RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 DICER1Q9UPY3 1922 aaKnown RBP13.86□□□□□ -0.19
MSH5-214ENST00000468602 A0A1B0GUL7 405 aa13.86□□□□□ -0.19
MSH5-214ENST00000468602 SEMA3EO15041 775 aa13.86□□□□□ -0.19
MSH5-214ENST00000468602 TAF5LO75529 589 aa13.86□□□□□ -0.19
MSH5-214ENST00000468602 SLC5A1P13866 664 aa13.86□□□□□ -0.19
MSH5-214ENST00000468602 YBX3P16989 372 aaKnown RBP eCLIP13.86□□□□□ -0.19
MSH5-214ENST00000468602 TICAM2Q86XR7 235 aa13.86□□□□□ -0.19
MSH5-214ENST00000468602 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
MSH5-214ENST00000468602 SBF1O95248 1867 aa13.86□□□□□ -0.19
MSH5-214ENST00000468602 AOX1Q06278 1338 aa13.86□□□□□ -0.19
MSH5-214ENST00000468602 TTC41PQ6P2S7 1318 aa13.86□□□□□ -0.19
MSH5-214ENST00000468602 IL1R1P14778 569 aa13.85□□□□□ -0.19
MSH5-214ENST00000468602 ARID4AP29374 1257 aaPredicted RBP13.85□□□□□ -0.19
MSH5-214ENST00000468602 ANKRD45Q5TZF3 282 aa13.85□□□□□ -0.19
MSH5-214ENST00000468602 OLFM4Q6UX06 510 aa13.85□□□□□ -0.19
MSH5-214ENST00000468602 HELBQ8NG08 1087 aaPredicted RBP13.85□□□□□ -0.19
MSH5-214ENST00000468602 FAM84BQ96KN1 310 aaPredicted RBP13.85□□□□□ -0.19
MSH5-214ENST00000468602 COA1Q9GZY4 146 aa13.85□□□□□ -0.19
MSH5-214ENST00000468602 TAOK3Q9H2K8 898 aa13.85□□□□□ -0.19
MSH5-214ENST00000468602 DBNLQ9UJU6 430 aaKnown RBP13.85□□□□□ -0.19
MSH5-214ENST00000468602 UFL1O94874 794 aa13.84□□□□□ -0.19
MSH5-214ENST00000468602 WASHC4Q2M389 1173 aa13.84□□□□□ -0.19
MSH5-214ENST00000468602 PODNQ7Z5L7 613 aa13.84□□□□□ -0.19
MSH5-214ENST00000468602 SLC51AQ86UW1 340 aa13.84□□□□□ -0.19
MSH5-214ENST00000468602 XAGE2Q96GT9 111 aa13.84□□□□□ -0.19
MSH5-214ENST00000468602 ZC3H4Q9UPT8 1303 aaKnown RBP13.84□□□□□ -0.19
MSH5-214ENST00000468602 PSME4Q14997 1843 aa13.83□□□□□ -0.2
MSH5-214ENST00000468602 TIMM10P62072 90 aa13.83□□□□□ -0.2
MSH5-214ENST00000468602 B4GALNT3Q6L9W6 998 aa13.83□□□□□ -0.2
MSH5-214ENST00000468602 AACSQ86V21 672 aa13.83□□□□□ -0.2
MSH5-214ENST00000468602 TDRD7Q8NHU6 1098 aaKnown RBP13.83□□□□□ -0.2
MSH5-214ENST00000468602 ZC3H12CQ9C0D7 883 aaKnown RBP13.83□□□□□ -0.2
MSH5-214ENST00000468602 IL1RAPL2Q9NP60 686 aa13.83□□□□□ -0.2
MSH5-214ENST00000468602 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
MSH5-214ENST00000468602 AKAP11Q9UKA4 1901 aa13.82□□□□□ -0.2
MSH5-214ENST00000468602 WTIPA6NIX2 430 aaPredicted RBP13.82□□□□□ -0.2
MSH5-214ENST00000468602 UQCRFS1P1P0C7P4 283 aa13.82□□□□□ -0.2
MSH5-214ENST00000468602 ATP5JP18859 108 aa13.82□□□□□ -0.2
MSH5-214ENST00000468602 HIBADHP31937 336 aaKnown RBP13.82□□□□□ -0.2
MSH5-214ENST00000468602 IARSP41252 1262 aaKnown RBP13.82□□□□□ -0.2
MSH5-214ENST00000468602 KCNJ4P48050 445 aa13.82□□□□□ -0.2
MSH5-214ENST00000468602 FKBP1AP62942 108 aaKnown RBP13.82□□□□□ -0.2
MSH5-214ENST00000468602 CAVIN4Q5BKX8 364 aa13.82□□□□□ -0.2
MSH5-214ENST00000468602 CCDC102BQ68D86 513 aa13.82□□□□□ -0.2
MSH5-214ENST00000468602 TMED8Q6PL24 325 aaPredicted RBP13.82□□□□□ -0.2
MSH5-214ENST00000468602 ZNF804AQ7Z570 1209 aa13.82□□□□□ -0.2
MSH5-214ENST00000468602 TXNRD3Q86VQ6 643 aa13.82□□□□□ -0.2
MSH5-214ENST00000468602 FAM205AQ6ZU69 1335 aa13.82□□□□□ -0.2
MSH5-214ENST00000468602 C6orf229H3BNL8 230 aa13.81□□□□□ -0.2
MSH5-214ENST00000468602 SNAP23O00161 211 aa13.81□□□□□ -0.2
MSH5-214ENST00000468602 IFIT2P09913 472 aaKnown RBP13.81□□□□□ -0.2
MSH5-214ENST00000468602 LMNB1P20700 586 aa13.81□□□□□ -0.2
MSH5-214ENST00000468602 CCDC158Q5M9N0 1113 aa13.81□□□□□ -0.2
MSH5-214ENST00000468602 PLEKHM2Q8IWE5 1019 aa13.81□□□□□ -0.2
MSH5-214ENST00000468602 DBNDD2Q9BQY9 259 aa13.81□□□□□ -0.2
MSH5-214ENST00000468602 CD209Q9NNX6 404 aa13.81□□□□□ -0.2
MSH5-214ENST00000468602 ECHDC1Q9NTX5 307 aa13.81□□□□□ -0.2
MSH5-214ENST00000468602 GNL3LQ9NVN8 582 aaKnown RBP13.81□□□□□ -0.2
MSH5-214ENST00000468602 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
MSH5-214ENST00000468602 SALL1Q9NSC2 1324 aa13.81□□□□□ -0.2
MSH5-214ENST00000468602 ZNF646O15015 1829 aaPredicted RBP13.8□□□□□ -0.2
MSH5-214ENST00000468602 CHD4Q14839 1912 aa13.8□□□□□ -0.2
MSH5-214ENST00000468602 FZD9O00144 591 aa13.8□□□□□ -0.2
MSH5-214ENST00000468602 SMARCA5O60264 1052 aaPredicted RBP13.8□□□□□ -0.2
MSH5-214ENST00000468602 MX1P20591 662 aa13.8□□□□□ -0.2
MSH5-214ENST00000468602 KLRK1P26718 216 aa13.8□□□□□ -0.2
MSH5-214ENST00000468602 PDE4AP27815 886 aa13.8□□□□□ -0.2
MSH5-214ENST00000468602 ADORA1P30542 326 aa13.8□□□□□ -0.2
MSH5-214ENST00000468602 MMP14P50281 582 aa13.8□□□□□ -0.2
MSH5-214ENST00000468602 PRELPP51888 382 aa13.8□□□□□ -0.2
MSH5-214ENST00000468602 PDE1AP54750 535 aa13.8□□□□□ -0.2
MSH5-214ENST00000468602 PI4K2BQ8TCG2 481 aa13.8□□□□□ -0.2
MSH5-214ENST00000468602 COL4A5P29400 1685 aa13.79□□□□□ -0.2
MSH5-214ENST00000468602 ERC2O15083 957 aa13.79□□□□□ -0.2
MSH5-214ENST00000468602 GLRX3O76003 335 aaKnown RBP13.79□□□□□ -0.2
MSH5-214ENST00000468602 SLC34A2O95436 690 aa13.79□□□□□ -0.2
MSH5-214ENST00000468602 PHKA1P46020 1223 aa13.79□□□□□ -0.2
MSH5-214ENST00000468602 BCAMP50895 628 aa13.79□□□□□ -0.2
MSH5-214ENST00000468602 GPATCH3Q96I76 525 aa13.79□□□□□ -0.2
MSH5-214ENST00000468602 NEUROD6Q96NK8 337 aa13.79□□□□□ -0.2
MSH5-214ENST00000468602 LNPKQ9C0E8 428 aa13.79□□□□□ -0.2
MSH5-214ENST00000468602 CCDC8Q9H0W5 538 aaPredicted RBP13.79□□□□□ -0.2
MSH5-214ENST00000468602 TLR7Q9NYK1 1049 aaKnown RBP13.79□□□□□ -0.2
MSH5-214ENST00000468602 DENND2AQ9ULE3 1009 aa13.79□□□□□ -0.2
MSH5-214ENST00000468602 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
MSH5-214ENST00000468602 SUGT1Q9Y2Z0 365 aa13.79□□□□□ -0.2
MSH5-214ENST00000468602 PPIP5K2O43314 1243 aa13.78□□□□□ -0.2
MSH5-214ENST00000468602 GYG1P46976 350 aa13.78□□□□□ -0.2
MSH5-214ENST00000468602 GPR162Q16538 588 aa13.78□□□□□ -0.2
MSH5-214ENST00000468602 STRIP1Q5VSL9 837 aa13.78□□□□□ -0.2
MSH5-214ENST00000468602 C16orf71Q8IYS4 520 aaPredicted RBP13.78□□□□□ -0.2
MSH5-214ENST00000468602 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
MSH5-214ENST00000468602 CCDC88AQ3V6T2 1871 aa13.78□□□□□ -0.2
MSH5-214ENST00000468602 SCN9AQ15858 1988 aa13.78□□□□□ -0.2
MSH5-214ENST00000468602 APBB1O00213 710 aa13.77□□□□□ -0.21
MSH5-214ENST00000468602 RASGRF1Q13972 1273 aa13.77□□□□□ -0.21
MSH5-214ENST00000468602 AOC3Q16853 763 aa13.77□□□□□ -0.21
MSH5-214ENST00000468602 ARHGAP27Q6ZUM4 889 aa13.77□□□□□ -0.21
MSH5-214ENST00000468602 LARGE2Q8N3Y3 721 aa13.77□□□□□ -0.21
MSH5-214ENST00000468602 OTUD7AQ8TE49 926 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms