 0.48
CRAMP1-206ENST00000468839 DAXXQ9UER7 740 aaPredicted RBP18.05■□□□□ 0.48
CRAMP1-206ENST00000468839 DENND2AQ9ULE3 1009 aa18.05■□□□□ 0.48
CRAMP1-206ENST00000468839 CHGBP05060 677 aa18.04■□□□□ 0.48
CRAMP1-206ENST00000468839 HIBADHP31937 336 aaKnown RBP18.04■□□□□ 0.48
CRAMP1-206ENST00000468839 UBE3CQ15386 1083 aa18.04■□□□□ 0.48
CRAMP1-206ENST00000468839 SEC62Q99442 399 aaKnown RBP18.04■□□□□ 0.48
CRAMP1-206ENST00000468839 ANKIB1Q9P2G1 1089 aa18.04■□□□□ 0.48
CRAMP1-206ENST00000468839 LAMA4Q16363 1823 aa18.04■□□□□ 0.48
CRAMP1-206ENST00000468839 SLX4Q8IY92 1834 aa18.04■□□□□ 0.48
CRAMP1-206ENST00000468839 KIAA1551Q9HCM1 1747 aa18.03■□□□□ 0.48
CRAMP1-206ENST00000468839 GPSM2P81274 684 aa18.03■□□□□ 0.48
CRAMP1-206ENST00000468839 STYK1Q6J9G0 422 aa18.03■□□□□ 0.48
CRAMP1-206ENST00000468839 PALD1Q9ULE6 856 aa18.03■□□□□ 0.48
CRAMP1-206ENST00000468839 ATP6V0A2Q9Y487 856 aa18.03■□□□□ 0.48
CRAMP1-206ENST00000468839 RBM8AQ9Y5S9 174 aaKnown RBP18.03■□□□□ 0.48
CRAMP1-206ENST00000468839 PPEF1O14829 653 aaPredicted RBP18.02■□□□□ 0.48
CRAMP1-206ENST00000468839 VPS37DQ86XT2 251 aa18.02■□□□□ 0.48
CRAMP1-206ENST00000468839 OSBP2Q969R2 916 aa18.02■□□□□ 0.48
CRAMP1-206ENST00000468839 DSCC1Q9BVC3 393 aa18.02■□□□□ 0.48
CRAMP1-206ENST00000468839 SNX14Q9Y5W7 946 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms